RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 LINC00336Q6ZUF6 198 aa9.1□□□□□ -0.95
ERCC3-202ENST00000426778 RPL37AP61513 92 aaKnown RBP9.08□□□□□ -0.96
ERCC3-202ENST00000426778 K7EIL1 84 aa9.08□□□□□ -0.96
ERCC3-202ENST00000426778 KRTAP11-1Q8IUC1 163 aa9.08□□□□□ -0.96
ERCC3-202ENST00000426778 IGLV5-37A0A075B6J1 123 aa9.08□□□□□ -0.96
ERCC3-202ENST00000426778 NDUFC1O43677 76 aa9.08□□□□□ -0.96
ERCC3-202ENST00000426778 IGFL1Q6UW32 110 aa9.08□□□□□ -0.96
ERCC3-202ENST00000426778 WFDC13Q8IUB5 93 aa9.08□□□□□ -0.96
ERCC3-202ENST00000426778 PSCAO43653 123 aa9.07□□□□□ -0.96
ERCC3-202ENST00000426778 A0A087WSZ3 146 aa9.07□□□□□ -0.96
ERCC3-202ENST00000426778 SMIM26A0A096LP01 95 aa9.05□□□□□ -0.96
ERCC3-202ENST00000426778 PHF5AQ7RTV0 110 aaKnown RBP9.05□□□□□ -0.96
ERCC3-202ENST00000426778 SPRR4Q96PI1 79 aa9.05□□□□□ -0.96
ERCC3-202ENST00000426778 PLECQ15149 4684 aaKnown RBP9.05□□□□□ -0.96
ERCC3-202ENST00000426778 UBE2DNLQ8IWF7 75 aa9□□□□□ -0.97
ERCC3-202ENST00000426778 HCG22E2RYF7 251 aa8.99□□□□□ -0.97
ERCC3-202ENST00000426778 UBE2AP49459 152 aa8.99□□□□□ -0.97
ERCC3-202ENST00000426778 C16orf90A8MZG2 172 aa8.98□□□□□ -0.97
ERCC3-202ENST00000426778 BRK1Q8WUW1 75 aa8.96□□□□□ -0.97
ERCC3-202ENST00000426778 ATP5EP56381 51 aaPredicted RBP8.96□□□□□ -0.98
ERCC3-202ENST00000426778 PANO1I0J062 215 aa8.95□□□□□ -0.98
ERCC3-202ENST00000426778 FRAS1Q86XX4 4008 aa8.94□□□□□ -0.98
ERCC3-202ENST00000426778 C1orf64Q8NEQ6 169 aa8.93□□□□□ -0.98
ERCC3-202ENST00000426778 A0A1B0GW54 56 aa8.93□□□□□ -0.98
ERCC3-202ENST00000426778 TGP01266 2768 aa8.91□□□□□ -0.98
ERCC3-202ENST00000426778 PKIGQ9Y2B9 76 aa8.91□□□□□ -0.98
ERCC3-202ENST00000426778 LINC00208Q96KT6 92 aa8.91□□□□□ -0.98
ERCC3-202ENST00000426778 ZCCHC13Q8WW36 166 aaKnown RBP8.9□□□□□ -0.98
ERCC3-202ENST00000426778 LCE6AA0A183 80 aa8.9□□□□□ -0.99
ERCC3-202ENST00000426778 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.99
ERCC3-202ENST00000426778 hDV103S1A0JD37 113 aa8.88□□□□□ -0.99
ERCC3-202ENST00000426778 STARD9Q9P2P6 4700 aa8.88□□□□□ -0.99
ERCC3-202ENST00000426778 PRO0628Q9UI54 55 aa8.87□□□□□ -0.99
ERCC3-202ENST00000426778 IGLV9-49A0A0B4J1Y8 123 aa8.87□□□□□ -0.99
ERCC3-202ENST00000426778 H0Y9J4 135 aa8.86□□□□□ -0.99
ERCC3-202ENST00000426778 APLNQ9ULZ1 77 aa8.86□□□□□ -0.99
ERCC3-202ENST00000426778 PSPHP1O15172 72 aa8.86□□□□□ -0.99
ERCC3-202ENST00000426778 KMT2AQ03164 3969 aa8.86□□□□□ -0.99
ERCC3-202ENST00000426778 CASC2Q6XLA1 102 aa8.85□□□□□ -0.99
ERCC3-202ENST00000426778 IGLV8-61A0A075B6I0 122 aa8.83□□□□□ -1
ERCC3-202ENST00000426778 MP68P56378 58 aa8.82□□□□□ -1
ERCC3-202ENST00000426778 ANAPC11Q9NYG5 84 aa8.82□□□□□ -1
ERCC3-202ENST00000426778 HECTD4Q9Y4D8 3996 aa8.82□□□□□ -1
ERCC3-202ENST00000426778 H0Y9P7 68 aa8.82□□□□□ -1
ERCC3-202ENST00000426778 KRTAP29-1A8MX34 341 aaPredicted RBP8.81□□□□□ -1
ERCC3-202ENST00000426778 C9orf163Q8N9P6 203 aa8.81□□□□□ -1
ERCC3-202ENST00000426778 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.81□□□□□ -1
ERCC3-202ENST00000426778 PRR15Q8IV56 129 aa8.81□□□□□ -1
ERCC3-202ENST00000426778 PRKDCP78527 4128 aaKnown RBP8.8□□□□□ -1
ERCC3-202ENST00000426778 DYNC2H1Q8NCM8 4307 aaKnown RBP8.8□□□□□ -1
ERCC3-202ENST00000426778 LINC00472Q9H8W2 130 aa8.8□□□□□ -1
ERCC3-202ENST00000426778 DNAH8Q96JB1 4490 aa8.79□□□□□ -1
ERCC3-202ENST00000426778 TRAV22A0A0B4J277 110 aa8.79□□□□□ -1
ERCC3-202ENST00000426778 B9D2Q9BPU9 175 aa8.79□□□□□ -1
ERCC3-202ENST00000426778 MDFIQ99750 246 aa8.79□□□□□ -1
ERCC3-202ENST00000426778 DNAH2Q9P225 4427 aa8.78□□□□□ -1
ERCC3-202ENST00000426778 A8MWP4 228 aa8.77□□□□□ -1
ERCC3-202ENST00000426778 MEGF8Q7Z7M0 2845 aa8.77□□□□□ -1.01
ERCC3-202ENST00000426778 NBDYA0A0U1RRE5 68 aa8.77□□□□□ -1.01
ERCC3-202ENST00000426778 C14orf177Q52M58 125 aa8.76□□□□□ -1.01
ERCC3-202ENST00000426778 SPRR1BP22528 89 aa8.74□□□□□ -1.01
ERCC3-202ENST00000426778 PCOTHQ58A44 107 aa8.74□□□□□ -1.01
ERCC3-202ENST00000426778 FBN3Q75N90 2809 aa8.73□□□□□ -1.01
ERCC3-202ENST00000426778 DNAH17Q9UFH2 4485 aa8.73□□□□□ -1.01
ERCC3-202ENST00000426778 MMP24-AS1A0A0U1RRL7 71 aa8.72□□□□□ -1.01
ERCC3-202ENST00000426778 A8MU10 97 aa8.72□□□□□ -1.01
ERCC3-202ENST00000426778 A8MUN3 132 aa8.72□□□□□ -1.01
ERCC3-202ENST00000426778 VPS13DQ5THJ4 4388 aa8.72□□□□□ -1.01
ERCC3-202ENST00000426778 Q6ZRN7 208 aaPredicted RBP8.72□□□□□ -1.01
ERCC3-202ENST00000426778 MOBPQ13875 183 aa8.7□□□□□ -1.02
ERCC3-202ENST00000426778 KRTAP13-1Q8IUC0 172 aa8.7□□□□□ -1.02
ERCC3-202ENST00000426778 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
ERCC3-202ENST00000426778 NDUFB1O75438 58 aa8.7□□□□□ -1.02
ERCC3-202ENST00000426778 IGHV6-1A0A0B4J1U7 121 aa8.7□□□□□ -1.02
ERCC3-202ENST00000426778 NDUFS5O43920 106 aa8.7□□□□□ -1.02
ERCC3-202ENST00000426778 DNAH6Q9C0G6 4158 aa8.68□□□□□ -1.02
ERCC3-202ENST00000426778 Q1T7F1 81 aa8.68□□□□□ -1.02
ERCC3-202ENST00000426778 Q96NJ1 140 aa8.68□□□□□ -1.02
ERCC3-202ENST00000426778 A0A087X002 238 aa8.67□□□□□ -1.02
ERCC3-202ENST00000426778 NOTCH2NLQ7Z3S9 236 aa8.67□□□□□ -1.02
ERCC3-202ENST00000426778 SPACA4Q8TDM5 124 aa8.67□□□□□ -1.02
ERCC3-202ENST00000426778 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
ERCC3-202ENST00000426778 SPINK6Q6UWN8 80 aa8.65□□□□□ -1.03
ERCC3-202ENST00000426778 A0A087WTM6 91 aa8.63□□□□□ -1.03
ERCC3-202ENST00000426778 C1orf195Q5TG92 126 aa8.62□□□□□ -1.03
ERCC3-202ENST00000426778 RTL8CO15255 209 aa8.61□□□□□ -1.03
ERCC3-202ENST00000426778 C8orf17Q9NRJ1 99 aa8.61□□□□□ -1.03
ERCC3-202ENST00000426778 CD164Q04900 197 aa8.6□□□□□ -1.03
ERCC3-202ENST00000426778 WWC2-AS2Q96NR7 200 aa8.6□□□□□ -1.03
ERCC3-202ENST00000426778 DNAH11Q96DT5 4516 aa8.59□□□□□ -1.03
ERCC3-202ENST00000426778 PRR15LQ9BU68 103 aa8.59□□□□□ -1.03
ERCC3-202ENST00000426778 NUPR2A6NF83 97 aa8.59□□□□□ -1.03
ERCC3-202ENST00000426778 Q5VV11 94 aa8.58□□□□□ -1.04
ERCC3-202ENST00000426778 COA5Q86WW8 74 aa8.58□□□□□ -1.04
ERCC3-202ENST00000426778 Q8N9P0 234 aaPredicted RBP8.58□□□□□ -1.04
ERCC3-202ENST00000426778 SPANXA2-OT1Q8N9U9 137 aa8.57□□□□□ -1.04
ERCC3-202ENST00000426778 DNHD1Q96M86 4753 aa8.56□□□□□ -1.04
ERCC3-202ENST00000426778 IGLV5-52A0A0A0MRZ9 124 aa8.56□□□□□ -1.04
ERCC3-202ENST00000426778 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
ERCC3-202ENST00000426778 CDK2AP2O75956 126 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms