RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 A0A1W2PNM2 257 aa7.61□□□□□ -1.19
SMPD4-213ENST00000454468 EPM2AB3EWF7 344 aa7.61□□□□□ -1.19
SMPD4-213ENST00000454468 KRTAP7-1Q8IUC3 87 aa7.61□□□□□ -1.19
SMPD4-213ENST00000454468 TLX1NBP0CAT3 122 aa7.61□□□□□ -1.19
SMPD4-213ENST00000454468 TMEM254Q8TBM7 123 aa7.61□□□□□ -1.19
SMPD4-213ENST00000454468 NUPR2A6NF83 97 aa7.61□□□□□ -1.19
SMPD4-213ENST00000454468 ATP5EP56381 51 aaPredicted RBP7.6□□□□□ -1.19
SMPD4-213ENST00000454468 CXCL6P80162 114 aa7.6□□□□□ -1.19
SMPD4-213ENST00000454468 H0Y9J4 135 aa7.6□□□□□ -1.19
SMPD4-213ENST00000454468 RPL37AP61513 92 aaKnown RBP7.6□□□□□ -1.19
SMPD4-213ENST00000454468 KLKP1Q107X0 134 aa7.59□□□□□ -1.19
SMPD4-213ENST00000454468 COL7A1Q02388 2944 aa7.59□□□□□ -1.19
SMPD4-213ENST00000454468 SMIM29Q86T20 159 aa7.59□□□□□ -1.2
SMPD4-213ENST00000454468 Q8NBF4 154 aa7.58□□□□□ -1.2
SMPD4-213ENST00000454468 CD164Q04900 197 aa7.57□□□□□ -1.2
SMPD4-213ENST00000454468 ANAPC11Q9NYG5 84 aa7.57□□□□□ -1.2
SMPD4-213ENST00000454468 PANO1I0J062 215 aa7.55□□□□□ -1.2
SMPD4-213ENST00000454468 K7EQZ3 153 aa7.55□□□□□ -1.2
SMPD4-213ENST00000454468 IGFL1Q6UW32 110 aa7.55□□□□□ -1.2
SMPD4-213ENST00000454468 KRTAP11-1Q8IUC1 163 aa7.54□□□□□ -1.2
SMPD4-213ENST00000454468 IGKV4-1P06312 121 aa7.54□□□□□ -1.2
SMPD4-213ENST00000454468 PLA2G2DQ9UNK4 145 aa7.54□□□□□ -1.2
SMPD4-213ENST00000454468 SPINK6Q6UWN8 80 aa7.53□□□□□ -1.2
SMPD4-213ENST00000454468 C9orf163Q8N9P6 203 aa7.53□□□□□ -1.2
SMPD4-213ENST00000454468 NDUFS5O43920 106 aa7.53□□□□□ -1.2
SMPD4-213ENST00000454468 IGLV5-48A0A075B6I7 105 aa7.52□□□□□ -1.21
SMPD4-213ENST00000454468 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.52□□□□□ -1.21
SMPD4-213ENST00000454468 IGLV5-52A0A0A0MRZ9 124 aa7.51□□□□□ -1.21
SMPD4-213ENST00000454468 KRTAP4-16G5E9R7 235 aaPredicted RBP7.51□□□□□ -1.21
SMPD4-213ENST00000454468 CHKB-CPT1BH3BT56 60 aa7.5□□□□□ -1.21
SMPD4-213ENST00000454468 SPRR1AP35321 89 aa7.5□□□□□ -1.21
SMPD4-213ENST00000454468 CNBPP62633 177 aaKnown RBP7.5□□□□□ -1.21
SMPD4-213ENST00000454468 IGLV5-37A0A075B6J1 123 aa7.5□□□□□ -1.21
SMPD4-213ENST00000454468 RTL8CO15255 209 aa7.49□□□□□ -1.21
SMPD4-213ENST00000454468 CDK2AP2O75956 126 aa7.49□□□□□ -1.21
SMPD4-213ENST00000454468 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
SMPD4-213ENST00000454468 PRR15Q8IV56 129 aa7.48□□□□□ -1.21
SMPD4-213ENST00000454468 A8MUN3 132 aa7.48□□□□□ -1.21
SMPD4-213ENST00000454468 C1orf134Q5TEV5 83 aa7.47□□□□□ -1.21
SMPD4-213ENST00000454468 A0A087WTM6 91 aa7.47□□□□□ -1.21
SMPD4-213ENST00000454468 RBM12B-AS1Q9P1G2 102 aa7.46□□□□□ -1.22
SMPD4-213ENST00000454468 MOBPQ13875 183 aa7.45□□□□□ -1.22
SMPD4-213ENST00000454468 HCG22E2RYF7 251 aa7.45□□□□□ -1.22
SMPD4-213ENST00000454468 HUWE1Q7Z6Z7 4374 aaKnown RBP7.45□□□□□ -1.22
SMPD4-213ENST00000454468 BCE1O60756 84 aa7.45□□□□□ -1.22
SMPD4-213ENST00000454468 NDUFB1O75438 58 aa7.44□□□□□ -1.22
SMPD4-213ENST00000454468 LINC00208Q96KT6 92 aa7.44□□□□□ -1.22
SMPD4-213ENST00000454468 DSCR10P59022 87 aa7.44□□□□□ -1.22
SMPD4-213ENST00000454468 CIRBP-AS1Q8TBR5 109 aa7.44□□□□□ -1.22
SMPD4-213ENST00000454468 A6NED7 52 aa7.43□□□□□ -1.22
SMPD4-213ENST00000454468 MP68P56378 58 aa7.43□□□□□ -1.22
SMPD4-213ENST00000454468 TRAV22A0A0B4J277 110 aa7.42□□□□□ -1.22
SMPD4-213ENST00000454468 CASC2Q6XLA1 102 aa7.42□□□□□ -1.22
SMPD4-213ENST00000454468 IGHV6-1A0A0B4J1U7 121 aa7.41□□□□□ -1.22
SMPD4-213ENST00000454468 LYSTQ99698 3801 aa7.41□□□□□ -1.22
SMPD4-213ENST00000454468 PSORS1C2Q9UIG4 136 aa7.41□□□□□ -1.22
SMPD4-213ENST00000454468 DNAH10Q8IVF4 4471 aa7.41□□□□□ -1.22
SMPD4-213ENST00000454468 A8MU10 97 aa7.41□□□□□ -1.22
SMPD4-213ENST00000454468 TNP2Q05952 138 aa7.41□□□□□ -1.22
SMPD4-213ENST00000454468 C1orf64Q8NEQ6 169 aa7.41□□□□□ -1.22
SMPD4-213ENST00000454468 PRR15LQ9BU68 103 aa7.4□□□□□ -1.22
SMPD4-213ENST00000454468 SPRR4Q96PI1 79 aa7.38□□□□□ -1.23
SMPD4-213ENST00000454468 KTN1-AS1Q86SY8 53 aa7.38□□□□□ -1.23
SMPD4-213ENST00000454468 OCR1Q9BZK8 76 aa7.38□□□□□ -1.23
SMPD4-213ENST00000454468 FBN3Q75N90 2809 aa7.37□□□□□ -1.23
SMPD4-213ENST00000454468 hDV103S1A0JD37 113 aa7.36□□□□□ -1.23
SMPD4-213ENST00000454468 H3BS24 57 aa7.35□□□□□ -1.23
SMPD4-213ENST00000454468 PCOTHQ58A44 107 aa7.35□□□□□ -1.23
SMPD4-213ENST00000454468 SPACA4Q8TDM5 124 aa7.34□□□□□ -1.23
SMPD4-213ENST00000454468 RETNLBQ9BQ08 111 aa7.34□□□□□ -1.23
SMPD4-213ENST00000454468 MEGF8Q7Z7M0 2845 aa7.34□□□□□ -1.23
SMPD4-213ENST00000454468 Q6ZRN7 208 aaPredicted RBP7.34□□□□□ -1.23
SMPD4-213ENST00000454468 H0Y9P7 68 aa7.33□□□□□ -1.24
SMPD4-213ENST00000454468 CMYA5Q8N3K9 4069 aa7.32□□□□□ -1.24
SMPD4-213ENST00000454468 A0A1B0GW54 56 aa7.31□□□□□ -1.24
SMPD4-213ENST00000454468 ZNF706Q9Y5V0 76 aaPredicted RBP7.31□□□□□ -1.24
SMPD4-213ENST00000454468 Q1T7F1 81 aa7.29□□□□□ -1.24
SMPD4-213ENST00000454468 ZNF861PO60384 105 aa7.29□□□□□ -1.24
SMPD4-213ENST00000454468 A8MWP4 228 aa7.29□□□□□ -1.24
SMPD4-213ENST00000454468 KRTAP10-2P60368 255 aa7.28□□□□□ -1.24
SMPD4-213ENST00000454468 DNAH9Q9NYC9 4486 aa7.26□□□□□ -1.25
SMPD4-213ENST00000454468 PLECQ15149 4684 aaKnown RBP7.25□□□□□ -1.25
SMPD4-213ENST00000454468 IGLV7-43P04211 117 aa7.23□□□□□ -1.25
SMPD4-213ENST00000454468 WWC2-AS2Q96NR7 200 aa7.23□□□□□ -1.25
SMPD4-213ENST00000454468 Q5VV11 94 aa7.22□□□□□ -1.25
SMPD4-213ENST00000454468 IGLV8-61A0A075B6I0 122 aa7.22□□□□□ -1.25
SMPD4-213ENST00000454468 Q6ZR54 194 aa7.22□□□□□ -1.25
SMPD4-213ENST00000454468 LINC00472Q9H8W2 130 aa7.22□□□□□ -1.25
SMPD4-213ENST00000454468 SMR3BP02814 79 aaPredicted RBP7.21□□□□□ -1.25
SMPD4-213ENST00000454468 SPRR1BP22528 89 aa7.2□□□□□ -1.26
SMPD4-213ENST00000454468 C8orf87E5RJ46 101 aa7.2□□□□□ -1.26
SMPD4-213ENST00000454468 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
SMPD4-213ENST00000454468 LIMD2Q9BT23 127 aa7.2□□□□□ -1.26
SMPD4-213ENST00000454468 ATP11AUNQ6ZP68 121 aa7.19□□□□□ -1.26
SMPD4-213ENST00000454468 DNAH7Q8WXX0 4024 aa7.19□□□□□ -1.26
SMPD4-213ENST00000454468 C8orf17Q9NRJ1 99 aa7.19□□□□□ -1.26
SMPD4-213ENST00000454468 PLAC8Q9NZF1 115 aa7.19□□□□□ -1.26
SMPD4-213ENST00000454468 DNHD1Q96M86 4753 aa7.18□□□□□ -1.26
SMPD4-213ENST00000454468 PRAC1Q96KF2 57 aa7.18□□□□□ -1.26
SMPD4-213ENST00000454468 PRKDCP78527 4128 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms