RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 DPH3Q96FX2 82 aa9.93□□□□□ -0.82
TVP23C-203ENST00000428082 PKIGQ9Y2B9 76 aa9.93□□□□□ -0.82
TVP23C-203ENST00000428082 FAT2Q9NYQ8 4349 aa9.92□□□□□ -0.82
TVP23C-203ENST00000428082 Q8NBF4 154 aa9.92□□□□□ -0.82
TVP23C-203ENST00000428082 NDUFC1O43677 76 aa9.9□□□□□ -0.82
TVP23C-203ENST00000428082 ERC2-IT1O76042 136 aa9.9□□□□□ -0.82
TVP23C-203ENST00000428082 IGKV4-1P06312 121 aa9.9□□□□□ -0.82
TVP23C-203ENST00000428082 F8WEM9 126 aa9.9□□□□□ -0.83
TVP23C-203ENST00000428082 ST20-AS1Q8NBB2 130 aa9.9□□□□□ -0.83
TVP23C-203ENST00000428082 SPRR4Q96PI1 79 aa9.9□□□□□ -0.83
TVP23C-203ENST00000428082 A0A1W2PNM2 257 aa9.88□□□□□ -0.83
TVP23C-203ENST00000428082 HECTD4Q9Y4D8 3996 aa9.87□□□□□ -0.83
TVP23C-203ENST00000428082 FAM236DA0A1B0GTK5 79 aa9.87□□□□□ -0.83
TVP23C-203ENST00000428082 FAM236CP0DP71 79 aa9.87□□□□□ -0.83
TVP23C-203ENST00000428082 A0A096LNI7 61 aa9.86□□□□□ -0.83
TVP23C-203ENST00000428082 RYR3Q15413 4870 aa9.86□□□□□ -0.83
TVP23C-203ENST00000428082 DNAH11Q96DT5 4516 aa9.86□□□□□ -0.83
TVP23C-203ENST00000428082 H7BZZ5 65 aa9.85□□□□□ -0.83
TVP23C-203ENST00000428082 C9orf163Q8N9P6 203 aa9.85□□□□□ -0.83
TVP23C-203ENST00000428082 KRTAP10-2P60368 255 aa9.84□□□□□ -0.83
TVP23C-203ENST00000428082 LINC00336Q6ZUF6 198 aa9.84□□□□□ -0.83
TVP23C-203ENST00000428082 PKD1P98161 4303 aa9.84□□□□□ -0.83
TVP23C-203ENST00000428082 Q8N9L7 120 aa9.83□□□□□ -0.84
TVP23C-203ENST00000428082 IGLV5-52A0A0A0MRZ9 124 aa9.82□□□□□ -0.84
TVP23C-203ENST00000428082 IGKV2-24A0A0C4DH68 120 aa9.82□□□□□ -0.84
TVP23C-203ENST00000428082 SMIM29Q86T20 159 aa9.82□□□□□ -0.84
TVP23C-203ENST00000428082 ATP5EP56381 51 aaPredicted RBP9.82□□□□□ -0.84
TVP23C-203ENST00000428082 IGLV8-61A0A075B6I0 122 aa9.8□□□□□ -0.84
TVP23C-203ENST00000428082 A0A1W2PNN7 141 aa9.8□□□□□ -0.84
TVP23C-203ENST00000428082 H0Y9J4 135 aa9.8□□□□□ -0.84
TVP23C-203ENST00000428082 TMEM254Q8TBM7 123 aa9.8□□□□□ -0.84
TVP23C-203ENST00000428082 OCR1Q9BZK8 76 aa9.8□□□□□ -0.84
TVP23C-203ENST00000428082 SNURFQ9Y675 71 aa9.8□□□□□ -0.84
TVP23C-203ENST00000428082 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
TVP23C-203ENST00000428082 SERP1Q9Y6X1 66 aa9.79□□□□□ -0.84
TVP23C-203ENST00000428082 DNAH5Q8TE73 4624 aa9.78□□□□□ -0.84
TVP23C-203ENST00000428082 A0A1B0GVY2 172 aa9.77□□□□□ -0.85
TVP23C-203ENST00000428082 PRLHP81277 87 aa9.76□□□□□ -0.85
TVP23C-203ENST00000428082 CHTF8P0CG12 524 aa9.76□□□□□ -0.85
TVP23C-203ENST00000428082 HIGD2AQ9BW72 106 aa9.76□□□□□ -0.85
TVP23C-203ENST00000428082 IGFL1Q6UW32 110 aa9.75□□□□□ -0.85
TVP23C-203ENST00000428082 UBE2AP49459 152 aa9.74□□□□□ -0.85
TVP23C-203ENST00000428082 PANO1I0J062 215 aa9.74□□□□□ -0.85
TVP23C-203ENST00000428082 SPRR1BP22528 89 aa9.74□□□□□ -0.85
TVP23C-203ENST00000428082 DSCR10P59022 87 aa9.73□□□□□ -0.85
TVP23C-203ENST00000428082 A0A0U1RQV1 116 aa9.72□□□□□ -0.85
TVP23C-203ENST00000428082 EPM2AB3EWF7 344 aa9.72□□□□□ -0.85
TVP23C-203ENST00000428082 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.72□□□□□ -0.85
TVP23C-203ENST00000428082 PKHD1P08F94 4074 aa9.72□□□□□ -0.85
TVP23C-203ENST00000428082 PHF5AQ7RTV0 110 aaKnown RBP9.71□□□□□ -0.86
TVP23C-203ENST00000428082 OXTP01178 125 aa9.7□□□□□ -0.86
TVP23C-203ENST00000428082 KRTAP10-1P60331 282 aa9.7□□□□□ -0.86
TVP23C-203ENST00000428082 K7EQZ3 153 aa9.68□□□□□ -0.86
TVP23C-203ENST00000428082 SPACA4Q8TDM5 124 aa9.68□□□□□ -0.86
TVP23C-203ENST00000428082 HCG22E2RYF7 251 aa9.68□□□□□ -0.86
TVP23C-203ENST00000428082 FAM30AQ9NZY2 134 aa9.67□□□□□ -0.86
TVP23C-203ENST00000428082 A0A087WSZ3 146 aa9.66□□□□□ -0.86
TVP23C-203ENST00000428082 C5orf47Q569G3 176 aa9.64□□□□□ -0.87
TVP23C-203ENST00000428082 DNAH8Q96JB1 4490 aa9.64□□□□□ -0.87
TVP23C-203ENST00000428082 Q6ZSA8 131 aa9.63□□□□□ -0.87
TVP23C-203ENST00000428082 SMIM26A0A096LP01 95 aa9.62□□□□□ -0.87
TVP23C-203ENST00000428082 KRTAP11-1Q8IUC1 163 aa9.62□□□□□ -0.87
TVP23C-203ENST00000428082 LRP1BQ9NZR2 4599 aa9.62□□□□□ -0.87
TVP23C-203ENST00000428082 DYNC1H1Q14204 4646 aaKnown RBP9.61□□□□□ -0.87
TVP23C-203ENST00000428082 Q5XG85 94 aa9.6□□□□□ -0.87
TVP23C-203ENST00000428082 PLAC8Q9NZF1 115 aa9.6□□□□□ -0.87
TVP23C-203ENST00000428082 A0A0G2JQZ4 141 aa9.59□□□□□ -0.87
TVP23C-203ENST00000428082 KRTAP13-1Q8IUC0 172 aa9.58□□□□□ -0.88
TVP23C-203ENST00000428082 CIRBP-AS1Q8TBR5 109 aa9.58□□□□□ -0.88
TVP23C-203ENST00000428082 RPL37AP61513 92 aaKnown RBP9.56□□□□□ -0.88
TVP23C-203ENST00000428082 ZCCHC13Q8WW36 166 aaKnown RBP9.55□□□□□ -0.88
TVP23C-203ENST00000428082 ZNF706Q9Y5V0 76 aaPredicted RBP9.55□□□□□ -0.88
TVP23C-203ENST00000428082 A8MWP4 228 aa9.54□□□□□ -0.88
TVP23C-203ENST00000428082 DEFB116Q30KQ4 102 aa9.54□□□□□ -0.88
TVP23C-203ENST00000428082 PRR15Q8IV56 129 aa9.54□□□□□ -0.88
TVP23C-203ENST00000428082 NDUFB1O75438 58 aa9.54□□□□□ -0.88
TVP23C-203ENST00000428082 MP68P56378 58 aa9.54□□□□□ -0.88
TVP23C-203ENST00000428082 LINC00472Q9H8W2 130 aa9.54□□□□□ -0.88
TVP23C-203ENST00000428082 C4orf26Q17RF5 130 aa9.53□□□□□ -0.88
TVP23C-203ENST00000428082 WFDC13Q8IUB5 93 aa9.52□□□□□ -0.89
TVP23C-203ENST00000428082 EPPK1P58107 5090 aaKnown RBP9.51□□□□□ -0.89
TVP23C-203ENST00000428082 KRTAP29-1A8MX34 341 aaPredicted RBP9.51□□□□□ -0.89
TVP23C-203ENST00000428082 CASC2Q6XLA1 102 aa9.51□□□□□ -0.89
TVP23C-203ENST00000428082 H3BPC8 53 aa9.5□□□□□ -0.89
TVP23C-203ENST00000428082 LINC00483Q53H64 154 aa9.5□□□□□ -0.89
TVP23C-203ENST00000428082 APOBP04114 4563 aaKnown RBP9.5□□□□□ -0.89
TVP23C-203ENST00000428082 HRCT1Q6UXD1 115 aa9.48□□□□□ -0.89
TVP23C-203ENST00000428082 FP248Q71RG6 208 aaPredicted RBP9.46□□□□□ -0.9
TVP23C-203ENST00000428082 PSORS1C2Q9UIG4 136 aa9.44□□□□□ -0.9
TVP23C-203ENST00000428082 IGLV9-49A0A0B4J1Y8 123 aa9.44□□□□□ -0.9
TVP23C-203ENST00000428082 hDV103S1A0JD37 113 aa9.44□□□□□ -0.9
TVP23C-203ENST00000428082 CYP4F30PQ9H0H9 118 aa9.43□□□□□ -0.9
TVP23C-203ENST00000428082 SMR3BP02814 79 aaPredicted RBP9.43□□□□□ -0.9
TVP23C-203ENST00000428082 TRAV22A0A0B4J277 110 aa9.41□□□□□ -0.9
TVP23C-203ENST00000428082 ZNF861PO60384 105 aa9.41□□□□□ -0.9
TVP23C-203ENST00000428082 H0Y9P7 68 aa9.41□□□□□ -0.9
TVP23C-203ENST00000428082 CDK2AP2O75956 126 aa9.4□□□□□ -0.9
TVP23C-203ENST00000428082 LINC00208Q96KT6 92 aa9.4□□□□□ -0.9
TVP23C-203ENST00000428082 MMP24-AS1A0A0U1RRL7 71 aa9.39□□□□□ -0.91
TVP23C-203ENST00000428082 MOBPQ13875 183 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms