RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 A0A1W2PNM2 257 aa5.55□□□□□ -1.52
HPS4-206ENST00000439453 PRR15Q8IV56 129 aa5.55□□□□□ -1.52
HPS4-206ENST00000439453 ZCCHC13Q8WW36 166 aaKnown RBP5.55□□□□□ -1.52
HPS4-206ENST00000439453 A0A1B0GW54 56 aa5.55□□□□□ -1.52
HPS4-206ENST00000439453 CASC10Q5T4H9 136 aa5.55□□□□□ -1.52
HPS4-206ENST00000439453 KRTAP26-1Q6PEX3 210 aa5.55□□□□□ -1.52
HPS4-206ENST00000439453 NDUFB1O75438 58 aa5.55□□□□□ -1.52
HPS4-206ENST00000439453 SPART-AS1P0CW21 52 aa5.55□□□□□ -1.52
HPS4-206ENST00000439453 C15orf56Q8N910 161 aa5.55□□□□□ -1.52
HPS4-206ENST00000439453 KCNQ1DNQ9H478 68 aa5.55□□□□□ -1.52
HPS4-206ENST00000439453 LINC00208Q96KT6 92 aa5.53□□□□□ -1.52
HPS4-206ENST00000439453 PRR15LQ9BU68 103 aa5.53□□□□□ -1.52
HPS4-206ENST00000439453 DSCR10P59022 87 aa5.53□□□□□ -1.52
HPS4-206ENST00000439453 C1orf137Q5JT78 98 aa5.53□□□□□ -1.52
HPS4-206ENST00000439453 C7orf33Q8WU49 177 aa5.53□□□□□ -1.52
HPS4-206ENST00000439453 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.52□□□□□ -1.53
HPS4-206ENST00000439453 DNAH10Q8IVF4 4471 aa5.52□□□□□ -1.53
HPS4-206ENST00000439453 Q8NBF4 154 aa5.52□□□□□ -1.53
HPS4-206ENST00000439453 NDUFS5O43920 106 aa5.52□□□□□ -1.53
HPS4-206ENST00000439453 UBE2AP49459 152 aa5.52□□□□□ -1.53
HPS4-206ENST00000439453 SERTAD4-AS1Q5TG53 156 aa5.52□□□□□ -1.53
HPS4-206ENST00000439453 FAT2Q9NYQ8 4349 aa5.51□□□□□ -1.53
HPS4-206ENST00000439453 TNP2Q05952 138 aa5.51□□□□□ -1.53
HPS4-206ENST00000439453 DHRS4-AS1Q9P1J3 65 aa5.51□□□□□ -1.53
HPS4-206ENST00000439453 K7EQZ3 153 aa5.51□□□□□ -1.53
HPS4-206ENST00000439453 TRAV22A0A0B4J277 110 aa5.51□□□□□ -1.53
HPS4-206ENST00000439453 CYP4F30PQ9H0H9 118 aa5.51□□□□□ -1.53
HPS4-206ENST00000439453 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
HPS4-206ENST00000439453 DEFB116Q30KQ4 102 aa5.5□□□□□ -1.53
HPS4-206ENST00000439453 Q6ZRX8 168 aa5.5□□□□□ -1.53
HPS4-206ENST00000439453 SPRR4Q96PI1 79 aa5.5□□□□□ -1.53
HPS4-206ENST00000439453 Q9BRP9 147 aa5.5□□□□□ -1.53
HPS4-206ENST00000439453 SYCNQ0VAF6 134 aa5.5□□□□□ -1.53
HPS4-206ENST00000439453 CDK2AP2O75956 126 aa5.49□□□□□ -1.53
HPS4-206ENST00000439453 H0Y9J4 135 aa5.49□□□□□ -1.53
HPS4-206ENST00000439453 DNAH17Q9UFH2 4485 aa5.49□□□□□ -1.53
HPS4-206ENST00000439453 RPL37AP8A6NKH3 93 aa5.49□□□□□ -1.53
HPS4-206ENST00000439453 A8MUN3 132 aa5.49□□□□□ -1.53
HPS4-206ENST00000439453 HCG22E2RYF7 251 aa5.48□□□□□ -1.53
HPS4-206ENST00000439453 C11orf45Q8TAV5 145 aa5.48□□□□□ -1.53
HPS4-206ENST00000439453 PSCAO43653 123 aa5.48□□□□□ -1.53
HPS4-206ENST00000439453 HECTD4Q9Y4D8 3996 aa5.48□□□□□ -1.53
HPS4-206ENST00000439453 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
HPS4-206ENST00000439453 A0A096LNI7 61 aa5.47□□□□□ -1.53
HPS4-206ENST00000439453 EPPK1P58107 5090 aaKnown RBP5.47□□□□□ -1.53
HPS4-206ENST00000439453 PKD1P98161 4303 aa5.46□□□□□ -1.54
HPS4-206ENST00000439453 IGLV1-50A0A075B6I6 118 aa5.45□□□□□ -1.54
HPS4-206ENST00000439453 SPRR1AP35321 89 aa5.45□□□□□ -1.54
HPS4-206ENST00000439453 APLNQ9ULZ1 77 aa5.45□□□□□ -1.54
HPS4-206ENST00000439453 PLA2G2DQ9UNK4 145 aa5.45□□□□□ -1.54
HPS4-206ENST00000439453 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
HPS4-206ENST00000439453 NUPR2A6NF83 97 aa5.45□□□□□ -1.54
HPS4-206ENST00000439453 FAM168BA1KXE4 195 aa5.44□□□□□ -1.54
HPS4-206ENST00000439453 H3BNG1 76 aa5.44□□□□□ -1.54
HPS4-206ENST00000439453 IGLV5-37A0A075B6J1 123 aa5.43□□□□□ -1.54
HPS4-206ENST00000439453 TLX1NBP0CAT3 122 aa5.43□□□□□ -1.54
HPS4-206ENST00000439453 CD164Q04900 197 aa5.43□□□□□ -1.54
HPS4-206ENST00000439453 LINC00476Q8WZB0 136 aa5.43□□□□□ -1.54
HPS4-206ENST00000439453 LIMD2Q9BT23 127 aa5.43□□□□□ -1.54
HPS4-206ENST00000439453 DEFB131BA0A096LNP1 70 aa5.42□□□□□ -1.54
HPS4-206ENST00000439453 A0A0G2JQZ4 141 aa5.42□□□□□ -1.54
HPS4-206ENST00000439453 A0A1W2PNN7 141 aa5.42□□□□□ -1.54
HPS4-206ENST00000439453 Q5VV11 94 aa5.42□□□□□ -1.54
HPS4-206ENST00000439453 H0Y9P7 68 aa5.42□□□□□ -1.54
HPS4-206ENST00000439453 LINC01556Q5JQF7 62 aa5.42□□□□□ -1.54
HPS4-206ENST00000439453 PKHD1P08F94 4074 aa5.41□□□□□ -1.54
HPS4-206ENST00000439453 A0A087WSZ3 146 aa5.41□□□□□ -1.54
HPS4-206ENST00000439453 IGKV2-24A0A0C4DH68 120 aa5.41□□□□□ -1.54
HPS4-206ENST00000439453 PCOTHQ58A44 107 aa5.41□□□□□ -1.54
HPS4-206ENST00000439453 KRTAP7-1Q8IUC3 87 aa5.41□□□□□ -1.54
HPS4-206ENST00000439453 A8MU10 97 aa5.41□□□□□ -1.54
HPS4-206ENST00000439453 IGFL1Q6UW32 110 aa5.4□□□□□ -1.54
HPS4-206ENST00000439453 CASC2Q6XLA1 102 aa5.4□□□□□ -1.55
HPS4-206ENST00000439453 SPANXA2-OT1Q8N9U9 137 aa5.39□□□□□ -1.55
HPS4-206ENST00000439453 Q8N9P0 234 aaPredicted RBP5.39□□□□□ -1.55
HPS4-206ENST00000439453 KRTAP29-1A8MX34 341 aaPredicted RBP5.38□□□□□ -1.55
HPS4-206ENST00000439453 RPL37AP61513 92 aaKnown RBP5.38□□□□□ -1.55
HPS4-206ENST00000439453 REG3GQ6UW15 175 aa5.38□□□□□ -1.55
HPS4-206ENST00000439453 DNAH5Q8TE73 4624 aa5.37□□□□□ -1.55
HPS4-206ENST00000439453 H3BPC8 53 aa5.37□□□□□ -1.55
HPS4-206ENST00000439453 SPAG11AQ6PDA7 123 aa5.36□□□□□ -1.55
HPS4-206ENST00000439453 DYNC1H1Q14204 4646 aaKnown RBP5.36□□□□□ -1.55
HPS4-206ENST00000439453 C16orf90A8MZG2 172 aa5.35□□□□□ -1.55
HPS4-206ENST00000439453 IGLV8-61A0A075B6I0 122 aa5.35□□□□□ -1.55
HPS4-206ENST00000439453 UBE2DNLQ8IWF7 75 aa5.35□□□□□ -1.55
HPS4-206ENST00000439453 DNAH10OSP0CZ25 163 aa5.35□□□□□ -1.55
HPS4-206ENST00000439453 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
HPS4-206ENST00000439453 LY6G6CO95867 125 aa5.34□□□□□ -1.55
HPS4-206ENST00000439453 LINC00588Q9Y4M8 146 aa5.34□□□□□ -1.55
HPS4-206ENST00000439453 CNBPP62633 177 aaKnown RBP5.34□□□□□ -1.56
HPS4-206ENST00000439453 C9orf163Q8N9P6 203 aa5.34□□□□□ -1.56
HPS4-206ENST00000439453 BIRC6Q9NR09 4857 aa5.34□□□□□ -1.56
HPS4-206ENST00000439453 PRLHP81277 87 aa5.32□□□□□ -1.56
HPS4-206ENST00000439453 Q6ZR54 194 aa5.32□□□□□ -1.56
HPS4-206ENST00000439453 Q75L30 129 aa5.32□□□□□ -1.56
HPS4-206ENST00000439453 LCA10Q71F78 164 aa5.31□□□□□ -1.56
HPS4-206ENST00000439453 COA5Q86WW8 74 aa5.31□□□□□ -1.56
HPS4-206ENST00000439453 A8MWP4 228 aa5.31□□□□□ -1.56
HPS4-206ENST00000439453 ATP11AUNQ6ZP68 121 aa5.31□□□□□ -1.56
HPS4-206ENST00000439453 KRTAP1-5Q9BYS1 174 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms