RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 H3BQ85 93 aa5.73□□□□□ -1.49
LINC00642-203ENST00000444942 TMEM256-PLSCR3K7ERE1 68 aa5.73□□□□□ -1.49
LINC00642-203ENST00000444942 KRTAP9-7A8MTY7 169 aa5.72□□□□□ -1.49
LINC00642-203ENST00000444942 ACYP1P07311 99 aa5.72□□□□□ -1.49
LINC00642-203ENST00000444942 ELOF1P60002 83 aaKnown RBP5.72□□□□□ -1.49
LINC00642-203ENST00000444942 JMJD7-PLA2G4BH0Y9G9 81 aa5.71□□□□□ -1.5
LINC00642-203ENST00000444942 GHRHP01286 108 aa5.71□□□□□ -1.5
LINC00642-203ENST00000444942 KRTAP7-1Q8IUC3 87 aa5.71□□□□□ -1.5
LINC00642-203ENST00000444942 PRYO14603 147 aa5.7□□□□□ -1.5
LINC00642-203ENST00000444942 UBE2BP63146 152 aa5.7□□□□□ -1.5
LINC00642-203ENST00000444942 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.7□□□□□ -1.5
LINC00642-203ENST00000444942 OBSCN-AS1Q96MR7 158 aa5.7□□□□□ -1.5
LINC00642-203ENST00000444942 KCNQ1DNQ9H478 68 aa5.7□□□□□ -1.5
LINC00642-203ENST00000444942 SCGB1A1P11684 91 aa5.69□□□□□ -1.5
LINC00642-203ENST00000444942 PCP4P48539 62 aa5.69□□□□□ -1.5
LINC00642-203ENST00000444942 C1orf137Q5JT78 98 aa5.69□□□□□ -1.5
LINC00642-203ENST00000444942 GAGE2AQ6NT46 116 aa5.69□□□□□ -1.5
LINC00642-203ENST00000444942 Q6ZQY7 126 aa5.69□□□□□ -1.5
LINC00642-203ENST00000444942 KRTAP11-1Q8IUC1 163 aa5.69□□□□□ -1.5
LINC00642-203ENST00000444942 C14orf132Q9NPU4 83 aa5.69□□□□□ -1.5
LINC00642-203ENST00000444942 PSORS1C2Q9UIG4 136 aa5.69□□□□□ -1.5
LINC00642-203ENST00000444942 MT-ATP8P03928 68 aa5.68□□□□□ -1.5
LINC00642-203ENST00000444942 A0A1B0GV72 72 aa5.67□□□□□ -1.5
LINC00642-203ENST00000444942 MRPL55Q7Z7F7 128 aaKnown RBP5.67□□□□□ -1.5
LINC00642-203ENST00000444942 IGLV1-50A0A075B6I6 118 aa5.67□□□□□ -1.5
LINC00642-203ENST00000444942 ETDCA0A1B0GVM5 59 aa5.67□□□□□ -1.5
LINC00642-203ENST00000444942 RPL37AP8A6NKH3 93 aa5.67□□□□□ -1.5
LINC00642-203ENST00000444942 LCE2BO14633 110 aa5.67□□□□□ -1.5
LINC00642-203ENST00000444942 LAMTOR3Q9UHA4 124 aa5.67□□□□□ -1.5
LINC00642-203ENST00000444942 CCKP06307 115 aa5.65□□□□□ -1.51
LINC00642-203ENST00000444942 SPRR1AP35321 89 aa5.65□□□□□ -1.51
LINC00642-203ENST00000444942 RBM3P98179 157 aaKnown RBP5.65□□□□□ -1.51
LINC00642-203ENST00000444942 DHRS4-AS1Q9P1J3 65 aa5.65□□□□□ -1.51
LINC00642-203ENST00000444942 Q6ZRX8 168 aa5.64□□□□□ -1.51
LINC00642-203ENST00000444942 B5MCH6 92 aa5.63□□□□□ -1.51
LINC00642-203ENST00000444942 IGLV7-43P04211 117 aa5.63□□□□□ -1.51
LINC00642-203ENST00000444942 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
LINC00642-203ENST00000444942 C21orf62-AS1Q17RA5 79 aa5.63□□□□□ -1.51
LINC00642-203ENST00000444942 Q6Q795 121 aa5.63□□□□□ -1.51
LINC00642-203ENST00000444942 REG3GQ6UW15 175 aa5.63□□□□□ -1.51
LINC00642-203ENST00000444942 LINC00643Q86TS7 51 aa5.63□□□□□ -1.51
LINC00642-203ENST00000444942 DSCR8Q96T75 97 aa5.63□□□□□ -1.51
LINC00642-203ENST00000444942 LOC110117498A0A087WWA1 95 aa5.62□□□□□ -1.51
LINC00642-203ENST00000444942 KRTAP4-16G5E9R7 235 aaPredicted RBP5.62□□□□□ -1.51
LINC00642-203ENST00000444942 PDE6GP18545 87 aa5.62□□□□□ -1.51
LINC00642-203ENST00000444942 SPINK6Q6UWN8 80 aa5.62□□□□□ -1.51
LINC00642-203ENST00000444942 SMCR5Q8TEV8 140 aa5.62□□□□□ -1.51
LINC00642-203ENST00000444942 NDUFV3P56181 108 aaKnown RBP5.61□□□□□ -1.51
LINC00642-203ENST00000444942 Q6ZQT0 140 aa5.61□□□□□ -1.51
LINC00642-203ENST00000444942 TRBV7-7A0A0K0K1E9 115 aa5.6□□□□□ -1.51
LINC00642-203ENST00000444942 Q6JHZ5 121 aa5.59□□□□□ -1.51
LINC00642-203ENST00000444942 Q9BRP9 147 aa5.59□□□□□ -1.51
LINC00642-203ENST00000444942 LINC00846Q9NV44 126 aa5.59□□□□□ -1.51
LINC00642-203ENST00000444942 FAM19A1Q7Z5A9 133 aa5.58□□□□□ -1.52
LINC00642-203ENST00000444942 DEFB105AQ8NG35 78 aa5.58□□□□□ -1.52
LINC00642-203ENST00000444942 IMUPQ9GZP8 106 aa5.58□□□□□ -1.52
LINC00642-203ENST00000444942 TRBV7-4A0A0J9YYF1 115 aa5.57□□□□□ -1.52
LINC00642-203ENST00000444942 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
LINC00642-203ENST00000444942 BCE1O60756 84 aa5.57□□□□□ -1.52
LINC00642-203ENST00000444942 UBE2AP49459 152 aa5.57□□□□□ -1.52
LINC00642-203ENST00000444942 UBL5Q9BZL1 73 aa5.57□□□□□ -1.52
LINC00642-203ENST00000444942 IGLV5-48A0A075B6I7 105 aa5.56□□□□□ -1.52
LINC00642-203ENST00000444942 H0Y9J4 135 aa5.56□□□□□ -1.52
LINC00642-203ENST00000444942 Q8N377 158 aa5.56□□□□□ -1.52
LINC00642-203ENST00000444942 ZNF861PO60384 105 aa5.55□□□□□ -1.52
LINC00642-203ENST00000444942 LINC01547P58512 204 aaPredicted RBP5.55□□□□□ -1.52
LINC00642-203ENST00000444942 PRLHP81277 87 aa5.55□□□□□ -1.52
LINC00642-203ENST00000444942 ATP5EP2Q5VTU8 51 aa5.55□□□□□ -1.52
LINC00642-203ENST00000444942 ST20-AS1Q8NBB2 130 aa5.55□□□□□ -1.52
LINC00642-203ENST00000444942 IGKV3D-7A0A0C4DH55 119 aa5.54□□□□□ -1.52
LINC00642-203ENST00000444942 ERC2-IT1O76042 136 aa5.54□□□□□ -1.52
LINC00642-203ENST00000444942 PRR26Q8N8Z3 221 aa5.54□□□□□ -1.52
LINC00642-203ENST00000444942 F8WEM9 126 aa5.53□□□□□ -1.52
LINC00642-203ENST00000444942 ANAPC13Q9BS18 74 aa5.53□□□□□ -1.52
LINC00642-203ENST00000444942 HIGD2AQ9BW72 106 aa5.53□□□□□ -1.52
LINC00642-203ENST00000444942 ANAPC11Q9NYG5 84 aa5.52□□□□□ -1.53
LINC00642-203ENST00000444942 FAM236AA0A1B0GUQ0 79 aa5.51□□□□□ -1.53
LINC00642-203ENST00000444942 FAM236BA0A1B0GV22 79 aa5.51□□□□□ -1.53
LINC00642-203ENST00000444942 Q6ZVQ6 151 aa5.51□□□□□ -1.53
LINC00642-203ENST00000444942 C3orf22Q8N5N4 141 aa5.51□□□□□ -1.53
LINC00642-203ENST00000444942 KRTAP1-4P0C5Y4 121 aa5.5□□□□□ -1.53
LINC00642-203ENST00000444942 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
LINC00642-203ENST00000444942 A0A1B0GW54 56 aa5.49□□□□□ -1.53
LINC00642-203ENST00000444942 HIST1H4AP62805 103 aaKnown RBP5.48□□□□□ -1.53
LINC00642-203ENST00000444942 SPRR1BP22528 89 aa5.47□□□□□ -1.53
LINC00642-203ENST00000444942 SMIM29Q86T20 159 aa5.47□□□□□ -1.53
LINC00642-203ENST00000444942 Q8NBF4 154 aa5.47□□□□□ -1.53
LINC00642-203ENST00000444942 A0A087X002 238 aa5.46□□□□□ -1.54
LINC00642-203ENST00000444942 CXCL6P80162 114 aa5.46□□□□□ -1.54
LINC00642-203ENST00000444942 A0A1W2PNM2 257 aa5.45□□□□□ -1.54
LINC00642-203ENST00000444942 ATOX1O00244 68 aa5.45□□□□□ -1.54
LINC00642-203ENST00000444942 NREPQ16612 68 aa5.45□□□□□ -1.54
LINC00642-203ENST00000444942 IGLV8-61A0A075B6I0 122 aa5.44□□□□□ -1.54
LINC00642-203ENST00000444942 A0A087WVE0 104 aa5.44□□□□□ -1.54
LINC00642-203ENST00000444942 TYMSOSQ8TAI1 123 aa5.44□□□□□ -1.54
LINC00642-203ENST00000444942 ZNF706Q9Y5V0 76 aaPredicted RBP5.44□□□□□ -1.54
LINC00642-203ENST00000444942 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
LINC00642-203ENST00000444942 CRYGAP11844 174 aa5.43□□□□□ -1.54
LINC00642-203ENST00000444942 IGFL1Q6UW32 110 aa5.43□□□□□ -1.54
LINC00642-203ENST00000444942 SPRR4Q96PI1 79 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms