RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 BRK1Q8WUW1 75 aa9.97□□□□□ -0.81
HOXD3-202ENST00000410016 DNAH7Q8WXX0 4024 aa9.97□□□□□ -0.81
HOXD3-202ENST00000410016 A0A0G2JQZ4 141 aa9.96□□□□□ -0.81
HOXD3-202ENST00000410016 CSMD3Q7Z407 3707 aa9.96□□□□□ -0.82
HOXD3-202ENST00000410016 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.95□□□□□ -0.82
HOXD3-202ENST00000410016 IGFL1Q6UW32 110 aa9.95□□□□□ -0.82
HOXD3-202ENST00000410016 KRTAP11-1Q8IUC1 163 aa9.95□□□□□ -0.82
HOXD3-202ENST00000410016 TENM2Q9NT68 2774 aa9.95□□□□□ -0.82
HOXD3-202ENST00000410016 A0A0U1RQV1 116 aa9.94□□□□□ -0.82
HOXD3-202ENST00000410016 UBE2DNLQ8IWF7 75 aa9.94□□□□□ -0.82
HOXD3-202ENST00000410016 IGLV8-61A0A075B6I0 122 aa9.94□□□□□ -0.82
HOXD3-202ENST00000410016 CHTF8P0CG12 524 aa9.93□□□□□ -0.82
HOXD3-202ENST00000410016 PMAIP1Q13794 54 aa9.93□□□□□ -0.82
HOXD3-202ENST00000410016 HIGD2AQ9BW72 106 aa9.93□□□□□ -0.82
HOXD3-202ENST00000410016 K7EQZ3 153 aa9.92□□□□□ -0.82
HOXD3-202ENST00000410016 C14orf177Q52M58 125 aa9.92□□□□□ -0.82
HOXD3-202ENST00000410016 PHF5AQ7RTV0 110 aaKnown RBP9.92□□□□□ -0.82
HOXD3-202ENST00000410016 PLECQ15149 4684 aaKnown RBP9.91□□□□□ -0.82
HOXD3-202ENST00000410016 SRRM2Q9UQ35 2752 aaKnown RBP9.91□□□□□ -0.82
HOXD3-202ENST00000410016 LRCOL1A6NCL2 159 aa9.89□□□□□ -0.83
HOXD3-202ENST00000410016 PRR15Q8IV56 129 aa9.89□□□□□ -0.83
HOXD3-202ENST00000410016 LCE6AA0A183 80 aa9.89□□□□□ -0.83
HOXD3-202ENST00000410016 C9orf163Q8N9P6 203 aa9.89□□□□□ -0.83
HOXD3-202ENST00000410016 FAM30AQ9NZY2 134 aa9.89□□□□□ -0.83
HOXD3-202ENST00000410016 CD164Q04900 197 aa9.88□□□□□ -0.83
HOXD3-202ENST00000410016 H0Y9J4 135 aa9.88□□□□□ -0.83
HOXD3-202ENST00000410016 B9D2Q9BPU9 175 aa9.86□□□□□ -0.83
HOXD3-202ENST00000410016 SPRR1BP22528 89 aa9.86□□□□□ -0.83
HOXD3-202ENST00000410016 A0A087WSZ3 146 aa9.85□□□□□ -0.83
HOXD3-202ENST00000410016 UBE2AP49459 152 aa9.85□□□□□ -0.83
HOXD3-202ENST00000410016 NBDYA0A0U1RRE5 68 aa9.84□□□□□ -0.83
HOXD3-202ENST00000410016 DEFB116Q30KQ4 102 aa9.84□□□□□ -0.83
HOXD3-202ENST00000410016 Q6ZRN7 208 aaPredicted RBP9.84□□□□□ -0.83
HOXD3-202ENST00000410016 HCG22E2RYF7 251 aa9.82□□□□□ -0.84
HOXD3-202ENST00000410016 PANO1I0J062 215 aa9.82□□□□□ -0.84
HOXD3-202ENST00000410016 MDFIQ99750 246 aa9.81□□□□□ -0.84
HOXD3-202ENST00000410016 LINC00474Q9P2X8 69 aa9.81□□□□□ -0.84
HOXD3-202ENST00000410016 ZCCHC13Q8WW36 166 aaKnown RBP9.79□□□□□ -0.84
HOXD3-202ENST00000410016 KRTAP13-1Q8IUC0 172 aa9.78□□□□□ -0.84
HOXD3-202ENST00000410016 NUPR2A6NF83 97 aa9.76□□□□□ -0.85
HOXD3-202ENST00000410016 RPL37AP61513 92 aaKnown RBP9.76□□□□□ -0.85
HOXD3-202ENST00000410016 VPS13DQ5THJ4 4388 aa9.75□□□□□ -0.85
HOXD3-202ENST00000410016 STARD9Q9P2P6 4700 aa9.74□□□□□ -0.85
HOXD3-202ENST00000410016 KRTAP29-1A8MX34 341 aaPredicted RBP9.74□□□□□ -0.85
HOXD3-202ENST00000410016 LINC00472Q9H8W2 130 aa9.74□□□□□ -0.85
HOXD3-202ENST00000410016 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.73□□□□□ -0.85
HOXD3-202ENST00000410016 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
HOXD3-202ENST00000410016 SPACA4Q8TDM5 124 aa9.72□□□□□ -0.85
HOXD3-202ENST00000410016 FAM229BQ4G0N7 80 aa9.71□□□□□ -0.85
HOXD3-202ENST00000410016 A8MWP4 228 aa9.68□□□□□ -0.86
HOXD3-202ENST00000410016 PRKDCP78527 4128 aaKnown RBP9.68□□□□□ -0.86
HOXD3-202ENST00000410016 HECTD4Q9Y4D8 3996 aa9.67□□□□□ -0.86
HOXD3-202ENST00000410016 A0A087WTM6 91 aa9.67□□□□□ -0.86
HOXD3-202ENST00000410016 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.86
HOXD3-202ENST00000410016 KMT2AQ03164 3969 aa9.65□□□□□ -0.86
HOXD3-202ENST00000410016 Q1T7F1 81 aa9.65□□□□□ -0.87
HOXD3-202ENST00000410016 CASC2Q6XLA1 102 aa9.65□□□□□ -0.87
HOXD3-202ENST00000410016 DNAH2Q9P225 4427 aa9.63□□□□□ -0.87
HOXD3-202ENST00000410016 hDV103S1A0JD37 113 aa9.63□□□□□ -0.87
HOXD3-202ENST00000410016 LINC00483Q53H64 154 aa9.63□□□□□ -0.87
HOXD3-202ENST00000410016 MP68P56378 58 aa9.61□□□□□ -0.87
HOXD3-202ENST00000410016 IGLV9-49A0A0B4J1Y8 123 aa9.6□□□□□ -0.87
HOXD3-202ENST00000410016 C1orf64Q8NEQ6 169 aa9.6□□□□□ -0.87
HOXD3-202ENST00000410016 FRAS1Q86XX4 4008 aa9.6□□□□□ -0.87
HOXD3-202ENST00000410016 Q96NJ1 140 aa9.6□□□□□ -0.87
HOXD3-202ENST00000410016 DNAH8Q96JB1 4490 aa9.59□□□□□ -0.87
HOXD3-202ENST00000410016 TRAV22A0A0B4J277 110 aa9.59□□□□□ -0.87
HOXD3-202ENST00000410016 Q6ZR54 194 aa9.59□□□□□ -0.87
HOXD3-202ENST00000410016 LINC00208Q96KT6 92 aa9.59□□□□□ -0.87
HOXD3-202ENST00000410016 CYP4F30PQ9H0H9 118 aa9.59□□□□□ -0.87
HOXD3-202ENST00000410016 RTL8CO15255 209 aa9.58□□□□□ -0.88
HOXD3-202ENST00000410016 NDUFB1O75438 58 aa9.58□□□□□ -0.88
HOXD3-202ENST00000410016 PSORS1C2Q9UIG4 136 aa9.58□□□□□ -0.88
HOXD3-202ENST00000410016 DNAH17Q9UFH2 4485 aa9.58□□□□□ -0.88
HOXD3-202ENST00000410016 MMP24-AS1A0A0U1RRL7 71 aa9.58□□□□□ -0.88
HOXD3-202ENST00000410016 IGLV5-52A0A0A0MRZ9 124 aa9.57□□□□□ -0.88
HOXD3-202ENST00000410016 WWC2-AS2Q96NR7 200 aa9.56□□□□□ -0.88
HOXD3-202ENST00000410016 PLAC8Q9NZF1 115 aa9.56□□□□□ -0.88
HOXD3-202ENST00000410016 H0Y9P7 68 aa9.56□□□□□ -0.88
HOXD3-202ENST00000410016 C4orf48Q5BLP8 95 aa9.55□□□□□ -0.88
HOXD3-202ENST00000410016 MOBPQ13875 183 aa9.55□□□□□ -0.88
HOXD3-202ENST00000410016 PRR4Q16378 134 aa9.55□□□□□ -0.88
HOXD3-202ENST00000410016 H3BPC8 53 aa9.54□□□□□ -0.88
HOXD3-202ENST00000410016 MEGF8Q7Z7M0 2845 aa9.54□□□□□ -0.88
HOXD3-202ENST00000410016 ASB16-AS1Q495Z4 193 aa9.53□□□□□ -0.88
HOXD3-202ENST00000410016 KTN1-AS1Q86SY8 53 aa9.53□□□□□ -0.88
HOXD3-202ENST00000410016 ZNF706Q9Y5V0 76 aaPredicted RBP9.52□□□□□ -0.88
HOXD3-202ENST00000410016 ZNF861PO60384 105 aa9.52□□□□□ -0.89
HOXD3-202ENST00000410016 FBN3Q75N90 2809 aa9.51□□□□□ -0.89
HOXD3-202ENST00000410016 ANAPC11Q9NYG5 84 aa9.51□□□□□ -0.89
HOXD3-202ENST00000410016 TGP01266 2768 aa9.49□□□□□ -0.89
HOXD3-202ENST00000410016 RBM12B-AS1Q9P1G2 102 aa9.49□□□□□ -0.89
HOXD3-202ENST00000410016 SPANXA2-OT1Q8N9U9 137 aa9.48□□□□□ -0.89
HOXD3-202ENST00000410016 NDUFS5O43920 106 aa9.46□□□□□ -0.89
HOXD3-202ENST00000410016 C8orf17Q9NRJ1 99 aa9.46□□□□□ -0.9
HOXD3-202ENST00000410016 C1orf134Q5TEV5 83 aa9.44□□□□□ -0.9
HOXD3-202ENST00000410016 DNHD1Q96M86 4753 aa9.44□□□□□ -0.9
HOXD3-202ENST00000410016 A0A1B0GVX0 72 aa9.43□□□□□ -0.9
HOXD3-202ENST00000410016 TP53AIP1Q9HCN2 124 aa9.42□□□□□ -0.9
HOXD3-202ENST00000410016 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms