RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 DNAH5Q8TE73 4624 aa8.26□□□□□ -1.09
LINC00642-201ENST00000419459 BRK1Q8WUW1 75 aa8.25□□□□□ -1.09
LINC00642-201ENST00000419459 XAGE1AQ9HD64 81 aa8.25□□□□□ -1.09
LINC00642-201ENST00000419459 F8WDY8 70 aa8.24□□□□□ -1.09
LINC00642-201ENST00000419459 SYCNQ0VAF6 134 aa8.22□□□□□ -1.09
LINC00642-201ENST00000419459 IGLV5-48A0A075B6I7 105 aa8.21□□□□□ -1.1
LINC00642-201ENST00000419459 KRTAP10-2P60368 255 aa8.21□□□□□ -1.1
LINC00642-201ENST00000419459 PKIGQ9Y2B9 76 aa8.21□□□□□ -1.1
LINC00642-201ENST00000419459 FAM229BQ4G0N7 80 aa8.2□□□□□ -1.1
LINC00642-201ENST00000419459 C14orf177Q52M58 125 aa8.2□□□□□ -1.1
LINC00642-201ENST00000419459 Q8N9L7 120 aa8.2□□□□□ -1.1
LINC00642-201ENST00000419459 C1orf195Q5TG92 126 aa8.19□□□□□ -1.1
LINC00642-201ENST00000419459 CNBPP62633 177 aaKnown RBP8.19□□□□□ -1.1
LINC00642-201ENST00000419459 MPLKIPQ8TAP9 179 aa8.18□□□□□ -1.1
LINC00642-201ENST00000419459 HIGD2AQ9BW72 106 aa8.18□□□□□ -1.1
LINC00642-201ENST00000419459 hDV103S1A0JD37 113 aa8.17□□□□□ -1.1
LINC00642-201ENST00000419459 Q6ZRP5 223 aa8.17□□□□□ -1.1
LINC00642-201ENST00000419459 IGLV5-52A0A0A0MRZ9 124 aa8.16□□□□□ -1.1
LINC00642-201ENST00000419459 KCNQ1DNQ9H478 68 aa8.16□□□□□ -1.1
LINC00642-201ENST00000419459 Q1T7F1 81 aa8.15□□□□□ -1.1
LINC00642-201ENST00000419459 V9GYY9 64 aa8.15□□□□□ -1.1
LINC00642-201ENST00000419459 C9orf163Q8N9P6 203 aa8.15□□□□□ -1.11
LINC00642-201ENST00000419459 IGKV2-24A0A0C4DH68 120 aa8.14□□□□□ -1.11
LINC00642-201ENST00000419459 CHTF8P0CG12 524 aa8.14□□□□□ -1.11
LINC00642-201ENST00000419459 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
LINC00642-201ENST00000419459 DHRS4-AS1Q9P1J3 65 aa8.14□□□□□ -1.11
LINC00642-201ENST00000419459 Q8N377 158 aa8.13□□□□□ -1.11
LINC00642-201ENST00000419459 LRP1BQ9NZR2 4599 aa8.13□□□□□ -1.11
LINC00642-201ENST00000419459 A0A096LNI7 61 aa8.13□□□□□ -1.11
LINC00642-201ENST00000419459 PRR15Q8IV56 129 aa8.13□□□□□ -1.11
LINC00642-201ENST00000419459 ZCCHC13Q8WW36 166 aaKnown RBP8.13□□□□□ -1.11
LINC00642-201ENST00000419459 DNAH8Q96JB1 4490 aa8.13□□□□□ -1.11
LINC00642-201ENST00000419459 PANO1I0J062 215 aa8.12□□□□□ -1.11
LINC00642-201ENST00000419459 EPPK1P58107 5090 aaKnown RBP8.11□□□□□ -1.11
LINC00642-201ENST00000419459 ETDCA0A1B0GVM5 59 aa8.11□□□□□ -1.11
LINC00642-201ENST00000419459 A0A1B0GVY2 172 aa8.11□□□□□ -1.11
LINC00642-201ENST00000419459 CYP4F30PQ9H0H9 118 aa8.11□□□□□ -1.11
LINC00642-201ENST00000419459 NKAPP1Q8N9T2 125 aa8.1□□□□□ -1.11
LINC00642-201ENST00000419459 Q8NBF4 154 aa8.1□□□□□ -1.11
LINC00642-201ENST00000419459 SPRR4Q96PI1 79 aa8.1□□□□□ -1.11
LINC00642-201ENST00000419459 FAM30AQ9NZY2 134 aa8.1□□□□□ -1.11
LINC00642-201ENST00000419459 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
LINC00642-201ENST00000419459 PLA2G2DQ9UNK4 145 aa8.1□□□□□ -1.11
LINC00642-201ENST00000419459 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.11
LINC00642-201ENST00000419459 A0A1W2PNM2 257 aa8.08□□□□□ -1.12
LINC00642-201ENST00000419459 NDUFB1O75438 58 aa8.08□□□□□ -1.12
LINC00642-201ENST00000419459 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
LINC00642-201ENST00000419459 Q6ZRX8 168 aa8.08□□□□□ -1.12
LINC00642-201ENST00000419459 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
LINC00642-201ENST00000419459 DYNC1H1Q14204 4646 aaKnown RBP8.08□□□□□ -1.12
LINC00642-201ENST00000419459 C1orf137Q5JT78 98 aa8.08□□□□□ -1.12
LINC00642-201ENST00000419459 C16orf90A8MZG2 172 aa8.07□□□□□ -1.12
LINC00642-201ENST00000419459 KRTAP10-1P60331 282 aa8.07□□□□□ -1.12
LINC00642-201ENST00000419459 DEFB105AQ8NG35 78 aa8.07□□□□□ -1.12
LINC00642-201ENST00000419459 SERTAD4-AS1Q5TG53 156 aa8.06□□□□□ -1.12
LINC00642-201ENST00000419459 C7orf33Q8WU49 177 aa8.06□□□□□ -1.12
LINC00642-201ENST00000419459 DSCR10P59022 87 aa8.05□□□□□ -1.12
LINC00642-201ENST00000419459 KRTAP7-1Q8IUC3 87 aa8.05□□□□□ -1.12
LINC00642-201ENST00000419459 IGLV5-37A0A075B6J1 123 aa8.05□□□□□ -1.12
LINC00642-201ENST00000419459 KRTAP4-16G5E9R7 235 aaPredicted RBP8.05□□□□□ -1.12
LINC00642-201ENST00000419459 SPRR1AP35321 89 aa8.05□□□□□ -1.12
LINC00642-201ENST00000419459 A0A1W2PNN7 141 aa8.04□□□□□ -1.12
LINC00642-201ENST00000419459 SEC61GP60059 68 aa8.04□□□□□ -1.12
LINC00642-201ENST00000419459 HCG22E2RYF7 251 aa8.03□□□□□ -1.12
LINC00642-201ENST00000419459 SPACA4Q8TDM5 124 aa8.03□□□□□ -1.12
LINC00642-201ENST00000419459 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
LINC00642-201ENST00000419459 Q9BRP9 147 aa8.02□□□□□ -1.13
LINC00642-201ENST00000419459 K7EQZ3 153 aa8.01□□□□□ -1.13
LINC00642-201ENST00000419459 IGLV1-50A0A075B6I6 118 aa8□□□□□ -1.13
LINC00642-201ENST00000419459 PMAIP1Q13794 54 aa8□□□□□ -1.13
LINC00642-201ENST00000419459 TRAV22A0A0B4J277 110 aa7.99□□□□□ -1.13
LINC00642-201ENST00000419459 MP68P56378 58 aa7.98□□□□□ -1.13
LINC00642-201ENST00000419459 Q6ZSA8 131 aa7.98□□□□□ -1.13
LINC00642-201ENST00000419459 H3BPC8 53 aa7.98□□□□□ -1.13
LINC00642-201ENST00000419459 RPL37AP8A6NKH3 93 aa7.97□□□□□ -1.13
LINC00642-201ENST00000419459 PHF5AQ7RTV0 110 aaKnown RBP7.97□□□□□ -1.13
LINC00642-201ENST00000419459 SPANXA2-OT1Q8N9U9 137 aa7.97□□□□□ -1.13
LINC00642-201ENST00000419459 CIRBP-AS1Q8TBR5 109 aa7.97□□□□□ -1.13
LINC00642-201ENST00000419459 VPS13BQ7Z7G8 4022 aa7.97□□□□□ -1.13
LINC00642-201ENST00000419459 SRRM2Q9UQ35 2752 aaKnown RBP7.97□□□□□ -1.13
LINC00642-201ENST00000419459 MRPL55Q7Z7F7 128 aaKnown RBP7.95□□□□□ -1.14
LINC00642-201ENST00000419459 KRTAP11-1Q8IUC1 163 aa7.95□□□□□ -1.14
LINC00642-201ENST00000419459 ST20-AS1Q8NBB2 130 aa7.95□□□□□ -1.14
LINC00642-201ENST00000419459 FAT1Q14517 4588 aa7.94□□□□□ -1.14
LINC00642-201ENST00000419459 HSPG2P98160 4391 aa7.93□□□□□ -1.14
LINC00642-201ENST00000419459 PLAC8Q9NZF1 115 aa7.93□□□□□ -1.14
LINC00642-201ENST00000419459 KIAA1109Q2LD37 5005 aa7.93□□□□□ -1.14
LINC00642-201ENST00000419459 PSPHP1O15172 72 aa7.93□□□□□ -1.14
LINC00642-201ENST00000419459 IGLV8-61A0A075B6I0 122 aa7.91□□□□□ -1.14
LINC00642-201ENST00000419459 LIMD2Q9BT23 127 aa7.91□□□□□ -1.14
LINC00642-201ENST00000419459 UBE2BP63146 152 aa7.91□□□□□ -1.14
LINC00642-201ENST00000419459 KRTAP29-1A8MX34 341 aaPredicted RBP7.89□□□□□ -1.15
LINC00642-201ENST00000419459 REG3GQ6UW15 175 aa7.89□□□□□ -1.15
LINC00642-201ENST00000419459 SMR3BP02814 79 aaPredicted RBP7.88□□□□□ -1.15
LINC00642-201ENST00000419459 IGFL1Q6UW32 110 aa7.88□□□□□ -1.15
LINC00642-201ENST00000419459 A8MUN3 132 aa7.88□□□□□ -1.15
LINC00642-201ENST00000419459 UBE2AP49459 152 aa7.88□□□□□ -1.15
LINC00642-201ENST00000419459 LINC00208Q96KT6 92 aa7.88□□□□□ -1.15
LINC00642-201ENST00000419459 Q5VV11 94 aa7.87□□□□□ -1.15
LINC00642-201ENST00000419459 PRR4Q16378 134 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms