RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 Q75L30 129 aa7.25□□□□□ -1.25
SEC61A1-202ENST00000424880 EGFEM1PQ0D2K5 195 aa7.25□□□□□ -1.25
SEC61A1-202ENST00000424880 SPANXA2-OT1Q8N9U9 137 aa7.24□□□□□ -1.25
SEC61A1-202ENST00000424880 A0A087WSZ3 146 aa7.23□□□□□ -1.25
SEC61A1-202ENST00000424880 LOC101927531A0A1B0GV80 90 aa7.23□□□□□ -1.25
SEC61A1-202ENST00000424880 MP68P56378 58 aa7.23□□□□□ -1.25
SEC61A1-202ENST00000424880 KCNQ1DNQ9H478 68 aa7.23□□□□□ -1.25
SEC61A1-202ENST00000424880 Q6ZRX8 168 aa7.22□□□□□ -1.25
SEC61A1-202ENST00000424880 A0A096LNI7 61 aa7.22□□□□□ -1.25
SEC61A1-202ENST00000424880 C4orf48Q5BLP8 95 aa7.22□□□□□ -1.25
SEC61A1-202ENST00000424880 APOC4P55056 127 aa7.2□□□□□ -1.26
SEC61A1-202ENST00000424880 PCOTHQ58A44 107 aa7.2□□□□□ -1.26
SEC61A1-202ENST00000424880 LINC00476Q8WZB0 136 aa7.2□□□□□ -1.26
SEC61A1-202ENST00000424880 H0Y9P7 68 aa7.2□□□□□ -1.26
SEC61A1-202ENST00000424880 TNP2Q05952 138 aa7.2□□□□□ -1.26
SEC61A1-202ENST00000424880 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
SEC61A1-202ENST00000424880 SPAG11AQ6PDA7 123 aa7.2□□□□□ -1.26
SEC61A1-202ENST00000424880 SPRR4Q96PI1 79 aa7.2□□□□□ -1.26
SEC61A1-202ENST00000424880 Q8NAQ8 132 aa7.19□□□□□ -1.26
SEC61A1-202ENST00000424880 CDC42SE1Q9NRR8 79 aa7.19□□□□□ -1.26
SEC61A1-202ENST00000424880 SPART-AS1P0CW21 52 aa7.18□□□□□ -1.26
SEC61A1-202ENST00000424880 KRTAP26-1Q6PEX3 210 aa7.18□□□□□ -1.26
SEC61A1-202ENST00000424880 COL6A5A8TX70 2615 aa7.18□□□□□ -1.26
SEC61A1-202ENST00000424880 C11orf45Q8TAV5 145 aa7.18□□□□□ -1.26
SEC61A1-202ENST00000424880 PRLHP81277 87 aa7.17□□□□□ -1.26
SEC61A1-202ENST00000424880 CASC10Q5T4H9 136 aa7.17□□□□□ -1.26
SEC61A1-202ENST00000424880 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
SEC61A1-202ENST00000424880 ANK2Q01484 3957 aa7.16□□□□□ -1.26
SEC61A1-202ENST00000424880 H3BPC8 53 aa7.16□□□□□ -1.26
SEC61A1-202ENST00000424880 KRTAP7-1Q8IUC3 87 aa7.16□□□□□ -1.26
SEC61A1-202ENST00000424880 NOTCH1P46531 2555 aa7.15□□□□□ -1.26
SEC61A1-202ENST00000424880 DHRS4-AS1Q9P1J3 65 aa7.15□□□□□ -1.26
SEC61A1-202ENST00000424880 COA5Q86WW8 74 aa7.14□□□□□ -1.27
SEC61A1-202ENST00000424880 IGLV1-50A0A075B6I6 118 aa7.14□□□□□ -1.27
SEC61A1-202ENST00000424880 CASC2Q6XLA1 102 aa7.14□□□□□ -1.27
SEC61A1-202ENST00000424880 C8orf87E5RJ46 101 aa7.13□□□□□ -1.27
SEC61A1-202ENST00000424880 KRTAP4-16G5E9R7 235 aaPredicted RBP7.13□□□□□ -1.27
SEC61A1-202ENST00000424880 STAB1Q9NY15 2570 aa7.13□□□□□ -1.27
SEC61A1-202ENST00000424880 TENM2Q9NT68 2774 aa7.12□□□□□ -1.27
SEC61A1-202ENST00000424880 KRTAP24-1Q3LI83 254 aa7.12□□□□□ -1.27
SEC61A1-202ENST00000424880 MOBPQ13875 183 aa7.12□□□□□ -1.27
SEC61A1-202ENST00000424880 PLAC8Q9NZF1 115 aa7.12□□□□□ -1.27
SEC61A1-202ENST00000424880 LYSTQ99698 3801 aa7.11□□□□□ -1.27
SEC61A1-202ENST00000424880 C9orf163Q8N9P6 203 aa7.11□□□□□ -1.27
SEC61A1-202ENST00000424880 H0Y9J4 135 aa7.11□□□□□ -1.27
SEC61A1-202ENST00000424880 SPINK7P58062 85 aa7.11□□□□□ -1.27
SEC61A1-202ENST00000424880 PRAC1Q96KF2 57 aa7.1□□□□□ -1.27
SEC61A1-202ENST00000424880 IGKV2-24A0A0C4DH68 120 aa7.1□□□□□ -1.27
SEC61A1-202ENST00000424880 NBEAL1Q6ZS30 2694 aa7.1□□□□□ -1.27
SEC61A1-202ENST00000424880 KRTAP29-1A8MX34 341 aaPredicted RBP7.09□□□□□ -1.27
SEC61A1-202ENST00000424880 CNBPP62633 177 aaKnown RBP7.09□□□□□ -1.27
SEC61A1-202ENST00000424880 CMYA5Q8N3K9 4069 aa7.09□□□□□ -1.28
SEC61A1-202ENST00000424880 MDFIQ99750 246 aa7.08□□□□□ -1.28
SEC61A1-202ENST00000424880 LINC01558Q9Y6Z2 57 aa7.08□□□□□ -1.28
SEC61A1-202ENST00000424880 ADM2Q7Z4H4 148 aa7.07□□□□□ -1.28
SEC61A1-202ENST00000424880 DNAH10Q8IVF4 4471 aa7.06□□□□□ -1.28
SEC61A1-202ENST00000424880 SPRR1AP35321 89 aa7.06□□□□□ -1.28
SEC61A1-202ENST00000424880 IGLV7-46A0A075B6I9 117 aa7.05□□□□□ -1.28
SEC61A1-202ENST00000424880 OXLD1Q5BKU9 147 aa7.05□□□□□ -1.28
SEC61A1-202ENST00000424880 REG3GQ6UW15 175 aa7.05□□□□□ -1.28
SEC61A1-202ENST00000424880 KRTAP10-11P60412 298 aa7.02□□□□□ -1.29
SEC61A1-202ENST00000424880 PLA2G2DQ9UNK4 145 aa7.01□□□□□ -1.29
SEC61A1-202ENST00000424880 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
SEC61A1-202ENST00000424880 IGLV5-37A0A075B6J1 123 aa6.99□□□□□ -1.29
SEC61A1-202ENST00000424880 LINC00313P59037 77 aa6.99□□□□□ -1.29
SEC61A1-202ENST00000424880 KRTAP11-1Q8IUC1 163 aa6.99□□□□□ -1.29
SEC61A1-202ENST00000424880 TLX1NBP0CAT3 122 aa6.98□□□□□ -1.29
SEC61A1-202ENST00000424880 A8MWP4 228 aa6.97□□□□□ -1.29
SEC61A1-202ENST00000424880 DEFB131BA0A096LNP1 70 aa6.97□□□□□ -1.29
SEC61A1-202ENST00000424880 DNAH3Q8TD57 4116 aa6.97□□□□□ -1.29
SEC61A1-202ENST00000424880 K7EIL1 84 aa6.97□□□□□ -1.29
SEC61A1-202ENST00000424880 CHTF8P0CG12 524 aa6.97□□□□□ -1.29
SEC61A1-202ENST00000424880 H3BS24 57 aa6.96□□□□□ -1.29
SEC61A1-202ENST00000424880 HRES1P13985 223 aa6.96□□□□□ -1.3
SEC61A1-202ENST00000424880 LINC01556Q5JQF7 62 aa6.96□□□□□ -1.3
SEC61A1-202ENST00000424880 MMP24-AS1A0A0U1RRL7 71 aa6.95□□□□□ -1.3
SEC61A1-202ENST00000424880 LINC00472Q9H8W2 130 aa6.95□□□□□ -1.3
SEC61A1-202ENST00000424880 IGLV8-61A0A075B6I0 122 aa6.95□□□□□ -1.3
SEC61A1-202ENST00000424880 ASB16-AS1Q495Z4 193 aa6.94□□□□□ -1.3
SEC61A1-202ENST00000424880 PLA2G1BP04054 148 aaKnown RBP6.93□□□□□ -1.3
SEC61A1-202ENST00000424880 LINC01554Q52M75 96 aa6.93□□□□□ -1.3
SEC61A1-202ENST00000424880 IGHV6-1A0A0B4J1U7 121 aa6.93□□□□□ -1.3
SEC61A1-202ENST00000424880 IGLV9-49A0A0B4J1Y8 123 aa6.93□□□□□ -1.3
SEC61A1-202ENST00000424880 A0A087X002 238 aa6.92□□□□□ -1.3
SEC61A1-202ENST00000424880 DNHD1Q96M86 4753 aa6.92□□□□□ -1.3
SEC61A1-202ENST00000424880 NOTCH2NLQ7Z3S9 236 aa6.9□□□□□ -1.3
SEC61A1-202ENST00000424880 H3BNG1 76 aa6.9□□□□□ -1.31
SEC61A1-202ENST00000424880 MGAM2Q2M2H8 2515 aa6.9□□□□□ -1.31
SEC61A1-202ENST00000424880 ANAPC11Q9NYG5 84 aa6.86□□□□□ -1.31
SEC61A1-202ENST00000424880 DNAH10OSP0CZ25 163 aa6.86□□□□□ -1.31
SEC61A1-202ENST00000424880 STAB2Q8WWQ8 2551 aa6.85□□□□□ -1.31
SEC61A1-202ENST00000424880 Q6ZR54 194 aa6.85□□□□□ -1.31
SEC61A1-202ENST00000424880 RETNLBQ9BQ08 111 aa6.85□□□□□ -1.31
SEC61A1-202ENST00000424880 HUWE1Q7Z6Z7 4374 aaKnown RBP6.84□□□□□ -1.31
SEC61A1-202ENST00000424880 DNAH9Q9NYC9 4486 aa6.84□□□□□ -1.31
SEC61A1-202ENST00000424880 TP53AIP1Q9HCN2 124 aa6.84□□□□□ -1.31
SEC61A1-202ENST00000424880 SPINK6Q6UWN8 80 aa6.83□□□□□ -1.32
SEC61A1-202ENST00000424880 RTL8CO15255 209 aa6.83□□□□□ -1.32
SEC61A1-202ENST00000424880 FRAS1Q86XX4 4008 aa6.83□□□□□ -1.32
SEC61A1-202ENST00000424880 C8orf17Q9NRJ1 99 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms