RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 IGLV7-43P04211 117 aa5.23□□□□□ -1.57
USP54-203ENST00000418501 PSORS1C2Q9UIG4 136 aa5.23□□□□□ -1.57
USP54-203ENST00000418501 KRTAP7-1Q8IUC3 87 aa5.23□□□□□ -1.57
USP54-203ENST00000418501 LINC01547P58512 204 aaPredicted RBP5.22□□□□□ -1.57
USP54-203ENST00000418501 SPRR4Q96PI1 79 aa5.22□□□□□ -1.57
USP54-203ENST00000418501 ERC2-IT1O76042 136 aa5.22□□□□□ -1.57
USP54-203ENST00000418501 C4orf48Q5BLP8 95 aa5.22□□□□□ -1.57
USP54-203ENST00000418501 SSBP3-AS1Q7Z2R9 100 aa5.2□□□□□ -1.58
USP54-203ENST00000418501 IGLV9-49A0A0B4J1Y8 123 aa5.2□□□□□ -1.58
USP54-203ENST00000418501 HRCT1Q6UXD1 115 aa5.2□□□□□ -1.58
USP54-203ENST00000418501 PKD1L1Q8TDX9 2849 aa5.19□□□□□ -1.58
USP54-203ENST00000418501 IGFL1Q6UW32 110 aa5.19□□□□□ -1.58
USP54-203ENST00000418501 SERP2Q8N6R1 65 aa5.19□□□□□ -1.58
USP54-203ENST00000418501 A0A087WSZ3 146 aa5.18□□□□□ -1.58
USP54-203ENST00000418501 LINC00483Q53H64 154 aa5.18□□□□□ -1.58
USP54-203ENST00000418501 CIRBP-AS1Q8TBR5 109 aa5.18□□□□□ -1.58
USP54-203ENST00000418501 FAM229BQ4G0N7 80 aa5.17□□□□□ -1.58
USP54-203ENST00000418501 SCXQ7RTU7 201 aa5.17□□□□□ -1.58
USP54-203ENST00000418501 CD164Q04900 197 aa5.17□□□□□ -1.58
USP54-203ENST00000418501 LIMD2Q9BT23 127 aa5.17□□□□□ -1.58
USP54-203ENST00000418501 SMIM29Q86T20 159 aa5.16□□□□□ -1.58
USP54-203ENST00000418501 KRTAP13-1Q8IUC0 172 aa5.16□□□□□ -1.58
USP54-203ENST00000418501 A0A1W2PNM2 257 aa5.16□□□□□ -1.58
USP54-203ENST00000418501 HUWE1Q7Z6Z7 4374 aaKnown RBP5.15□□□□□ -1.58
USP54-203ENST00000418501 PANO1I0J062 215 aa5.15□□□□□ -1.58
USP54-203ENST00000418501 KRTAP10-2P60368 255 aa5.15□□□□□ -1.58
USP54-203ENST00000418501 PRO0628Q9UI54 55 aa5.15□□□□□ -1.58
USP54-203ENST00000418501 MOBPQ13875 183 aa5.15□□□□□ -1.59
USP54-203ENST00000418501 TRAV7A0A075B6U4 112 aa5.14□□□□□ -1.59
USP54-203ENST00000418501 PLA2G1BP04054 148 aaKnown RBP5.14□□□□□ -1.59
USP54-203ENST00000418501 Q6ZSA8 131 aa5.14□□□□□ -1.59
USP54-203ENST00000418501 KRTAP10-1P60331 282 aa5.13□□□□□ -1.59
USP54-203ENST00000418501 SPINK6Q6UWN8 80 aa5.13□□□□□ -1.59
USP54-203ENST00000418501 DNAH7Q8WXX0 4024 aa5.13□□□□□ -1.59
USP54-203ENST00000418501 A0A087WVE0 104 aa5.12□□□□□ -1.59
USP54-203ENST00000418501 FAM229AH3BQW9 127 aa5.12□□□□□ -1.59
USP54-203ENST00000418501 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
USP54-203ENST00000418501 MP68P56378 58 aa5.11□□□□□ -1.59
USP54-203ENST00000418501 HCG22E2RYF7 251 aa5.1□□□□□ -1.59
USP54-203ENST00000418501 NDUFC1O43677 76 aa5.1□□□□□ -1.59
USP54-203ENST00000418501 A8MWP4 228 aa5.1□□□□□ -1.59
USP54-203ENST00000418501 KRTAP11-1Q8IUC1 163 aa5.1□□□□□ -1.59
USP54-203ENST00000418501 IGKV4-1P06312 121 aa5.09□□□□□ -1.59
USP54-203ENST00000418501 FP248Q71RG6 208 aaPredicted RBP5.09□□□□□ -1.59
USP54-203ENST00000418501 DNAH9Q9NYC9 4486 aa5.09□□□□□ -1.59
USP54-203ENST00000418501 H7BZZ5 65 aa5.09□□□□□ -1.6
USP54-203ENST00000418501 SERP1Q9Y6X1 66 aa5.09□□□□□ -1.6
USP54-203ENST00000418501 FAM30AQ9NZY2 134 aa5.08□□□□□ -1.6
USP54-203ENST00000418501 TYMSOSQ8TAI1 123 aa5.07□□□□□ -1.6
USP54-203ENST00000418501 CASC2Q6XLA1 102 aa5.07□□□□□ -1.6
USP54-203ENST00000418501 C8orf87E5RJ46 101 aa5.07□□□□□ -1.6
USP54-203ENST00000418501 FAM236DA0A1B0GTK5 79 aa5.06□□□□□ -1.6
USP54-203ENST00000418501 FAM236CP0DP71 79 aa5.06□□□□□ -1.6
USP54-203ENST00000418501 PRR15Q8IV56 129 aa5.06□□□□□ -1.6
USP54-203ENST00000418501 TP53AIP1Q9HCN2 124 aa5.06□□□□□ -1.6
USP54-203ENST00000418501 DNAH6Q9C0G6 4158 aa5.06□□□□□ -1.6
USP54-203ENST00000418501 SPINK1P00995 79 aa5.05□□□□□ -1.6
USP54-203ENST00000418501 KLKP1Q107X0 134 aa5.04□□□□□ -1.6
USP54-203ENST00000418501 H3BPC8 53 aa5.04□□□□□ -1.6
USP54-203ENST00000418501 ATP5EP56381 51 aaPredicted RBP5.04□□□□□ -1.6
USP54-203ENST00000418501 WFDC13Q8IUB5 93 aa5.03□□□□□ -1.6
USP54-203ENST00000418501 NDUFS5O43920 106 aa5.03□□□□□ -1.6
USP54-203ENST00000418501 PRKDCP78527 4128 aaKnown RBP5.02□□□□□ -1.61
USP54-203ENST00000418501 K7EQZ3 153 aa5.02□□□□□ -1.61
USP54-203ENST00000418501 ASB16-AS1Q495Z4 193 aa5.02□□□□□ -1.61
USP54-203ENST00000418501 LINC00472Q9H8W2 130 aa5.02□□□□□ -1.61
USP54-203ENST00000418501 C20orf197Q8N268 126 aa5.02□□□□□ -1.61
USP54-203ENST00000418501 Q8N9L7 120 aa5.02□□□□□ -1.61
USP54-203ENST00000418501 SMIM26A0A096LP01 95 aa5.02□□□□□ -1.61
USP54-203ENST00000418501 DSCR10P59022 87 aa5.02□□□□□ -1.61
USP54-203ENST00000418501 IGHV6-1A0A0B4J1U7 121 aa5.01□□□□□ -1.61
USP54-203ENST00000418501 A0A1B0GVX0 72 aa5.01□□□□□ -1.61
USP54-203ENST00000418501 hDV103S1A0JD37 113 aa5.01□□□□□ -1.61
USP54-203ENST00000418501 LINC00304Q8N9R0 145 aa5.01□□□□□ -1.61
USP54-203ENST00000418501 SEC61GP60059 68 aa5.01□□□□□ -1.61
USP54-203ENST00000418501 DEFB116Q30KQ4 102 aa5□□□□□ -1.61
USP54-203ENST00000418501 RPS29P62273 56 aaKnown RBP5□□□□□ -1.61
USP54-203ENST00000418501 ANAPC11Q9NYG5 84 aa5□□□□□ -1.61
USP54-203ENST00000418501 TMEM254Q8TBM7 123 aa5□□□□□ -1.61
USP54-203ENST00000418501 FBN3Q75N90 2809 aa4.99□□□□□ -1.61
USP54-203ENST00000418501 A0A1B0GVY2 172 aa4.99□□□□□ -1.61
USP54-203ENST00000418501 A0A0G2JQZ4 141 aa4.99□□□□□ -1.61
USP54-203ENST00000418501 ALMS1Q8TCU4 4167 aa4.99□□□□□ -1.61
USP54-203ENST00000418501 C8orf17Q9NRJ1 99 aa4.99□□□□□ -1.61
USP54-203ENST00000418501 MEGF8Q7Z7M0 2845 aa4.99□□□□□ -1.61
USP54-203ENST00000418501 DYNC2H1Q8NCM8 4307 aaKnown RBP4.98□□□□□ -1.61
USP54-203ENST00000418501 SMR3BP02814 79 aaPredicted RBP4.97□□□□□ -1.61
USP54-203ENST00000418501 LINC00313P59037 77 aa4.97□□□□□ -1.61
USP54-203ENST00000418501 MRPL34Q9BQ48 92 aaKnown RBP4.97□□□□□ -1.61
USP54-203ENST00000418501 V9GYY9 64 aa4.97□□□□□ -1.61
USP54-203ENST00000418501 C1orf195Q5TG92 126 aa4.96□□□□□ -1.62
USP54-203ENST00000418501 HECTD4Q9Y4D8 3996 aa4.95□□□□□ -1.62
USP54-203ENST00000418501 OCR1Q9BZK8 76 aa4.95□□□□□ -1.62
USP54-203ENST00000418501 H0Y9P7 68 aa4.94□□□□□ -1.62
USP54-203ENST00000418501 TRAV22A0A0B4J277 110 aa4.93□□□□□ -1.62
USP54-203ENST00000418501 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
USP54-203ENST00000418501 VPS13DQ5THJ4 4388 aa4.92□□□□□ -1.62
USP54-203ENST00000418501 MMP24-AS1A0A0U1RRL7 71 aa4.92□□□□□ -1.62
USP54-203ENST00000418501 BRK1Q8WUW1 75 aa4.92□□□□□ -1.62
USP54-203ENST00000418501 TENM2Q9NT68 2774 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms