RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 MDFIQ99750 246 aa6.5□□□□□ -1.37
CD44-210ENST00000434472 NBEAL1Q6ZS30 2694 aa6.5□□□□□ -1.37
CD44-210ENST00000434472 K7EQZ3 153 aa6.49□□□□□ -1.37
CD44-210ENST00000434472 OXTP01178 125 aa6.49□□□□□ -1.37
CD44-210ENST00000434472 Q6ZRN7 208 aaPredicted RBP6.49□□□□□ -1.37
CD44-210ENST00000434472 LCE6AA0A183 80 aa6.48□□□□□ -1.37
CD44-210ENST00000434472 HCG22E2RYF7 251 aa6.48□□□□□ -1.37
CD44-210ENST00000434472 DNAH9Q9NYC9 4486 aa6.48□□□□□ -1.37
CD44-210ENST00000434472 A0A087WSZ3 146 aa6.47□□□□□ -1.37
CD44-210ENST00000434472 KRTAP11-1Q8IUC1 163 aa6.47□□□□□ -1.37
CD44-210ENST00000434472 FAM30AQ9NZY2 134 aa6.47□□□□□ -1.37
CD44-210ENST00000434472 C5orf47Q569G3 176 aa6.45□□□□□ -1.38
CD44-210ENST00000434472 MGAM2Q2M2H8 2515 aa6.44□□□□□ -1.38
CD44-210ENST00000434472 A0A0G2JQZ4 141 aa6.44□□□□□ -1.38
CD44-210ENST00000434472 KRTAP13-1Q8IUC0 172 aa6.44□□□□□ -1.38
CD44-210ENST00000434472 SPACA4Q8TDM5 124 aa6.44□□□□□ -1.38
CD44-210ENST00000434472 SMIM26A0A096LP01 95 aa6.43□□□□□ -1.38
CD44-210ENST00000434472 A0A087WTM6 91 aa6.43□□□□□ -1.38
CD44-210ENST00000434472 RPL37AP61513 92 aaKnown RBP6.42□□□□□ -1.38
CD44-210ENST00000434472 ZNF706Q9Y5V0 76 aaPredicted RBP6.42□□□□□ -1.38
CD44-210ENST00000434472 Q5XG85 94 aa6.41□□□□□ -1.38
CD44-210ENST00000434472 STAB2Q8WWQ8 2551 aa6.41□□□□□ -1.38
CD44-210ENST00000434472 FBN3Q75N90 2809 aa6.41□□□□□ -1.38
CD44-210ENST00000434472 PANO1I0J062 215 aa6.4□□□□□ -1.38
CD44-210ENST00000434472 ZCCHC13Q8WW36 166 aaKnown RBP6.4□□□□□ -1.38
CD44-210ENST00000434472 A8MWP4 228 aa6.39□□□□□ -1.39
CD44-210ENST00000434472 DEFB116Q30KQ4 102 aa6.39□□□□□ -1.39
CD44-210ENST00000434472 PRR15Q8IV56 129 aa6.39□□□□□ -1.39
CD44-210ENST00000434472 LINC00472Q9H8W2 130 aa6.39□□□□□ -1.39
CD44-210ENST00000434472 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.39□□□□□ -1.39
CD44-210ENST00000434472 DNHD1Q96M86 4753 aa6.39□□□□□ -1.39
CD44-210ENST00000434472 WFDC13Q8IUB5 93 aa6.39□□□□□ -1.39
CD44-210ENST00000434472 KRTAP29-1A8MX34 341 aaPredicted RBP6.38□□□□□ -1.39
CD44-210ENST00000434472 RTL8CO15255 209 aa6.38□□□□□ -1.39
CD44-210ENST00000434472 MP68P56378 58 aa6.38□□□□□ -1.39
CD44-210ENST00000434472 LINC00483Q53H64 154 aa6.38□□□□□ -1.39
CD44-210ENST00000434472 CASC2Q6XLA1 102 aa6.38□□□□□ -1.39
CD44-210ENST00000434472 H3BPC8 53 aa6.37□□□□□ -1.39
CD44-210ENST00000434472 Q6ZR54 194 aa6.37□□□□□ -1.39
CD44-210ENST00000434472 DNAH10Q8IVF4 4471 aa6.37□□□□□ -1.39
CD44-210ENST00000434472 NDUFB1O75438 58 aa6.36□□□□□ -1.39
CD44-210ENST00000434472 C4orf26Q17RF5 130 aa6.36□□□□□ -1.39
CD44-210ENST00000434472 VPS13DQ5THJ4 4388 aa6.36□□□□□ -1.39
CD44-210ENST00000434472 PLAC8Q9NZF1 115 aa6.36□□□□□ -1.39
CD44-210ENST00000434472 IGLV5-52A0A0A0MRZ9 124 aa6.35□□□□□ -1.39
CD44-210ENST00000434472 COL7A1Q02388 2944 aa6.34□□□□□ -1.39
CD44-210ENST00000434472 IGLV9-49A0A0B4J1Y8 123 aa6.33□□□□□ -1.4
CD44-210ENST00000434472 HRCT1Q6UXD1 115 aa6.33□□□□□ -1.4
CD44-210ENST00000434472 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
CD44-210ENST00000434472 C1orf134Q5TEV5 83 aa6.32□□□□□ -1.4
CD44-210ENST00000434472 PSORS1C2Q9UIG4 136 aa6.32□□□□□ -1.4
CD44-210ENST00000434472 PLECQ15149 4684 aaKnown RBP6.32□□□□□ -1.4
CD44-210ENST00000434472 ZNF861PO60384 105 aa6.32□□□□□ -1.4
CD44-210ENST00000434472 FP248Q71RG6 208 aaPredicted RBP6.32□□□□□ -1.4
CD44-210ENST00000434472 CYP4F30PQ9H0H9 118 aa6.32□□□□□ -1.4
CD44-210ENST00000434472 TRAV22A0A0B4J277 110 aa6.3□□□□□ -1.4
CD44-210ENST00000434472 MMP24-AS1A0A0U1RRL7 71 aa6.3□□□□□ -1.4
CD44-210ENST00000434472 H0Y9P7 68 aa6.3□□□□□ -1.4
CD44-210ENST00000434472 MOBPQ13875 183 aa6.29□□□□□ -1.4
CD44-210ENST00000434472 WWC2-AS2Q96NR7 200 aa6.29□□□□□ -1.4
CD44-210ENST00000434472 LINC00208Q96KT6 92 aa6.28□□□□□ -1.4
CD44-210ENST00000434472 Q96NJ1 140 aa6.28□□□□□ -1.4
CD44-210ENST00000434472 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
CD44-210ENST00000434472 CDK2AP2O75956 126 aa6.27□□□□□ -1.41
CD44-210ENST00000434472 SPANXA2-OT1Q8N9U9 137 aa6.27□□□□□ -1.41
CD44-210ENST00000434472 DNAH7Q8WXX0 4024 aa6.26□□□□□ -1.41
CD44-210ENST00000434472 DNAH17Q9UFH2 4485 aa6.26□□□□□ -1.41
CD44-210ENST00000434472 IGLV7-43P04211 117 aa6.25□□□□□ -1.41
CD44-210ENST00000434472 ASB16-AS1Q495Z4 193 aa6.25□□□□□ -1.41
CD44-210ENST00000434472 FAM229BQ4G0N7 80 aa6.25□□□□□ -1.41
CD44-210ENST00000434472 C1orf64Q8NEQ6 169 aa6.25□□□□□ -1.41
CD44-210ENST00000434472 C8orf17Q9NRJ1 99 aa6.25□□□□□ -1.41
CD44-210ENST00000434472 A0A1B0GVX0 72 aa6.25□□□□□ -1.41
CD44-210ENST00000434472 LY6G6CO95867 125 aa6.23□□□□□ -1.41
CD44-210ENST00000434472 LYSTQ99698 3801 aa6.23□□□□□ -1.41
CD44-210ENST00000434472 CD164Q04900 197 aa6.22□□□□□ -1.41
CD44-210ENST00000434472 CSMD3Q7Z407 3707 aa6.21□□□□□ -1.41
CD44-210ENST00000434472 SSBP3-AS1Q7Z2R9 100 aa6.21□□□□□ -1.41
CD44-210ENST00000434472 MPLKIPQ8TAP9 179 aa6.21□□□□□ -1.41
CD44-210ENST00000434472 PRKDCP78527 4128 aaKnown RBP6.21□□□□□ -1.42
CD44-210ENST00000434472 TENM2Q9NT68 2774 aa6.21□□□□□ -1.42
CD44-210ENST00000434472 STARD9Q9P2P6 4700 aa6.2□□□□□ -1.42
CD44-210ENST00000434472 IGHV6-1A0A0B4J1U7 121 aa6.2□□□□□ -1.42
CD44-210ENST00000434472 Q1T7F1 81 aa6.2□□□□□ -1.42
CD44-210ENST00000434472 MRPL34Q9BQ48 92 aaKnown RBP6.2□□□□□ -1.42
CD44-210ENST00000434472 ANAPC11Q9NYG5 84 aa6.2□□□□□ -1.42
CD44-210ENST00000434472 DNAH6Q9C0G6 4158 aa6.2□□□□□ -1.42
CD44-210ENST00000434472 PRR4Q16378 134 aa6.18□□□□□ -1.42
CD44-210ENST00000434472 PRO0628Q9UI54 55 aa6.18□□□□□ -1.42
CD44-210ENST00000434472 V9GYY9 64 aa6.18□□□□□ -1.42
CD44-210ENST00000434472 LINC00336Q6ZUF6 198 aa6.17□□□□□ -1.42
CD44-210ENST00000434472 DNAH2Q9P225 4427 aa6.17□□□□□ -1.42
CD44-210ENST00000434472 SRRM2Q9UQ35 2752 aaKnown RBP6.16□□□□□ -1.42
CD44-210ENST00000434472 IGLV7-46A0A075B6I9 117 aa6.16□□□□□ -1.42
CD44-210ENST00000434472 NDUFS5O43920 106 aa6.16□□□□□ -1.42
CD44-210ENST00000434472 C8orf87E5RJ46 101 aa6.15□□□□□ -1.42
CD44-210ENST00000434472 CIRBP-AS1Q8TBR5 109 aa6.15□□□□□ -1.42
CD44-210ENST00000434472 HECTD4Q9Y4D8 3996 aa6.15□□□□□ -1.42
CD44-210ENST00000434472 KRTAP10-2P60368 255 aa6.13□□□□□ -1.43
CD44-210ENST00000434472 C1orf195Q5TG92 126 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms