RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 WIPF1O43516 503 aa4.18□□□□□ -1.74
CNOT1-202ENST00000441024 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
CNOT1-202ENST00000441024 USP24Q9UPU5 2620 aa4.17□□□□□ -1.74
CNOT1-202ENST00000441024 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
CNOT1-202ENST00000441024 ZNF861PO60384 105 aa4.17□□□□□ -1.74
CNOT1-202ENST00000441024 A0A087WTM6 91 aa4.17□□□□□ -1.74
CNOT1-202ENST00000441024 K7EQZ3 153 aa4.17□□□□□ -1.74
CNOT1-202ENST00000441024 OTOGQ6ZRI0 2925 aa4.16□□□□□ -1.74
CNOT1-202ENST00000441024 SPINK1P00995 79 aa4.16□□□□□ -1.74
CNOT1-202ENST00000441024 PRR15Q8IV56 129 aa4.16□□□□□ -1.74
CNOT1-202ENST00000441024 OBSCN-AS1Q96MR7 158 aa4.16□□□□□ -1.74
CNOT1-202ENST00000441024 A0A1B0GU69 56 aa4.16□□□□□ -1.74
CNOT1-202ENST00000441024 PLA2G1BP04054 148 aaKnown RBP4.16□□□□□ -1.74
CNOT1-202ENST00000441024 KLKP1Q107X0 134 aa4.16□□□□□ -1.74
CNOT1-202ENST00000441024 SPAG11AQ6PDA7 123 aa4.15□□□□□ -1.74
CNOT1-202ENST00000441024 MXRA5Q9NR99 2828 aa4.15□□□□□ -1.75
CNOT1-202ENST00000441024 C8orf17Q9NRJ1 99 aa4.15□□□□□ -1.75
CNOT1-202ENST00000441024 FLNBO75369 2602 aaKnown RBP4.15□□□□□ -1.75
CNOT1-202ENST00000441024 FAM104AQ969W3 186 aa4.14□□□□□ -1.75
CNOT1-202ENST00000441024 MTORP42345 2549 aa4.14□□□□□ -1.75
CNOT1-202ENST00000441024 A0A1B0GVX0 72 aa4.14□□□□□ -1.75
CNOT1-202ENST00000441024 FLNCQ14315 2725 aa4.14□□□□□ -1.75
CNOT1-202ENST00000441024 POLQO75417 2590 aa4.13□□□□□ -1.75
CNOT1-202ENST00000441024 SETD2Q9BYW2 2564 aaPredicted RBP4.13□□□□□ -1.75
CNOT1-202ENST00000441024 IGLV5-48A0A075B6I7 105 aa4.13□□□□□ -1.75
CNOT1-202ENST00000441024 FRAS1Q86XX4 4008 aa4.12□□□□□ -1.75
CNOT1-202ENST00000441024 Q96NJ1 140 aa4.12□□□□□ -1.75
CNOT1-202ENST00000441024 SPRR4Q96PI1 79 aa4.12□□□□□ -1.75
CNOT1-202ENST00000441024 A0A1W2PNN7 141 aa4.12□□□□□ -1.75
CNOT1-202ENST00000441024 IGLV7-43P04211 117 aa4.12□□□□□ -1.75
CNOT1-202ENST00000441024 CYP4F30PQ9H0H9 118 aa4.12□□□□□ -1.75
CNOT1-202ENST00000441024 APCP25054 2843 aa4.12□□□□□ -1.75
CNOT1-202ENST00000441024 LINC00336Q6ZUF6 198 aa4.11□□□□□ -1.75
CNOT1-202ENST00000441024 C4orf26Q17RF5 130 aa4.11□□□□□ -1.75
CNOT1-202ENST00000441024 A0A1W2PNM2 257 aa4.11□□□□□ -1.75
CNOT1-202ENST00000441024 ACANP16112 2415 aa4.1□□□□□ -1.75
CNOT1-202ENST00000441024 CR1P17927 2039 aa4.1□□□□□ -1.75
CNOT1-202ENST00000441024 CASC10Q5T4H9 136 aa4.1□□□□□ -1.75
CNOT1-202ENST00000441024 COA5Q86WW8 74 aa4.1□□□□□ -1.75
CNOT1-202ENST00000441024 LINC00304Q8N9R0 145 aa4.1□□□□□ -1.75
CNOT1-202ENST00000441024 ATP11AUNQ6ZP68 121 aa4.1□□□□□ -1.75
CNOT1-202ENST00000441024 BAHCC1Q9P281 2608 aa4.1□□□□□ -1.75
CNOT1-202ENST00000441024 DNAH6Q9C0G6 4158 aa4.09□□□□□ -1.75
CNOT1-202ENST00000441024 PSORS1C2Q9UIG4 136 aa4.09□□□□□ -1.76
CNOT1-202ENST00000441024 CD164Q04900 197 aa4.08□□□□□ -1.76
CNOT1-202ENST00000441024 SPANXA2-OT1Q8N9U9 137 aa4.08□□□□□ -1.76
CNOT1-202ENST00000441024 H7BZZ5 65 aa4.08□□□□□ -1.76
CNOT1-202ENST00000441024 DSCR10P59022 87 aa4.07□□□□□ -1.76
CNOT1-202ENST00000441024 F8P00451 2351 aa4.06□□□□□ -1.76
CNOT1-202ENST00000441024 SPRR1AP35321 89 aa4.04□□□□□ -1.76
CNOT1-202ENST00000441024 UQCR11O14957 56 aa4.03□□□□□ -1.76
CNOT1-202ENST00000441024 A0A0G2JQZ4 141 aa4.03□□□□□ -1.76
CNOT1-202ENST00000441024 A8MUN3 132 aa4.03□□□□□ -1.76
CNOT1-202ENST00000441024 OCR1Q9BZK8 76 aa4.03□□□□□ -1.76
CNOT1-202ENST00000441024 FAM229BQ4G0N7 80 aa4.02□□□□□ -1.77
CNOT1-202ENST00000441024 ZANQ9Y493 2812 aa4.02□□□□□ -1.77
CNOT1-202ENST00000441024 DNAH9Q9NYC9 4486 aa4.01□□□□□ -1.77
CNOT1-202ENST00000441024 SPRR1BP22528 89 aa4.01□□□□□ -1.77
CNOT1-202ENST00000441024 IGLV8-61A0A075B6I0 122 aa4.01□□□□□ -1.77
CNOT1-202ENST00000441024 ANAPC11Q9NYG5 84 aa4.01□□□□□ -1.77
CNOT1-202ENST00000441024 PLAC8Q9NZF1 115 aa4.01□□□□□ -1.77
CNOT1-202ENST00000441024 HECTD1Q9ULT8 2610 aa3.99□□□□□ -1.77
CNOT1-202ENST00000441024 J3QL48 77 aa3.99□□□□□ -1.77
CNOT1-202ENST00000441024 KRTAP26-1Q6PEX3 210 aa3.99□□□□□ -1.77
CNOT1-202ENST00000441024 HUWE1Q7Z6Z7 4374 aaKnown RBP3.98□□□□□ -1.77
CNOT1-202ENST00000441024 TNP2Q05952 138 aa3.98□□□□□ -1.77
CNOT1-202ENST00000441024 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-202ENST00000441024 MIR22HGQ0VDD5 57 aa3.98□□□□□ -1.77
CNOT1-202ENST00000441024 Q8NDZ9 215 aa3.97□□□□□ -1.77
CNOT1-202ENST00000441024 DNHD1Q96M86 4753 aa3.97□□□□□ -1.77
CNOT1-202ENST00000441024 C9orf92A6NGG3 77 aa3.96□□□□□ -1.77
CNOT1-202ENST00000441024 GCN1Q92616 2671 aaKnown RBP3.96□□□□□ -1.77
CNOT1-202ENST00000441024 SMR3BP02814 79 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-202ENST00000441024 HECTD4Q9Y4D8 3996 aa3.96□□□□□ -1.78
CNOT1-202ENST00000441024 IGLV7-46A0A075B6I9 117 aa3.96□□□□□ -1.78
CNOT1-202ENST00000441024 Q1T7F1 81 aa3.96□□□□□ -1.78
CNOT1-202ENST00000441024 FLNAP21333 2647 aaKnown RBP3.95□□□□□ -1.78
CNOT1-202ENST00000441024 MMP24-AS1A0A0U1RRL7 71 aa3.94□□□□□ -1.78
CNOT1-202ENST00000441024 RBM12B-AS1Q9P1G2 102 aa3.94□□□□□ -1.78
CNOT1-202ENST00000441024 NIPBLQ6KC79 2804 aaeCLIP3.94□□□□□ -1.781e-11■■■□□ 15.4
CNOT1-202ENST00000441024 PKD1P98161 4303 aa3.94□□□□□ -1.78
CNOT1-202ENST00000441024 CHD6Q8TD26 2715 aa3.93□□□□□ -1.78
CNOT1-202ENST00000441024 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
CNOT1-202ENST00000441024 LINC00472Q9H8W2 130 aa3.93□□□□□ -1.78
CNOT1-202ENST00000441024 NF1P21359 2839 aa3.92□□□□□ -1.78
CNOT1-202ENST00000441024 ITPR3Q14573 2671 aa3.92□□□□□ -1.78
CNOT1-202ENST00000441024 COL7A1Q02388 2944 aa3.92□□□□□ -1.78
CNOT1-202ENST00000441024 DNAH2Q9P225 4427 aa3.92□□□□□ -1.78
CNOT1-202ENST00000441024 HELZ2Q9BYK8 2649 aaKnown RBP3.91□□□□□ -1.78
CNOT1-202ENST00000441024 COX6B2Q6YFQ2 88 aa3.91□□□□□ -1.78
CNOT1-202ENST00000441024 CENPEQ02224 2701 aa3.9□□□□□ -1.78
CNOT1-202ENST00000441024 LINC00483Q53H64 154 aa3.9□□□□□ -1.79
CNOT1-202ENST00000441024 KRTAP1-5Q9BYS1 174 aa3.9□□□□□ -1.79
CNOT1-202ENST00000441024 HRES1P13985 223 aa3.89□□□□□ -1.79
CNOT1-202ENST00000441024 FBN1P35555 2871 aaKnown RBP3.89□□□□□ -1.79
CNOT1-202ENST00000441024 FBN3Q75N90 2809 aa3.89□□□□□ -1.79
CNOT1-202ENST00000441024 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
CNOT1-202ENST00000441024 PRR26Q8N8Z3 221 aa3.89□□□□□ -1.79
CNOT1-202ENST00000441024 FAT2Q9NYQ8 4349 aa3.89□□□□□ -1.79
CNOT1-202ENST00000441024 VPS13DQ5THJ4 4388 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms