RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 CNBPP62633 177 aaKnown RBP6.92□□□□□ -1.3
DDX56-203ENST00000421223 CXCL6P80162 114 aa6.92□□□□□ -1.3
DDX56-203ENST00000421223 C20orf197Q8N268 126 aa6.92□□□□□ -1.3
DDX56-203ENST00000421223 MEGF8Q7Z7M0 2845 aa6.92□□□□□ -1.3
DDX56-203ENST00000421223 KRTAP11-1Q8IUC1 163 aa6.92□□□□□ -1.3
DDX56-203ENST00000421223 MPLKIPQ8TAP9 179 aa6.91□□□□□ -1.3
DDX56-203ENST00000421223 F8WEM9 126 aa6.91□□□□□ -1.3
DDX56-203ENST00000421223 BPY2O14599 106 aa6.91□□□□□ -1.3
DDX56-203ENST00000421223 BCE1O60756 84 aa6.91□□□□□ -1.3
DDX56-203ENST00000421223 DNAH1Q9P2D7 4330 aa6.91□□□□□ -1.3
DDX56-203ENST00000421223 PANO1I0J062 215 aa6.9□□□□□ -1.3
DDX56-203ENST00000421223 A0A1W2PNM2 257 aa6.9□□□□□ -1.31
DDX56-203ENST00000421223 UBE2AP49459 152 aa6.89□□□□□ -1.31
DDX56-203ENST00000421223 DEFB116Q30KQ4 102 aa6.89□□□□□ -1.31
DDX56-203ENST00000421223 LRCOL1A6NCL2 159 aa6.89□□□□□ -1.31
DDX56-203ENST00000421223 C9orf163Q8N9P6 203 aa6.88□□□□□ -1.31
DDX56-203ENST00000421223 IGLV5-48A0A075B6I7 105 aa6.88□□□□□ -1.31
DDX56-203ENST00000421223 SNURFQ9Y675 71 aa6.88□□□□□ -1.31
DDX56-203ENST00000421223 PRKDCP78527 4128 aaKnown RBP6.88□□□□□ -1.31
DDX56-203ENST00000421223 TRAV7A0A075B6U4 112 aa6.87□□□□□ -1.31
DDX56-203ENST00000421223 EPM2AB3EWF7 344 aa6.87□□□□□ -1.31
DDX56-203ENST00000421223 LINC00476Q8WZB0 136 aa6.87□□□□□ -1.31
DDX56-203ENST00000421223 DNHD1Q96M86 4753 aa6.87□□□□□ -1.31
DDX56-203ENST00000421223 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.85□□□□□ -1.31
DDX56-203ENST00000421223 LY6G6CO95867 125 aa6.84□□□□□ -1.31
DDX56-203ENST00000421223 SMIM29Q86T20 159 aa6.84□□□□□ -1.31
DDX56-203ENST00000421223 STARD9Q9P2P6 4700 aa6.84□□□□□ -1.31
DDX56-203ENST00000421223 PRR15Q8IV56 129 aa6.84□□□□□ -1.31
DDX56-203ENST00000421223 Q8NBF4 154 aa6.84□□□□□ -1.31
DDX56-203ENST00000421223 C8orf87E5RJ46 101 aa6.84□□□□□ -1.32
DDX56-203ENST00000421223 Q6ZRN7 208 aaPredicted RBP6.84□□□□□ -1.32
DDX56-203ENST00000421223 TNP2Q05952 138 aa6.82□□□□□ -1.32
DDX56-203ENST00000421223 IGFL1Q6UW32 110 aa6.82□□□□□ -1.32
DDX56-203ENST00000421223 A0A087WSZ3 146 aa6.82□□□□□ -1.32
DDX56-203ENST00000421223 A0A087WTM6 91 aa6.82□□□□□ -1.32
DDX56-203ENST00000421223 IGKV4-1P06312 121 aa6.82□□□□□ -1.32
DDX56-203ENST00000421223 H7BZZ5 65 aa6.81□□□□□ -1.32
DDX56-203ENST00000421223 KLKP1Q107X0 134 aa6.81□□□□□ -1.32
DDX56-203ENST00000421223 RTL8CO15255 209 aa6.79□□□□□ -1.32
DDX56-203ENST00000421223 IGLV9-49A0A0B4J1Y8 123 aa6.79□□□□□ -1.32
DDX56-203ENST00000421223 FBN3Q75N90 2809 aa6.79□□□□□ -1.32
DDX56-203ENST00000421223 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
DDX56-203ENST00000421223 K7EQZ3 153 aa6.77□□□□□ -1.33
DDX56-203ENST00000421223 RPL37AP61513 92 aaKnown RBP6.77□□□□□ -1.33
DDX56-203ENST00000421223 KMT2AQ03164 3969 aa6.77□□□□□ -1.33
DDX56-203ENST00000421223 IGLV5-52A0A0A0MRZ9 124 aa6.76□□□□□ -1.33
DDX56-203ENST00000421223 C1orf134Q5TEV5 83 aa6.76□□□□□ -1.33
DDX56-203ENST00000421223 ANAPC11Q9NYG5 84 aa6.76□□□□□ -1.33
DDX56-203ENST00000421223 A0A1B0GW54 56 aa6.76□□□□□ -1.33
DDX56-203ENST00000421223 SPRR4Q96PI1 79 aa6.76□□□□□ -1.33
DDX56-203ENST00000421223 WFDC13Q8IUB5 93 aa6.75□□□□□ -1.33
DDX56-203ENST00000421223 SPACA4Q8TDM5 124 aa6.75□□□□□ -1.33
DDX56-203ENST00000421223 DSCR10P59022 87 aa6.74□□□□□ -1.33
DDX56-203ENST00000421223 KTN1-AS1Q86SY8 53 aa6.74□□□□□ -1.33
DDX56-203ENST00000421223 FAM229BQ4G0N7 80 aa6.73□□□□□ -1.33
DDX56-203ENST00000421223 OCR1Q9BZK8 76 aa6.73□□□□□ -1.33
DDX56-203ENST00000421223 DYNC2H1Q8NCM8 4307 aaKnown RBP6.73□□□□□ -1.33
DDX56-203ENST00000421223 PSORS1C2Q9UIG4 136 aa6.72□□□□□ -1.33
DDX56-203ENST00000421223 KRTAP21-3Q3LHN1 58 aa6.71□□□□□ -1.33
DDX56-203ENST00000421223 Q6ZR54 194 aa6.71□□□□□ -1.33
DDX56-203ENST00000421223 VPS13DQ5THJ4 4388 aa6.71□□□□□ -1.34
DDX56-203ENST00000421223 NDUFC1O43677 76 aa6.71□□□□□ -1.34
DDX56-203ENST00000421223 TMEM254Q8TBM7 123 aa6.71□□□□□ -1.34
DDX56-203ENST00000421223 H0Y9J4 135 aa6.69□□□□□ -1.34
DDX56-203ENST00000421223 HCG22E2RYF7 251 aa6.67□□□□□ -1.34
DDX56-203ENST00000421223 IGLV8-61A0A075B6I0 122 aa6.66□□□□□ -1.34
DDX56-203ENST00000421223 MOBPQ13875 183 aa6.66□□□□□ -1.34
DDX56-203ENST00000421223 A0A0A0MQY5 61 aa6.66□□□□□ -1.34
DDX56-203ENST00000421223 DNAH2Q9P225 4427 aa6.66□□□□□ -1.34
DDX56-203ENST00000421223 KRTAP13-1Q8IUC0 172 aa6.66□□□□□ -1.34
DDX56-203ENST00000421223 SPRR1BP22528 89 aa6.65□□□□□ -1.34
DDX56-203ENST00000421223 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
DDX56-203ENST00000421223 A8MU10 97 aa6.64□□□□□ -1.35
DDX56-203ENST00000421223 ATP5EP56381 51 aaPredicted RBP6.64□□□□□ -1.35
DDX56-203ENST00000421223 LCE6AA0A183 80 aa6.64□□□□□ -1.35
DDX56-203ENST00000421223 A8MUN3 132 aa6.63□□□□□ -1.35
DDX56-203ENST00000421223 SPTSSBQ8NFR3 76 aa6.63□□□□□ -1.35
DDX56-203ENST00000421223 PSPHP1O15172 72 aa6.63□□□□□ -1.35
DDX56-203ENST00000421223 PLAC8Q9NZF1 115 aa6.63□□□□□ -1.35
DDX56-203ENST00000421223 ZNF861PO60384 105 aa6.62□□□□□ -1.35
DDX56-203ENST00000421223 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
DDX56-203ENST00000421223 PRR4Q16378 134 aa6.61□□□□□ -1.35
DDX56-203ENST00000421223 WWC2-AS2Q96NR7 200 aa6.61□□□□□ -1.35
DDX56-203ENST00000421223 FRAS1Q86XX4 4008 aa6.61□□□□□ -1.35
DDX56-203ENST00000421223 SPINK6Q6UWN8 80 aa6.6□□□□□ -1.35
DDX56-203ENST00000421223 CASC2Q6XLA1 102 aa6.6□□□□□ -1.35
DDX56-203ENST00000421223 CIRBP-AS1Q8TBR5 109 aa6.6□□□□□ -1.35
DDX56-203ENST00000421223 ZNF706Q9Y5V0 76 aaPredicted RBP6.6□□□□□ -1.35
DDX56-203ENST00000421223 LINC00472Q9H8W2 130 aa6.59□□□□□ -1.35
DDX56-203ENST00000421223 NDUFS5O43920 106 aa6.58□□□□□ -1.36
DDX56-203ENST00000421223 NDUFB1O75438 58 aa6.58□□□□□ -1.36
DDX56-203ENST00000421223 A8MWP4 228 aa6.58□□□□□ -1.36
DDX56-203ENST00000421223 LCE2DQ5TA82 110 aaPredicted RBP6.58□□□□□ -1.36
DDX56-203ENST00000421223 IGLV7-43P04211 117 aa6.57□□□□□ -1.36
DDX56-203ENST00000421223 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
DDX56-203ENST00000421223 ZCCHC13Q8WW36 166 aaKnown RBP6.57□□□□□ -1.36
DDX56-203ENST00000421223 LINC00208Q96KT6 92 aa6.57□□□□□ -1.36
DDX56-203ENST00000421223 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
DDX56-203ENST00000421223 DNAH11Q96DT5 4516 aa6.55□□□□□ -1.36
DDX56-203ENST00000421223 DNAH17Q9UFH2 4485 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms