RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 C10orf25Q5T742 122 aa6.32□□□□□ -1.4
CCDC171-203ENST00000449575 LINC00474Q9P2X8 69 aa6.32□□□□□ -1.4
CCDC171-203ENST00000449575 CNBPP62633 177 aaKnown RBP6.32□□□□□ -1.4
CCDC171-203ENST00000449575 Q6ZRU5 148 aa6.32□□□□□ -1.4
CCDC171-203ENST00000449575 MRPL55Q7Z7F7 128 aaKnown RBP6.32□□□□□ -1.4
CCDC171-203ENST00000449575 C9orf163Q8N9P6 203 aa6.32□□□□□ -1.4
CCDC171-203ENST00000449575 PANO1I0J062 215 aa6.31□□□□□ -1.4
CCDC171-203ENST00000449575 RYR1P21817 5038 aa6.31□□□□□ -1.4
CCDC171-203ENST00000449575 LINC00575Q6W349 94 aa6.31□□□□□ -1.4
CCDC171-203ENST00000449575 Q8IZM0 81 aa6.31□□□□□ -1.4
CCDC171-203ENST00000449575 COX17Q14061 63 aa6.3□□□□□ -1.4
CCDC171-203ENST00000449575 NREPQ16612 68 aa6.3□□□□□ -1.4
CCDC171-203ENST00000449575 UNQ6190/PRO20217Q6UXQ8 127 aa6.3□□□□□ -1.4
CCDC171-203ENST00000449575 TMEM254Q8TBM7 123 aa6.3□□□□□ -1.4
CCDC171-203ENST00000449575 CAMK2N2Q96S95 79 aa6.3□□□□□ -1.4
CCDC171-203ENST00000449575 CHTF8P0CG12 524 aa6.29□□□□□ -1.4
CCDC171-203ENST00000449575 SYCNQ0VAF6 134 aa6.29□□□□□ -1.4
CCDC171-203ENST00000449575 KRTAP17-1Q9BYP8 105 aa6.29□□□□□ -1.4
CCDC171-203ENST00000449575 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-203ENST00000449575 FAT1Q14517 4588 aa6.29□□□□□ -1.4
CCDC171-203ENST00000449575 C6orf99Q4VX62 202 aa6.29□□□□□ -1.4
CCDC171-203ENST00000449575 C9orf116Q5BN46 136 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-203ENST00000449575 C6orf48Q9UBA6 75 aa6.28□□□□□ -1.4
CCDC171-203ENST00000449575 BPY2O14599 106 aa6.27□□□□□ -1.41
CCDC171-203ENST00000449575 Q6ZSA8 131 aa6.27□□□□□ -1.41
CCDC171-203ENST00000449575 PRYO14603 147 aa6.27□□□□□ -1.41
CCDC171-203ENST00000449575 A0A096LNI7 61 aa6.26□□□□□ -1.41
CCDC171-203ENST00000449575 IGKV2-24A0A0C4DH68 120 aa6.26□□□□□ -1.41
CCDC171-203ENST00000449575 MPLKIPQ8TAP9 179 aa6.26□□□□□ -1.41
CCDC171-203ENST00000449575 PRR15Q8IV56 129 aa6.26□□□□□ -1.41
CCDC171-203ENST00000449575 PRR3P79522 188 aaKnown RBP6.24□□□□□ -1.41
CCDC171-203ENST00000449575 SCXQ7RTU7 201 aa6.24□□□□□ -1.41
CCDC171-203ENST00000449575 Q6ZRP5 223 aa6.24□□□□□ -1.41
CCDC171-203ENST00000449575 CIRBP-AS1Q8TBR5 109 aa6.24□□□□□ -1.41
CCDC171-203ENST00000449575 HERC2O95714 4834 aa6.24□□□□□ -1.41
CCDC171-203ENST00000449575 FAM229BQ4G0N7 80 aa6.23□□□□□ -1.41
CCDC171-203ENST00000449575 CDK2AP2O75956 126 aa6.23□□□□□ -1.41
CCDC171-203ENST00000449575 SMR3BP02814 79 aaPredicted RBP6.23□□□□□ -1.41
CCDC171-203ENST00000449575 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.22□□□□□ -1.41
CCDC171-203ENST00000449575 SPACA4Q8TDM5 124 aa6.22□□□□□ -1.41
CCDC171-203ENST00000449575 Q6ZQY7 126 aa6.22□□□□□ -1.41
CCDC171-203ENST00000449575 VPS13BQ7Z7G8 4022 aa6.21□□□□□ -1.42
CCDC171-203ENST00000449575 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.42
CCDC171-203ENST00000449575 RBM12B-AS1Q9P1G2 102 aa6.21□□□□□ -1.42
CCDC171-203ENST00000449575 FAM168BA1KXE4 195 aa6.2□□□□□ -1.42
CCDC171-203ENST00000449575 OCR1Q9BZK8 76 aa6.2□□□□□ -1.42
CCDC171-203ENST00000449575 COX7BP24311 80 aa6.2□□□□□ -1.42
CCDC171-203ENST00000449575 A0A1W2PNN7 141 aa6.19□□□□□ -1.42
CCDC171-203ENST00000449575 TLX1NBP0CAT3 122 aa6.19□□□□□ -1.42
CCDC171-203ENST00000449575 Q1T7F1 81 aa6.19□□□□□ -1.42
CCDC171-203ENST00000449575 KRTAP7-1Q8IUC3 87 aa6.19□□□□□ -1.42
CCDC171-203ENST00000449575 XAGE1AQ9HD64 81 aa6.19□□□□□ -1.42
CCDC171-203ENST00000449575 C8orf87E5RJ46 101 aa6.19□□□□□ -1.42
CCDC171-203ENST00000449575 IGLV6-57P01721 117 aa6.19□□□□□ -1.42
CCDC171-203ENST00000449575 KRTAP4-5Q9BYR2 181 aa6.19□□□□□ -1.42
CCDC171-203ENST00000449575 DIRC1Q969H9 104 aa6.18□□□□□ -1.42
CCDC171-203ENST00000449575 hDV103S1A0JD37 113 aa6.17□□□□□ -1.42
CCDC171-203ENST00000449575 IGKV4-1P06312 121 aa6.17□□□□□ -1.42
CCDC171-203ENST00000449575 PLAC8Q9NZF1 115 aa6.17□□□□□ -1.42
CCDC171-203ENST00000449575 Q8NDZ9 215 aa6.15□□□□□ -1.43
CCDC171-203ENST00000449575 HIGD2AQ9BW72 106 aa6.15□□□□□ -1.43
CCDC171-203ENST00000449575 ABCA13Q86UQ4 5058 aa6.15□□□□□ -1.43
CCDC171-203ENST00000449575 PHF5AQ7RTV0 110 aaKnown RBP6.14□□□□□ -1.43
CCDC171-203ENST00000449575 LINC00528Q8N1L1 170 aa6.14□□□□□ -1.43
CCDC171-203ENST00000449575 KRTAP11-1Q8IUC1 163 aa6.13□□□□□ -1.43
CCDC171-203ENST00000449575 Q8N1X5 172 aa6.13□□□□□ -1.43
CCDC171-203ENST00000449575 J3QL48 77 aa6.13□□□□□ -1.43
CCDC171-203ENST00000449575 A0A1B0GW54 56 aa6.12□□□□□ -1.43
CCDC171-203ENST00000449575 ZNF73O43830 326 aaPredicted RBP6.12□□□□□ -1.43
CCDC171-203ENST00000449575 ELOF1P60002 83 aaKnown RBP6.12□□□□□ -1.43
CCDC171-203ENST00000449575 Q5VSD8 79 aa6.12□□□□□ -1.43
CCDC171-203ENST00000449575 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
CCDC171-203ENST00000449575 KRTAP10-4P60372 401 aaPredicted RBP6.11□□□□□ -1.43
CCDC171-203ENST00000449575 Q8N9L7 120 aa6.11□□□□□ -1.43
CCDC171-203ENST00000449575 C1orf64Q8NEQ6 169 aa6.11□□□□□ -1.43
CCDC171-203ENST00000449575 FLG2Q5D862 2391 aaPredicted RBP6.1□□□□□ -1.43
CCDC171-203ENST00000449575 CYP4F30PQ9H0H9 118 aa6.1□□□□□ -1.43
CCDC171-203ENST00000449575 MYCBP2O75592 4640 aa6.08□□□□□ -1.44
CCDC171-203ENST00000449575 TRAV22A0A0B4J277 110 aa6.08□□□□□ -1.44
CCDC171-203ENST00000449575 FAM229AH3BQW9 127 aa6.08□□□□□ -1.44
CCDC171-203ENST00000449575 NDUFB1O75438 58 aa6.07□□□□□ -1.44
CCDC171-203ENST00000449575 SMIM29Q86T20 159 aa6.07□□□□□ -1.44
CCDC171-203ENST00000449575 ZCCHC13Q8WW36 166 aaKnown RBP6.07□□□□□ -1.44
CCDC171-203ENST00000449575 PLA2G2DQ9UNK4 145 aa6.07□□□□□ -1.44
CCDC171-203ENST00000449575 RPL37AP8A6NKH3 93 aa6.07□□□□□ -1.44
CCDC171-203ENST00000449575 RPL37AP61513 92 aaKnown RBP6.07□□□□□ -1.44
CCDC171-203ENST00000449575 UBE2BP63146 152 aa6.07□□□□□ -1.44
CCDC171-203ENST00000449575 ETDCA0A1B0GVM5 59 aa6.06□□□□□ -1.44
CCDC171-203ENST00000449575 C7orf33Q8WU49 177 aa6.06□□□□□ -1.44
CCDC171-203ENST00000449575 PSORS1C2Q9UIG4 136 aa6.06□□□□□ -1.44
CCDC171-203ENST00000449575 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
CCDC171-203ENST00000449575 PKHD1L1Q86WI1 4243 aa6.06□□□□□ -1.44
CCDC171-203ENST00000449575 M0R378 163 aa6.05□□□□□ -1.44
CCDC171-203ENST00000449575 PSPHP1O15172 72 aa6.05□□□□□ -1.44
CCDC171-203ENST00000449575 IGLV5-37A0A075B6J1 123 aa6.05□□□□□ -1.44
CCDC171-203ENST00000449575 NKAPP1Q8N9T2 125 aa6.04□□□□□ -1.44
CCDC171-203ENST00000449575 PLA2G1BP04054 148 aaKnown RBP6.03□□□□□ -1.44
CCDC171-203ENST00000449575 UBE2AP49459 152 aa6.03□□□□□ -1.44
CCDC171-203ENST00000449575 C1orf137Q5JT78 98 aa6.02□□□□□ -1.45
CCDC171-203ENST00000449575 IGLV5-48A0A075B6I7 105 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms