RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
CDC42SE1-202ENST00000439374 HCG22E2RYF7 251 aa6.37□□□□□ -1.39
CDC42SE1-202ENST00000439374 DSCR10P59022 87 aa6.37□□□□□ -1.39
CDC42SE1-202ENST00000439374 MRPL55Q7Z7F7 128 aaKnown RBP6.37□□□□□ -1.39
CDC42SE1-202ENST00000439374 H3BNG1 76 aa6.36□□□□□ -1.39
CDC42SE1-202ENST00000439374 Q8NBF4 154 aa6.35□□□□□ -1.39
CDC42SE1-202ENST00000439374 DNAH10OSP0CZ25 163 aa6.35□□□□□ -1.39
CDC42SE1-202ENST00000439374 UBE2AP49459 152 aa6.35□□□□□ -1.39
CDC42SE1-202ENST00000439374 Q6ZRX8 168 aa6.35□□□□□ -1.39
CDC42SE1-202ENST00000439374 H0Y9P7 68 aa6.35□□□□□ -1.39
CDC42SE1-202ENST00000439374 SPAG11AQ6PDA7 123 aa6.34□□□□□ -1.39
CDC42SE1-202ENST00000439374 IGLV9-49A0A0B4J1Y8 123 aa6.34□□□□□ -1.4
CDC42SE1-202ENST00000439374 BCE1O60756 84 aa6.33□□□□□ -1.4
CDC42SE1-202ENST00000439374 PHF5AQ7RTV0 110 aaKnown RBP6.33□□□□□ -1.4
CDC42SE1-202ENST00000439374 B9D2Q9BPU9 175 aa6.33□□□□□ -1.4
CDC42SE1-202ENST00000439374 ANK2Q01484 3957 aa6.32□□□□□ -1.4
CDC42SE1-202ENST00000439374 REG3GQ6UW15 175 aa6.32□□□□□ -1.4
CDC42SE1-202ENST00000439374 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
CDC42SE1-202ENST00000439374 RETNLBQ9BQ08 111 aa6.31□□□□□ -1.4
CDC42SE1-202ENST00000439374 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
CDC42SE1-202ENST00000439374 DHRS4-AS1Q9P1J3 65 aa6.31□□□□□ -1.4
CDC42SE1-202ENST00000439374 IGFL1Q6UW32 110 aa6.31□□□□□ -1.4
CDC42SE1-202ENST00000439374 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
CDC42SE1-202ENST00000439374 H3BQ85 93 aa6.31□□□□□ -1.4
CDC42SE1-202ENST00000439374 KCNQ1DNQ9H478 68 aa6.31□□□□□ -1.4
CDC42SE1-202ENST00000439374 IGLV1-50A0A075B6I6 118 aa6.3□□□□□ -1.4
CDC42SE1-202ENST00000439374 TGP01266 2768 aa6.29□□□□□ -1.4
CDC42SE1-202ENST00000439374 MDFIQ99750 246 aa6.29□□□□□ -1.4
CDC42SE1-202ENST00000439374 F8WDY8 70 aa6.28□□□□□ -1.4
CDC42SE1-202ENST00000439374 ANAPC11Q9NYG5 84 aa6.27□□□□□ -1.41
CDC42SE1-202ENST00000439374 IGLV5-48A0A075B6I7 105 aa6.26□□□□□ -1.41
CDC42SE1-202ENST00000439374 IGHV6-1A0A0B4J1U7 121 aa6.26□□□□□ -1.41
CDC42SE1-202ENST00000439374 KRTAP7-1Q8IUC3 87 aa6.26□□□□□ -1.41
CDC42SE1-202ENST00000439374 Q5VV11 94 aa6.23□□□□□ -1.41
CDC42SE1-202ENST00000439374 C16orf90A8MZG2 172 aa6.22□□□□□ -1.41
CDC42SE1-202ENST00000439374 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
CDC42SE1-202ENST00000439374 COA5Q86WW8 74 aa6.22□□□□□ -1.41
CDC42SE1-202ENST00000439374 NDUFB1O75438 58 aa6.2□□□□□ -1.42
CDC42SE1-202ENST00000439374 FLG2Q5D862 2391 aaPredicted RBP6.2□□□□□ -1.42
CDC42SE1-202ENST00000439374 Q1T7F1 81 aa6.2□□□□□ -1.42
CDC42SE1-202ENST00000439374 PRR15Q8IV56 129 aa6.2□□□□□ -1.42
CDC42SE1-202ENST00000439374 KRTAP11-1Q8IUC1 163 aa6.19□□□□□ -1.42
CDC42SE1-202ENST00000439374 CDK2AP2O75956 126 aa6.19□□□□□ -1.42
CDC42SE1-202ENST00000439374 TLX1NBP0CAT3 122 aa6.19□□□□□ -1.42
CDC42SE1-202ENST00000439374 PANO1I0J062 215 aa6.18□□□□□ -1.42
CDC42SE1-202ENST00000439374 Q8N9P0 234 aaPredicted RBP6.18□□□□□ -1.42
CDC42SE1-202ENST00000439374 PRAC1Q96KF2 57 aa6.18□□□□□ -1.42
CDC42SE1-202ENST00000439374 PRR26Q8N8Z3 221 aa6.18□□□□□ -1.42
CDC42SE1-202ENST00000439374 LY6G6CO95867 125 aa6.17□□□□□ -1.42
CDC42SE1-202ENST00000439374 IGLV8-61A0A075B6I0 122 aa6.17□□□□□ -1.42
CDC42SE1-202ENST00000439374 CNBPP62633 177 aaKnown RBP6.17□□□□□ -1.42
CDC42SE1-202ENST00000439374 LCA10Q71F78 164 aa6.16□□□□□ -1.42
CDC42SE1-202ENST00000439374 NBDYA0A0U1RRE5 68 aa6.16□□□□□ -1.42
CDC42SE1-202ENST00000439374 C14orf177Q52M58 125 aa6.16□□□□□ -1.42
CDC42SE1-202ENST00000439374 ZCCHC13Q8WW36 166 aaKnown RBP6.16□□□□□ -1.42
CDC42SE1-202ENST00000439374 APLNQ9ULZ1 77 aa6.16□□□□□ -1.42
CDC42SE1-202ENST00000439374 TNP2Q05952 138 aa6.16□□□□□ -1.42
CDC42SE1-202ENST00000439374 RBM12B-AS1Q9P1G2 102 aa6.16□□□□□ -1.42
CDC42SE1-202ENST00000439374 SPRR4Q96PI1 79 aa6.15□□□□□ -1.42
CDC42SE1-202ENST00000439374 KRTAP4-16G5E9R7 235 aaPredicted RBP6.15□□□□□ -1.43
CDC42SE1-202ENST00000439374 DNAH10Q8IVF4 4471 aa6.14□□□□□ -1.43
CDC42SE1-202ENST00000439374 SPINK7P58062 85 aa6.14□□□□□ -1.43
CDC42SE1-202ENST00000439374 SPRR1AP35321 89 aa6.13□□□□□ -1.43
CDC42SE1-202ENST00000439374 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.13□□□□□ -1.43
CDC42SE1-202ENST00000439374 PLA2G2DQ9UNK4 145 aa6.13□□□□□ -1.43
CDC42SE1-202ENST00000439374 LYSTQ99698 3801 aa6.12□□□□□ -1.43
CDC42SE1-202ENST00000439374 CD164Q04900 197 aa6.11□□□□□ -1.43
CDC42SE1-202ENST00000439374 LIMD2Q9BT23 127 aa6.11□□□□□ -1.43
CDC42SE1-202ENST00000439374 MOBPQ13875 183 aa6.11□□□□□ -1.43
CDC42SE1-202ENST00000439374 C9orf163Q8N9P6 203 aa6.11□□□□□ -1.43
CDC42SE1-202ENST00000439374 HUWE1Q7Z6Z7 4374 aaKnown RBP6.1□□□□□ -1.43
CDC42SE1-202ENST00000439374 A8MWP4 228 aa6.1□□□□□ -1.43
CDC42SE1-202ENST00000439374 IGLV5-37A0A075B6J1 123 aa6.1□□□□□ -1.43
CDC42SE1-202ENST00000439374 NUPR2A6NF83 97 aa6.09□□□□□ -1.43
CDC42SE1-202ENST00000439374 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.43
CDC42SE1-202ENST00000439374 CMYA5Q8N3K9 4069 aa6.09□□□□□ -1.43
CDC42SE1-202ENST00000439374 A0A087X002 238 aa6.09□□□□□ -1.43
CDC42SE1-202ENST00000439374 SPINK1P00995 79 aa6.09□□□□□ -1.43
CDC42SE1-202ENST00000439374 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
CDC42SE1-202ENST00000439374 CYP4F30PQ9H0H9 118 aa6.09□□□□□ -1.43
CDC42SE1-202ENST00000439374 FBN3Q75N90 2809 aa6.09□□□□□ -1.43
CDC42SE1-202ENST00000439374 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
CDC42SE1-202ENST00000439374 CIRBP-AS1Q8TBR5 109 aa6.08□□□□□ -1.44
CDC42SE1-202ENST00000439374 IGLV5-52A0A0A0MRZ9 124 aa6.07□□□□□ -1.44
CDC42SE1-202ENST00000439374 LOC101927531A0A1B0GV80 90 aa6.07□□□□□ -1.44
CDC42SE1-202ENST00000439374 RTL8CO15255 209 aa6.07□□□□□ -1.44
CDC42SE1-202ENST00000439374 DNHD1Q96M86 4753 aa6.06□□□□□ -1.44
CDC42SE1-202ENST00000439374 MEGF8Q7Z7M0 2845 aa6.05□□□□□ -1.44
CDC42SE1-202ENST00000439374 MMP24-AS1A0A0U1RRL7 71 aa6.05□□□□□ -1.44
CDC42SE1-202ENST00000439374 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
CDC42SE1-202ENST00000439374 A0A087WTM6 91 aa6.04□□□□□ -1.44
CDC42SE1-202ENST00000439374 LCE6AA0A183 80 aa6.04□□□□□ -1.44
CDC42SE1-202ENST00000439374 PSORS1C2Q9UIG4 136 aa6.04□□□□□ -1.44
CDC42SE1-202ENST00000439374 HRES1P13985 223 aa6.02□□□□□ -1.44
CDC42SE1-202ENST00000439374 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
CDC42SE1-202ENST00000439374 C1orf134Q5TEV5 83 aa6.02□□□□□ -1.45
CDC42SE1-202ENST00000439374 C8orf17Q9NRJ1 99 aa6.01□□□□□ -1.45
CDC42SE1-202ENST00000439374 ATP11AUNQ6ZP68 121 aa6.01□□□□□ -1.45
CDC42SE1-202ENST00000439374 IGKV2D-30A0A075B6S6 120 aa5.99□□□□□ -1.45
CDC42SE1-202ENST00000439374 IGKV2-30P06310 120 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms