RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 FP248Q71RG6 208 aaPredicted RBP10.35□□□□□ -0.75
CLCNKA-203ENST00000439316 HIGD2AQ9BW72 106 aa10.35□□□□□ -0.75
CLCNKA-203ENST00000439316 FAM30AQ9NZY2 134 aa10.35□□□□□ -0.75
CLCNKA-203ENST00000439316 A0A096LNI7 61 aa10.34□□□□□ -0.75
CLCNKA-203ENST00000439316 UBE2DNLQ8IWF7 75 aa10.34□□□□□ -0.75
CLCNKA-203ENST00000439316 C16orf90A8MZG2 172 aa10.33□□□□□ -0.76
CLCNKA-203ENST00000439316 K7EQZ3 153 aa10.33□□□□□ -0.76
CLCNKA-203ENST00000439316 CNBPP62633 177 aaKnown RBP10.32□□□□□ -0.76
CLCNKA-203ENST00000439316 IGFL1Q6UW32 110 aa10.32□□□□□ -0.76
CLCNKA-203ENST00000439316 KRTAP1-5Q9BYS1 174 aa10.32□□□□□ -0.76
CLCNKA-203ENST00000439316 IGLV8-61A0A075B6I0 122 aa10.3□□□□□ -0.76
CLCNKA-203ENST00000439316 A0A1W2PNN7 141 aa10.3□□□□□ -0.76
CLCNKA-203ENST00000439316 PRLHP81277 87 aa10.3□□□□□ -0.76
CLCNKA-203ENST00000439316 IGKV2-24A0A0C4DH68 120 aa10.28□□□□□ -0.76
CLCNKA-203ENST00000439316 DNAH10Q8IVF4 4471 aa10.28□□□□□ -0.76
CLCNKA-203ENST00000439316 A0A0G2JQZ4 141 aa10.28□□□□□ -0.76
CLCNKA-203ENST00000439316 LINC00474Q9P2X8 69 aa10.28□□□□□ -0.76
CLCNKA-203ENST00000439316 PSCAO43653 123 aa10.27□□□□□ -0.77
CLCNKA-203ENST00000439316 VPS13DQ5THJ4 4388 aa10.27□□□□□ -0.77
CLCNKA-203ENST00000439316 HCG22E2RYF7 251 aa10.26□□□□□ -0.77
CLCNKA-203ENST00000439316 ZCCHC13Q8WW36 166 aaKnown RBP10.26□□□□□ -0.77
CLCNKA-203ENST00000439316 FAM229BQ4G0N7 80 aa10.24□□□□□ -0.77
CLCNKA-203ENST00000439316 A0A087WSZ3 146 aa10.22□□□□□ -0.77
CLCNKA-203ENST00000439316 UBE2AP49459 152 aa10.21□□□□□ -0.78
CLCNKA-203ENST00000439316 SPRR1BP22528 89 aa10.2□□□□□ -0.78
CLCNKA-203ENST00000439316 C14orf177Q52M58 125 aa10.2□□□□□ -0.78
CLCNKA-203ENST00000439316 LINC00336Q6ZUF6 198 aa10.2□□□□□ -0.78
CLCNKA-203ENST00000439316 KRTAP11-1Q8IUC1 163 aa10.2□□□□□ -0.78
CLCNKA-203ENST00000439316 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.19□□□□□ -0.78
CLCNKA-203ENST00000439316 H0Y9J4 135 aa10.19□□□□□ -0.78
CLCNKA-203ENST00000439316 DEFB116Q30KQ4 102 aa10.19□□□□□ -0.78
CLCNKA-203ENST00000439316 PHF5AQ7RTV0 110 aaKnown RBP10.19□□□□□ -0.78
CLCNKA-203ENST00000439316 KMT2AQ03164 3969 aa10.18□□□□□ -0.78
CLCNKA-203ENST00000439316 NBDYA0A0U1RRE5 68 aa10.18□□□□□ -0.78
CLCNKA-203ENST00000439316 CHTF8P0CG12 524 aa10.18□□□□□ -0.78
CLCNKA-203ENST00000439316 WWC2-AS2Q96NR7 200 aa10.17□□□□□ -0.78
CLCNKA-203ENST00000439316 hDV103S1A0JD37 113 aa10.15□□□□□ -0.78
CLCNKA-203ENST00000439316 WFDC13Q8IUB5 93 aa10.15□□□□□ -0.78
CLCNKA-203ENST00000439316 KRTAP29-1A8MX34 341 aaPredicted RBP10.14□□□□□ -0.79
CLCNKA-203ENST00000439316 PRO0628Q9UI54 55 aa10.14□□□□□ -0.79
CLCNKA-203ENST00000439316 RPL37AP61513 92 aaKnown RBP10.13□□□□□ -0.79
CLCNKA-203ENST00000439316 C9orf163Q8N9P6 203 aa10.12□□□□□ -0.79
CLCNKA-203ENST00000439316 MPLKIPQ8TAP9 179 aa10.12□□□□□ -0.79
CLCNKA-203ENST00000439316 CYP4F30PQ9H0H9 118 aa10.1□□□□□ -0.79
CLCNKA-203ENST00000439316 PKIGQ9Y2B9 76 aa10.1□□□□□ -0.79
CLCNKA-203ENST00000439316 LRCOL1A6NCL2 159 aa10.1□□□□□ -0.79
CLCNKA-203ENST00000439316 C1orf64Q8NEQ6 169 aa10.1□□□□□ -0.79
CLCNKA-203ENST00000439316 LINC00472Q9H8W2 130 aa10.1□□□□□ -0.79
CLCNKA-203ENST00000439316 PRR15Q8IV56 129 aa10.09□□□□□ -0.79
CLCNKA-203ENST00000439316 DNAH2Q9P225 4427 aa10.08□□□□□ -0.8
CLCNKA-203ENST00000439316 A8MWP4 228 aa10.08□□□□□ -0.8
CLCNKA-203ENST00000439316 NDUFB1O75438 58 aa10.08□□□□□ -0.8
CLCNKA-203ENST00000439316 MP68P56378 58 aa10.08□□□□□ -0.8
CLCNKA-203ENST00000439316 Q6ZRN7 208 aaPredicted RBP10.07□□□□□ -0.8
CLCNKA-203ENST00000439316 KRTAP13-1Q8IUC0 172 aa10.07□□□□□ -0.8
CLCNKA-203ENST00000439316 LY6G6CO95867 125 aa10.06□□□□□ -0.8
CLCNKA-203ENST00000439316 CASC2Q6XLA1 102 aa10.06□□□□□ -0.8
CLCNKA-203ENST00000439316 TRAV22A0A0B4J277 110 aa10.06□□□□□ -0.8
CLCNKA-203ENST00000439316 PANO1I0J062 215 aa10.04□□□□□ -0.8
CLCNKA-203ENST00000439316 Q6ZR54 194 aa10.04□□□□□ -0.8
CLCNKA-203ENST00000439316 H3BPC8 53 aa10.02□□□□□ -0.81
CLCNKA-203ENST00000439316 LINC00208Q96KT6 92 aa10.02□□□□□ -0.81
CLCNKA-203ENST00000439316 DNAH6Q9C0G6 4158 aa10.02□□□□□ -0.81
CLCNKA-203ENST00000439316 ALMS1Q8TCU4 4167 aa10.01□□□□□ -0.81
CLCNKA-203ENST00000439316 H0Y9P7 68 aa10.01□□□□□ -0.81
CLCNKA-203ENST00000439316 PRR4Q16378 134 aa10.01□□□□□ -0.81
CLCNKA-203ENST00000439316 Q1T7F1 81 aa10.01□□□□□ -0.81
CLCNKA-203ENST00000439316 BRK1Q8WUW1 75 aa9.99□□□□□ -0.81
CLCNKA-203ENST00000439316 MMP24-AS1A0A0U1RRL7 71 aa9.98□□□□□ -0.81
CLCNKA-203ENST00000439316 SRRM2Q9UQ35 2752 aaKnown RBP9.97□□□□□ -0.81
CLCNKA-203ENST00000439316 SPANXA2-OT1Q8N9U9 137 aa9.97□□□□□ -0.81
CLCNKA-203ENST00000439316 SPACA4Q8TDM5 124 aa9.97□□□□□ -0.81
CLCNKA-203ENST00000439316 HECTD4Q9Y4D8 3996 aa9.96□□□□□ -0.82
CLCNKA-203ENST00000439316 C1orf134Q5TEV5 83 aa9.95□□□□□ -0.82
CLCNKA-203ENST00000439316 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.95□□□□□ -0.82
CLCNKA-203ENST00000439316 A0A087WTM6 91 aa9.94□□□□□ -0.82
CLCNKA-203ENST00000439316 DNAH17Q9UFH2 4485 aa9.94□□□□□ -0.82
CLCNKA-203ENST00000439316 HYDINQ4G0P3 5121 aa9.94□□□□□ -0.82
CLCNKA-203ENST00000439316 LINC00483Q53H64 154 aa9.94□□□□□ -0.82
CLCNKA-203ENST00000439316 Q96NJ1 140 aa9.94□□□□□ -0.82
CLCNKA-203ENST00000439316 FRAS1Q86XX4 4008 aa9.92□□□□□ -0.82
CLCNKA-203ENST00000439316 IGLV9-49A0A0B4J1Y8 123 aa9.91□□□□□ -0.82
CLCNKA-203ENST00000439316 ASB16-AS1Q495Z4 193 aa9.9□□□□□ -0.82
CLCNKA-203ENST00000439316 SACSQ9NZJ4 4579 aa9.88□□□□□ -0.83
CLCNKA-203ENST00000439316 MOBPQ13875 183 aa9.88□□□□□ -0.83
CLCNKA-203ENST00000439316 ZNF706Q9Y5V0 76 aaPredicted RBP9.86□□□□□ -0.83
CLCNKA-203ENST00000439316 V9GYY9 64 aa9.84□□□□□ -0.83
CLCNKA-203ENST00000439316 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
CLCNKA-203ENST00000439316 PSPHP1O15172 72 aa9.83□□□□□ -0.84
CLCNKA-203ENST00000439316 TP53AIP1Q9HCN2 124 aa9.83□□□□□ -0.84
CLCNKA-203ENST00000439316 IGLV5-52A0A0A0MRZ9 124 aa9.83□□□□□ -0.84
CLCNKA-203ENST00000439316 RTL8CO15255 209 aa9.83□□□□□ -0.84
CLCNKA-203ENST00000439316 PSORS1C2Q9UIG4 136 aa9.82□□□□□ -0.84
CLCNKA-203ENST00000439316 DNAH11Q96DT5 4516 aa9.82□□□□□ -0.84
CLCNKA-203ENST00000439316 FAT2Q9NYQ8 4349 aa9.82□□□□□ -0.84
CLCNKA-203ENST00000439316 IGLV7-46A0A075B6I9 117 aa9.8□□□□□ -0.84
CLCNKA-203ENST00000439316 A0A1B0GVX0 72 aa9.8□□□□□ -0.84
CLCNKA-203ENST00000439316 PLAC8Q9NZF1 115 aa9.79□□□□□ -0.84
CLCNKA-203ENST00000439316 DNAH5Q8TE73 4624 aa9.78□□□□□ -0.84
CLCNKA-203ENST00000439316 A8MUN3 132 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms