RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ZNF861PO60384 105 aa7.6□□□□□ -1.19
CHMP3-204ENST00000409727 XGP55808 180 aa7.6□□□□□ -1.19
CHMP3-204ENST00000409727 RBM3P98179 157 aaKnown RBP7.6□□□□□ -1.19
CHMP3-204ENST00000409727 SMR3BP02814 79 aaPredicted RBP7.58□□□□□ -1.2
CHMP3-204ENST00000409727 SRRM2Q9UQ35 2752 aaKnown RBP7.56□□□□□ -1.2
CHMP3-204ENST00000409727 DSCR8Q96T75 97 aa7.56□□□□□ -1.2
CHMP3-204ENST00000409727 SMIM29Q86T20 159 aa7.55□□□□□ -1.2
CHMP3-204ENST00000409727 LRP1BQ9NZR2 4599 aa7.55□□□□□ -1.2
CHMP3-204ENST00000409727 SPRR4Q96PI1 79 aa7.54□□□□□ -1.2
CHMP3-204ENST00000409727 VPS25Q9BRG1 176 aa7.54□□□□□ -1.2
CHMP3-204ENST00000409727 F8WEM9 126 aa7.53□□□□□ -1.2
CHMP3-204ENST00000409727 ANAPC11Q9NYG5 84 aa7.53□□□□□ -1.2
CHMP3-204ENST00000409727 RPL37AP61513 92 aaKnown RBP7.53□□□□□ -1.2
CHMP3-204ENST00000409727 DYNC1H1Q14204 4646 aaKnown RBP7.52□□□□□ -1.21
CHMP3-204ENST00000409727 Q6ZQT0 140 aa7.52□□□□□ -1.21
CHMP3-204ENST00000409727 ZNF706Q9Y5V0 76 aaPredicted RBP7.52□□□□□ -1.21
CHMP3-204ENST00000409727 A0A0G2JQZ4 141 aa7.51□□□□□ -1.21
CHMP3-204ENST00000409727 CCKP06307 115 aa7.51□□□□□ -1.21
CHMP3-204ENST00000409727 LOC110117498A0A087WWA1 95 aa7.51□□□□□ -1.21
CHMP3-204ENST00000409727 TRBV7-4A0A0J9YYF1 115 aa7.51□□□□□ -1.21
CHMP3-204ENST00000409727 SPRR1BP22528 89 aa7.51□□□□□ -1.21
CHMP3-204ENST00000409727 IGLV9-49A0A0B4J1Y8 123 aa7.5□□□□□ -1.21
CHMP3-204ENST00000409727 LINC00483Q53H64 154 aa7.48□□□□□ -1.21
CHMP3-204ENST00000409727 C9orf153Q5TBE3 101 aa7.48□□□□□ -1.21
CHMP3-204ENST00000409727 FAM240AA0A1B0GVK7 77 aa7.47□□□□□ -1.21
CHMP3-204ENST00000409727 PDE6GP18545 87 aa7.47□□□□□ -1.21
CHMP3-204ENST00000409727 CDIP1Q9H305 208 aa7.47□□□□□ -1.21
CHMP3-204ENST00000409727 IGFL1Q6UW32 110 aa7.46□□□□□ -1.22
CHMP3-204ENST00000409727 ACYP1P07311 99 aa7.45□□□□□ -1.22
CHMP3-204ENST00000409727 LINC00846Q9NV44 126 aa7.45□□□□□ -1.22
CHMP3-204ENST00000409727 A0A1W2PNM2 257 aa7.44□□□□□ -1.22
CHMP3-204ENST00000409727 MOBPQ13875 183 aa7.44□□□□□ -1.22
CHMP3-204ENST00000409727 IGLV8-61A0A075B6I0 122 aa7.43□□□□□ -1.22
CHMP3-204ENST00000409727 VPS13BQ7Z7G8 4022 aa7.43□□□□□ -1.22
CHMP3-204ENST00000409727 APOBP04114 4563 aaKnown RBP7.43□□□□□ -1.22
CHMP3-204ENST00000409727 CDK2AP2O75956 126 aa7.42□□□□□ -1.22
CHMP3-204ENST00000409727 Q8NBF4 154 aa7.41□□□□□ -1.22
CHMP3-204ENST00000409727 KRTAP10-4P60372 401 aaPredicted RBP7.41□□□□□ -1.22
CHMP3-204ENST00000409727 Q6JHZ5 121 aa7.41□□□□□ -1.22
CHMP3-204ENST00000409727 SPINK6Q6UWN8 80 aa7.41□□□□□ -1.22
CHMP3-204ENST00000409727 HRCT1Q6UXD1 115 aa7.4□□□□□ -1.23
CHMP3-204ENST00000409727 A0A087X002 238 aa7.39□□□□□ -1.23
CHMP3-204ENST00000409727 KRTAP1-4P0C5Y4 121 aa7.38□□□□□ -1.23
CHMP3-204ENST00000409727 MT-ATP8P03928 68 aa7.38□□□□□ -1.23
CHMP3-204ENST00000409727 PLA2G1BP04054 148 aaKnown RBP7.38□□□□□ -1.23
CHMP3-204ENST00000409727 UBL5Q9BZL1 73 aa7.38□□□□□ -1.23
CHMP3-204ENST00000409727 Q5VSD8 79 aa7.37□□□□□ -1.23
CHMP3-204ENST00000409727 A0A087WSZ3 146 aa7.36□□□□□ -1.23
CHMP3-204ENST00000409727 CRYGAP11844 174 aa7.36□□□□□ -1.23
CHMP3-204ENST00000409727 KRTAP13-2Q52LG2 175 aa7.36□□□□□ -1.23
CHMP3-204ENST00000409727 Q6ZVQ6 151 aa7.36□□□□□ -1.23
CHMP3-204ENST00000409727 EPPK1P58107 5090 aaKnown RBP7.35□□□□□ -1.23
CHMP3-204ENST00000409727 FAM229BQ4G0N7 80 aa7.34□□□□□ -1.23
CHMP3-204ENST00000409727 LINC00643Q86TS7 51 aa7.34□□□□□ -1.23
CHMP3-204ENST00000409727 SIGMAR1Q99720 223 aa7.34□□□□□ -1.23
CHMP3-204ENST00000409727 IGKV3D-7A0A0C4DH55 119 aa7.34□□□□□ -1.23
CHMP3-204ENST00000409727 NREPQ16612 68 aa7.34□□□□□ -1.23
CHMP3-204ENST00000409727 FAT1Q14517 4588 aa7.34□□□□□ -1.24
CHMP3-204ENST00000409727 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
CHMP3-204ENST00000409727 A0A1B0GW54 56 aa7.31□□□□□ -1.24
CHMP3-204ENST00000409727 Q6Q795 121 aa7.31□□□□□ -1.24
CHMP3-204ENST00000409727 PRR26Q8N8Z3 221 aa7.31□□□□□ -1.24
CHMP3-204ENST00000409727 TRBV7-7A0A0K0K1E9 115 aa7.3□□□□□ -1.24
CHMP3-204ENST00000409727 SSBP3-AS1Q7Z2R9 100 aa7.3□□□□□ -1.24
CHMP3-204ENST00000409727 TYMSOSQ8TAI1 123 aa7.3□□□□□ -1.24
CHMP3-204ENST00000409727 DEFB116Q30KQ4 102 aa7.29□□□□□ -1.24
CHMP3-204ENST00000409727 HSPG2P98160 4391 aa7.29□□□□□ -1.24
CHMP3-204ENST00000409727 LOC100996750A0A140TA64 210 aa7.27□□□□□ -1.25
CHMP3-204ENST00000409727 Q8N1X5 172 aa7.27□□□□□ -1.25
CHMP3-204ENST00000409727 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
CHMP3-204ENST00000409727 KIAA1109Q2LD37 5005 aa7.27□□□□□ -1.25
CHMP3-204ENST00000409727 RYR1P21817 5038 aa7.27□□□□□ -1.25
CHMP3-204ENST00000409727 BPY2O14599 106 aa7.26□□□□□ -1.25
CHMP3-204ENST00000409727 HIST1H4AP62805 103 aaKnown RBP7.26□□□□□ -1.25
CHMP3-204ENST00000409727 ATP5EP2Q5VTU8 51 aa7.25□□□□□ -1.25
CHMP3-204ENST00000409727 Q8N9L7 120 aa7.24□□□□□ -1.25
CHMP3-204ENST00000409727 CXCL6P80162 114 aa7.23□□□□□ -1.25
CHMP3-204ENST00000409727 A0A087WVE0 104 aa7.22□□□□□ -1.25
CHMP3-204ENST00000409727 CD164Q04900 197 aa7.22□□□□□ -1.25
CHMP3-204ENST00000409727 SS18L2Q9UHA2 77 aa7.21□□□□□ -1.25
CHMP3-204ENST00000409727 LINC00304Q8N9R0 145 aa7.2□□□□□ -1.26
CHMP3-204ENST00000409727 LINC00472Q9H8W2 130 aa7.2□□□□□ -1.26
CHMP3-204ENST00000409727 DSCR10P59022 87 aa7.19□□□□□ -1.26
CHMP3-204ENST00000409727 Q96NJ1 140 aa7.19□□□□□ -1.26
CHMP3-204ENST00000409727 IMUPQ9GZP8 106 aa7.19□□□□□ -1.26
CHMP3-204ENST00000409727 K7EQZ3 153 aa7.17□□□□□ -1.26
CHMP3-204ENST00000409727 IGKV4-1P06312 121 aa7.17□□□□□ -1.26
CHMP3-204ENST00000409727 KRTAP4-5Q9BYR2 181 aa7.16□□□□□ -1.26
CHMP3-204ENST00000409727 SPINK1P00995 79 aa7.15□□□□□ -1.26
CHMP3-204ENST00000409727 XP32Q5T750 250 aa7.15□□□□□ -1.26
CHMP3-204ENST00000409727 FAM236AA0A1B0GUQ0 79 aa7.15□□□□□ -1.27
CHMP3-204ENST00000409727 FAM236BA0A1B0GV22 79 aa7.15□□□□□ -1.27
CHMP3-204ENST00000409727 LIMD2Q9BT23 127 aa7.15□□□□□ -1.27
CHMP3-204ENST00000409727 FLG2Q5D862 2391 aaPredicted RBP7.14□□□□□ -1.27
CHMP3-204ENST00000409727 J3KT08 172 aa7.13□□□□□ -1.27
CHMP3-204ENST00000409727 SPAG11AQ6PDA7 123 aa7.13□□□□□ -1.27
CHMP3-204ENST00000409727 A8MWP4 228 aa7.12□□□□□ -1.27
CHMP3-204ENST00000409727 PKHD1L1Q86WI1 4243 aa7.11□□□□□ -1.27
CHMP3-204ENST00000409727 C1orf195Q5TG92 126 aa7.11□□□□□ -1.27
CHMP3-204ENST00000409727 SCGB1A1P11684 91 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms