RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
ECHDC1-206ENST00000417628 C20orf203Q8NBC4 194 aa3.58□□□□□ -1.84
ECHDC1-206ENST00000417628 C1orf64Q8NEQ6 169 aa3.58□□□□□ -1.84
ECHDC1-206ENST00000417628 CDC42SE2Q9NRR3 84 aa3.58□□□□□ -1.84
ECHDC1-206ENST00000417628 FAT3Q8TDW7 4589 aa3.58□□□□□ -1.84
ECHDC1-206ENST00000417628 TNXBP22105 4242 aa3.57□□□□□ -1.84
ECHDC1-206ENST00000417628 IGHV3-43A0A0B4J1X8 118 aa3.57□□□□□ -1.84
ECHDC1-206ENST00000417628 IGHV3-38A0A0C4DH36 116 aa3.57□□□□□ -1.84
ECHDC1-206ENST00000417628 PRM2P04554 102 aa3.57□□□□□ -1.84
ECHDC1-206ENST00000417628 DNAH10OSP0CZ25 163 aa3.57□□□□□ -1.84
ECHDC1-206ENST00000417628 IGHV3-43DP0DP04 118 aa3.57□□□□□ -1.84
ECHDC1-206ENST00000417628 FAM74A4Q5TZK3 123 aa3.57□□□□□ -1.84
ECHDC1-206ENST00000417628 Q6ZQT0 140 aa3.57□□□□□ -1.84
ECHDC1-206ENST00000417628 Q6ZRN7 208 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-206ENST00000417628 LINC00337Q8N6G1 96 aa3.57□□□□□ -1.84
ECHDC1-206ENST00000417628 IGKV2-40A0A087WW87 121 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 I3L2K1 104 aa3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 BPY2O14599 106 aa3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 IGKV2D-40P01614 121 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 RPL27AP46776 148 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 CCL18P55774 89 aa3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 LINC00315P59091 139 aa3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 PRR3P79522 188 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 C17orf58Q2M2W7 97 aa3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 C9orf116Q5BN46 136 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 C11orf72Q8NBR9 251 aa3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 RPL39LQ96EH5 51 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-206ENST00000417628 A0A087WTM6 91 aa3.55□□□□□ -1.84
ECHDC1-206ENST00000417628 TRAV21A0A0B4J279 112 aa3.55□□□□□ -1.84
ECHDC1-206ENST00000417628 A0A0J9YXV3 536 aa3.55□□□□□ -1.84
ECHDC1-206ENST00000417628 IGKV2-29A2NJV5 120 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-206ENST00000417628 IGLV2-23P01705 113 aa3.55□□□□□ -1.84
ECHDC1-206ENST00000417628 HTN3P15516 51 aa3.55□□□□□ -1.84
ECHDC1-206ENST00000417628 CASC2Q6XLA1 102 aa3.55□□□□□ -1.84
ECHDC1-206ENST00000417628 USMG5Q96IX5 58 aa3.55□□□□□ -1.84
ECHDC1-206ENST00000417628 CHKB-CPT1BH3BT56 60 aa3.54□□□□□ -1.84
ECHDC1-206ENST00000417628 PANO1I0J062 215 aa3.54□□□□□ -1.84
ECHDC1-206ENST00000417628 K7EQG2 157 aa3.54□□□□□ -1.84
ECHDC1-206ENST00000417628 NCR3O14931 201 aa3.54□□□□□ -1.84
ECHDC1-206ENST00000417628 IGKV1-16P04430 117 aa3.54□□□□□ -1.84
ECHDC1-206ENST00000417628 RPL39P62891 51 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-206ENST00000417628 C9orf129Q5T035 196 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-206ENST00000417628 Q8TAT8 98 aa3.54□□□□□ -1.84
ECHDC1-206ENST00000417628 RNF5Q99942 180 aa3.54□□□□□ -1.84
ECHDC1-206ENST00000417628 Q9HAA7 133 aa3.54□□□□□ -1.84
ECHDC1-206ENST00000417628 KLK9Q9UKQ9 250 aa3.54□□□□□ -1.84
ECHDC1-206ENST00000417628 TRBV10-1A0A0K0K1A3 114 aa3.53□□□□□ -1.84
ECHDC1-206ENST00000417628 H3BPC8 53 aa3.53□□□□□ -1.84
ECHDC1-206ENST00000417628 LECT2O14960 151 aa3.53□□□□□ -1.84
ECHDC1-206ENST00000417628 SPART-AS1P0CW21 52 aa3.53□□□□□ -1.84
ECHDC1-206ENST00000417628 Q6ZSA8 131 aa3.53□□□□□ -1.84
ECHDC1-206ENST00000417628 SCXQ7RTU7 201 aa3.53□□□□□ -1.84
ECHDC1-206ENST00000417628 NPBQ8NG41 125 aa3.53□□□□□ -1.84
ECHDC1-206ENST00000417628 K7EIM0 57 aa3.52□□□□□ -1.85
ECHDC1-206ENST00000417628 KLK9Q2XQG4 91 aa3.52□□□□□ -1.85
ECHDC1-206ENST00000417628 SMIM11BQ8TCY0 68 aa3.52□□□□□ -1.85
ECHDC1-206ENST00000417628 PLAC8Q9NZF1 115 aa3.52□□□□□ -1.85
ECHDC1-206ENST00000417628 IGLV7-46A0A075B6I9 117 aa3.51□□□□□ -1.85
ECHDC1-206ENST00000417628 IGHV1OR15-1A0A075B7D0 117 aa3.51□□□□□ -1.85
ECHDC1-206ENST00000417628 IGHV6-1A0A0B4J1U7 121 aa3.51□□□□□ -1.85
ECHDC1-206ENST00000417628 IGKV3-20P01619 116 aa3.51□□□□□ -1.85
ECHDC1-206ENST00000417628 MGPP08493 103 aa3.51□□□□□ -1.85
ECHDC1-206ENST00000417628 RPL37AP61513 92 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-206ENST00000417628 MOBPQ13875 183 aa3.51□□□□□ -1.85
ECHDC1-206ENST00000417628 SPTSSBQ8NFR3 76 aa3.51□□□□□ -1.85
ECHDC1-206ENST00000417628 A6NED7 52 aa3.5□□□□□ -1.85
ECHDC1-206ENST00000417628 CMC4P56277 68 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-206ENST00000417628 C6orf99Q4VX62 202 aa3.5□□□□□ -1.85
ECHDC1-206ENST00000417628 NTM-AS1Q6ZSK4 140 aa3.5□□□□□ -1.85
ECHDC1-206ENST00000417628 Q8NBF4 154 aa3.5□□□□□ -1.85
ECHDC1-206ENST00000417628 LINC00467Q9BRT7 94 aa3.5□□□□□ -1.85
ECHDC1-206ENST00000417628 XAGE1AQ9HD64 81 aa3.5□□□□□ -1.85
ECHDC1-206ENST00000417628 IGKV2-28A0A075B6P5 120 aa3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 IGHV3-64A0A075B6Q5 118 aa3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 M0QY20 66 aa3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 IGKV2D-28P01615 120 aa3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 IGKV4-1P06312 121 aa3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 GIG44P09565 113 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 RNASE3P12724 160 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 C10orf55Q5SWW7 151 aa3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 Q8N814 137 aa3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 FAM104AQ969W3 186 aa3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 PRR15LQ9BU68 103 aa3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 LINC01558Q9Y6Z2 57 aa3.49□□□□□ -1.85
ECHDC1-206ENST00000417628 IGHV3-49A0A0A0MS15 119 aa3.48□□□□□ -1.85
ECHDC1-206ENST00000417628 TRBV6-4A0A1B0GX49 114 aa3.48□□□□□ -1.85
ECHDC1-206ENST00000417628 CNBPP62633 177 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-206ENST00000417628 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.48□□□□□ -1.85
ECHDC1-206ENST00000417628 ZFAND2AQ8N6M9 145 aa3.48□□□□□ -1.85
ECHDC1-206ENST00000417628 LINC00208Q96KT6 92 aa3.48□□□□□ -1.85
ECHDC1-206ENST00000417628 KCNQ1DNQ9H478 68 aa3.48□□□□□ -1.85
ECHDC1-206ENST00000417628 SND1-IT1Q9HBX3 110 aa3.48□□□□□ -1.85
ECHDC1-206ENST00000417628 IGLV11-55A0A075B6I3 123 aa3.47□□□□□ -1.85
ECHDC1-206ENST00000417628 HIGD2AQ9BW72 106 aa3.47□□□□□ -1.85
ECHDC1-206ENST00000417628 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-206ENST00000417628 IGHV3-73A0A0B4J1V6 119 aa3.46□□□□□ -1.86
ECHDC1-206ENST00000417628 IGHV3-16A0A0C4DH30 117 aa3.46□□□□□ -1.86
ECHDC1-206ENST00000417628 ETDCA0A1B0GVM5 59 aa3.46□□□□□ -1.86
ECHDC1-206ENST00000417628 A8MU10 97 aa3.46□□□□□ -1.86
ECHDC1-206ENST00000417628 IGHV3-48P01763 117 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms