RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 Q6ZQT0 140 aa10.46□□□□□ -0.74
USHBP1-203ENST00000431146 Q8N377 158 aa10.46□□□□□ -0.74
USHBP1-203ENST00000431146 GHRHP01286 108 aa10.45□□□□□ -0.74
USHBP1-203ENST00000431146 LINC01547P58512 204 aaPredicted RBP10.45□□□□□ -0.74
USHBP1-203ENST00000431146 LINC00474Q9P2X8 69 aa10.45□□□□□ -0.74
USHBP1-203ENST00000431146 SRRM2Q9UQ35 2752 aaKnown RBP10.45□□□□□ -0.74
USHBP1-203ENST00000431146 FP248Q71RG6 208 aaPredicted RBP10.45□□□□□ -0.74
USHBP1-203ENST00000431146 TNP2Q05952 138 aa10.43□□□□□ -0.74
USHBP1-203ENST00000431146 SPACA4Q8TDM5 124 aa10.43□□□□□ -0.74
USHBP1-203ENST00000431146 BRK1Q8WUW1 75 aa10.43□□□□□ -0.74
USHBP1-203ENST00000431146 LOC110117498A0A087WWA1 95 aa10.43□□□□□ -0.74
USHBP1-203ENST00000431146 IGLV5-52A0A0A0MRZ9 124 aa10.4□□□□□ -0.74
USHBP1-203ENST00000431146 A0A0U1RQV1 116 aa10.4□□□□□ -0.74
USHBP1-203ENST00000431146 CD164Q04900 197 aa10.4□□□□□ -0.74
USHBP1-203ENST00000431146 PMAIP1Q13794 54 aa10.4□□□□□ -0.74
USHBP1-203ENST00000431146 HIGD2AQ9BW72 106 aa10.4□□□□□ -0.74
USHBP1-203ENST00000431146 TRBV7-4A0A0J9YYF1 115 aa10.4□□□□□ -0.74
USHBP1-203ENST00000431146 C3orf84H3BNL1 204 aa10.39□□□□□ -0.75
USHBP1-203ENST00000431146 DNAH8Q96JB1 4490 aa10.38□□□□□ -0.75
USHBP1-203ENST00000431146 DNAH11Q96DT5 4516 aa10.37□□□□□ -0.75
USHBP1-203ENST00000431146 IGLV5-48A0A075B6I7 105 aa10.37□□□□□ -0.75
USHBP1-203ENST00000431146 H7BZZ5 65 aa10.36□□□□□ -0.75
USHBP1-203ENST00000431146 BCE1O60756 84 aa10.36□□□□□ -0.75
USHBP1-203ENST00000431146 ATP5EP56381 51 aaPredicted RBP10.36□□□□□ -0.75
USHBP1-203ENST00000431146 DNAH5Q8TE73 4624 aa10.36□□□□□ -0.75
USHBP1-203ENST00000431146 IGKV3D-7A0A0C4DH55 119 aa10.36□□□□□ -0.75
USHBP1-203ENST00000431146 PDE6GP18545 87 aa10.34□□□□□ -0.75
USHBP1-203ENST00000431146 FAT2Q9NYQ8 4349 aa10.34□□□□□ -0.75
USHBP1-203ENST00000431146 PRR15Q8IV56 129 aa10.34□□□□□ -0.75
USHBP1-203ENST00000431146 UBE2AP49459 152 aa10.33□□□□□ -0.76
USHBP1-203ENST00000431146 KRTAP10-2P60368 255 aa10.33□□□□□ -0.76
USHBP1-203ENST00000431146 PKD1P98161 4303 aa10.32□□□□□ -0.76
USHBP1-203ENST00000431146 KLKP1Q107X0 134 aa10.31□□□□□ -0.76
USHBP1-203ENST00000431146 ATP5EP2Q5VTU8 51 aa10.31□□□□□ -0.76
USHBP1-203ENST00000431146 UBL5Q9BZL1 73 aa10.31□□□□□ -0.76
USHBP1-203ENST00000431146 SMIM29Q86T20 159 aa10.3□□□□□ -0.76
USHBP1-203ENST00000431146 SACSQ9NZJ4 4579 aa10.29□□□□□ -0.76
USHBP1-203ENST00000431146 C20orf197Q8N268 126 aa10.29□□□□□ -0.76
USHBP1-203ENST00000431146 A0A087WVE0 104 aa10.28□□□□□ -0.76
USHBP1-203ENST00000431146 PLAC8Q9NZF1 115 aa10.28□□□□□ -0.76
USHBP1-203ENST00000431146 H0Y9J4 135 aa10.28□□□□□ -0.76
USHBP1-203ENST00000431146 C1orf137Q5JT78 98 aa10.27□□□□□ -0.77
USHBP1-203ENST00000431146 Q6ZVQ6 151 aa10.27□□□□□ -0.77
USHBP1-203ENST00000431146 A0A0G2JQZ4 141 aa10.27□□□□□ -0.77
USHBP1-203ENST00000431146 NDUFC1O43677 76 aa10.27□□□□□ -0.77
USHBP1-203ENST00000431146 KRTAP13-1Q8IUC0 172 aa10.26□□□□□ -0.77
USHBP1-203ENST00000431146 PSORS1C2Q9UIG4 136 aa10.25□□□□□ -0.77
USHBP1-203ENST00000431146 FAM30AQ9NZY2 134 aa10.25□□□□□ -0.77
USHBP1-203ENST00000431146 TRAV7A0A075B6U4 112 aa10.24□□□□□ -0.77
USHBP1-203ENST00000431146 A0A1W2PNM2 257 aa10.24□□□□□ -0.77
USHBP1-203ENST00000431146 HAMPP81172 84 aa10.24□□□□□ -0.77
USHBP1-203ENST00000431146 F8WEM9 126 aa10.23□□□□□ -0.77
USHBP1-203ENST00000431146 SCXQ7RTU7 201 aa10.2□□□□□ -0.78
USHBP1-203ENST00000431146 C4orf48Q5BLP8 95 aa10.19□□□□□ -0.78
USHBP1-203ENST00000431146 IGFL1Q6UW32 110 aa10.19□□□□□ -0.78
USHBP1-203ENST00000431146 KRTAP10-1P60331 282 aa10.18□□□□□ -0.78
USHBP1-203ENST00000431146 Q8NBF4 154 aa10.18□□□□□ -0.78
USHBP1-203ENST00000431146 CIRBP-AS1Q8TBR5 109 aa10.18□□□□□ -0.78
USHBP1-203ENST00000431146 SPRR1BP22528 89 aa10.16□□□□□ -0.78
USHBP1-203ENST00000431146 PKHD1P08F94 4074 aa10.16□□□□□ -0.78
USHBP1-203ENST00000431146 NREPQ16612 68 aa10.15□□□□□ -0.78
USHBP1-203ENST00000431146 IGLV8-61A0A075B6I0 122 aa10.13□□□□□ -0.79
USHBP1-203ENST00000431146 SPRR4Q96PI1 79 aa10.13□□□□□ -0.79
USHBP1-203ENST00000431146 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
USHBP1-203ENST00000431146 ZNF861PO60384 105 aa10.12□□□□□ -0.79
USHBP1-203ENST00000431146 LCE6AA0A183 80 aa10.11□□□□□ -0.79
USHBP1-203ENST00000431146 CXCL6P80162 114 aa10.11□□□□□ -0.79
USHBP1-203ENST00000431146 Q6ZSA8 131 aa10.1□□□□□ -0.79
USHBP1-203ENST00000431146 ANAPC11Q9NYG5 84 aa10.1□□□□□ -0.79
USHBP1-203ENST00000431146 Q8N9L7 120 aa10.1□□□□□ -0.79
USHBP1-203ENST00000431146 IGLV9-49A0A0B4J1Y8 123 aa10.09□□□□□ -0.79
USHBP1-203ENST00000431146 IGLV7-43P04211 117 aa10.08□□□□□ -0.8
USHBP1-203ENST00000431146 A0A1B0GW54 56 aa10.07□□□□□ -0.8
USHBP1-203ENST00000431146 KMT2CQ8NEZ4 4911 aaKnown RBP10.07□□□□□ -0.8
USHBP1-203ENST00000431146 A0A087WSZ3 146 aa10.06□□□□□ -0.8
USHBP1-203ENST00000431146 BPY2O14599 106 aa10.06□□□□□ -0.8
USHBP1-203ENST00000431146 LINC00483Q53H64 154 aa10.05□□□□□ -0.8
USHBP1-203ENST00000431146 MPLKIPQ8TAP9 179 aa10.04□□□□□ -0.8
USHBP1-203ENST00000431146 ZNF706Q9Y5V0 76 aaPredicted RBP10.04□□□□□ -0.8
USHBP1-203ENST00000431146 FAM229BQ4G0N7 80 aa10.03□□□□□ -0.8
USHBP1-203ENST00000431146 RYR2Q92736 4967 aa10.03□□□□□ -0.8
USHBP1-203ENST00000431146 VPS13BQ7Z7G8 4022 aa10.02□□□□□ -0.8
USHBP1-203ENST00000431146 DEFB116Q30KQ4 102 aa10.02□□□□□ -0.81
USHBP1-203ENST00000431146 SNURFQ9Y675 71 aa10.02□□□□□ -0.81
USHBP1-203ENST00000431146 IGKV4-1P06312 121 aa10□□□□□ -0.81
USHBP1-203ENST00000431146 MOBPQ13875 183 aa10□□□□□ -0.81
USHBP1-203ENST00000431146 Q1T7F1 81 aa10□□□□□ -0.81
USHBP1-203ENST00000431146 KTN1-AS1Q86SY8 53 aa9.98□□□□□ -0.81
USHBP1-203ENST00000431146 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
USHBP1-203ENST00000431146 DYNC1H1Q14204 4646 aaKnown RBP9.97□□□□□ -0.81
USHBP1-203ENST00000431146 DSCR10P59022 87 aa9.96□□□□□ -0.82
USHBP1-203ENST00000431146 K7EQZ3 153 aa9.94□□□□□ -0.82
USHBP1-203ENST00000431146 A0A1B0GVY2 172 aa9.93□□□□□ -0.82
USHBP1-203ENST00000431146 RPL37AP61513 92 aaKnown RBP9.91□□□□□ -0.82
USHBP1-203ENST00000431146 TMEM254Q8TBM7 123 aa9.89□□□□□ -0.83
USHBP1-203ENST00000431146 NDUFS5O43920 106 aa9.88□□□□□ -0.83
USHBP1-203ENST00000431146 LINC00472Q9H8W2 130 aa9.87□□□□□ -0.83
USHBP1-203ENST00000431146 A0A087X002 238 aa9.86□□□□□ -0.83
USHBP1-203ENST00000431146 hDV103S1A0JD37 113 aa9.86□□□□□ -0.83
USHBP1-203ENST00000431146 SMR3BP02814 79 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms