RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FGF7P21781 194 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 FAUP35544 74 aaKnown RBP0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 UBE2L3P68036 154 aaKnown RBP0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 ATP11AUNQ6ZP68 121 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 C5orf17Q8NAS9 161 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 FAM167A-AS1Q96KT0 104 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 AP1S3Q96PC3 154 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 NPCDR1Q9BY65 106 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 BIN3Q9NQY0 253 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 TMEM242Q9NWH2 141 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 MUC12Q9UKN1 5478 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 FXYD6-FXYD2A0A087WZ82 144 aa0.84□□□□□ -2.27
HMGB1P27-201ENST00000431429 ZNF727A8MUV8 499 aa0.84□□□□□ -2.27
HMGB1P27-201ENST00000431429 F2Z2F3 143 aa0.84□□□□□ -2.27
HMGB1P27-201ENST00000431429 GNGT1P63211 74 aa0.84□□□□□ -2.27
HMGB1P27-201ENST00000431429 SPAG11BQ08648 103 aa0.84□□□□□ -2.27
HMGB1P27-201ENST00000431429 SMIM15Q7Z3B0 74 aa0.84□□□□□ -2.27
HMGB1P27-201ENST00000431429 LIMD2Q9BT23 127 aa0.84□□□□□ -2.27
HMGB1P27-201ENST00000431429 CDC42SE2Q9NRR3 84 aa0.84□□□□□ -2.27
HMGB1P27-201ENST00000431429 MDN1Q9NU22 5596 aa0.84□□□□□ -2.28
HMGB1P27-201ENST00000431429 TRAV13-1A0A0B4J241 112 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 UBE2L5PA0A1B0GUS4 154 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 A0A1B0GV72 72 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 A6NN06 94 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 I3L3M4 83 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 CST7O76096 145 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 SFT2D2O95562 160 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 MT2AP02795 61 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 MGPP08493 103 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 CXCL1P09341 107 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 CKS1BP61024 79 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 RPL37P61927 97 aaKnown RBP0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 UBE2G1P62253 170 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 S100A12P80511 92 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 C5orf38Q86SI9 138 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 OBSCN-AS1Q96MR7 158 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 TMEM167BQ9NRX6 74 aa0.83□□□□□ -2.28
HMGB1P27-201ENST00000431429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.82□□□□□ -2.28
HMGB1P27-201ENST00000431429 A0A1W2PRE2 83 aa0.82□□□□□ -2.28
HMGB1P27-201ENST00000431429 C9orf92A6NGG3 77 aa0.82□□□□□ -2.28
HMGB1P27-201ENST00000431429 PPP1R17O96001 155 aa0.82□□□□□ -2.28
HMGB1P27-201ENST00000431429 FCER1GP30273 86 aa0.82□□□□□ -2.28
HMGB1P27-201ENST00000431429 OR10AG1Q8NH19 301 aa0.82□□□□□ -2.28
HMGB1P27-201ENST00000431429 TMEM254Q8TBM7 123 aa0.82□□□□□ -2.28
HMGB1P27-201ENST00000431429 SMIM4Q8WVI0 70 aa0.82□□□□□ -2.28
HMGB1P27-201ENST00000431429 SPRR4Q96PI1 79 aa0.82□□□□□ -2.28
HMGB1P27-201ENST00000431429 TCEAL7Q9BRU2 100 aa0.82□□□□□ -2.28
HMGB1P27-201ENST00000431429 C6orf48Q9UBA6 75 aa0.82□□□□□ -2.28
HMGB1P27-201ENST00000431429 FLGP20930 4061 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 C9orf170A2RU37 121 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 C7orf77A4D0Y5 90 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 F8VRH5 84 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 MT1FP04733 61 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 SPRR2EP22531 72 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 SPRR2BP35325 72 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 SPRR2AP35326 72 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 CRIP1P50238 77 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 PRLHP81277 87 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 AKAP14Q86UN6 197 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 PRR15Q8IV56 129 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 TOMM5Q8N4H5 51 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 Q9H521 79 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 ST20Q9HBF5 79 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 CDC42SE1Q9NRR8 79 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 LAMTOR3Q9UHA4 124 aa0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 DSTQ03001 7570 aaKnown RBP0.81□□□□□ -2.28
HMGB1P27-201ENST00000431429 GPR98Q8WXG9 6306 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 NAP1L6A6NFF2 107 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 CCDC160A6NGH7 325 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 NDUFB6O95139 128 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 GCHFRP30047 84 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 FOXA3P55318 350 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 SEC11AP67812 179 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 HBBP68871 147 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 SERF2P84101 59 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 Q86TA4 180 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 BAGE2Q86Y30 109 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 Q8IZM0 81 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 C9orf62Q8N4C0 152 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 MAP1LC3BQ9GZQ8 125 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 SPANXA1Q9NS26 97 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 TOMM7Q9P0U1 55 aa0.8□□□□□ -2.28
HMGB1P27-201ENST00000431429 BORCS7-ASMTA0A0B4J1R7 106 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 TRBV27A0A0K0K1C4 114 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 ETDCA0A1B0GVM5 59 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 TSTD3H0UI37 97 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 SIX6O95475 246 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 SPRR2DP22532 72 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 LSM3P62310 102 aaKnown RBP0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 MRPS36P82909 103 aaKnown RBP0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 COX17Q14061 63 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 C9orf153Q5TBE3 101 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 C2orf82Q6UX34 121 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 CHCHD1Q96BP2 118 aaKnown RBP0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 SPRR2FQ96RM1 72 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 C2orf88Q9BSF0 95 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 TNFSF18Q9UNG2 199 aa0.79□□□□□ -2.28
HMGB1P27-201ENST00000431429 A0A087WXM4 84 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 LOC107984156A0A0G2JMH3 177 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 MAP1LC3B2A6NCE7 125 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms