RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 RPL37AP8A6NKH3 93 aa7.27□□□□□ -1.25
CHRNA1-203ENST00000409219 TRACP01848 142 aa7.27□□□□□ -1.25
CHRNA1-203ENST00000409219 UBE2AP49459 152 aa7.26□□□□□ -1.25
CHRNA1-203ENST00000409219 SEC61BP60468 96 aaKnown RBP7.26□□□□□ -1.25
CHRNA1-203ENST00000409219 MT1HP80294 61 aa7.26□□□□□ -1.25
CHRNA1-203ENST00000409219 LINC00167Q96N53 147 aa7.26□□□□□ -1.25
CHRNA1-203ENST00000409219 KRTAP19-2Q3LHN2 52 aa7.25□□□□□ -1.25
CHRNA1-203ENST00000409219 C3orf22Q8N5N4 141 aa7.25□□□□□ -1.25
CHRNA1-203ENST00000409219 SMIM11BQ8TCY0 68 aa7.25□□□□□ -1.25
CHRNA1-203ENST00000409219 H0YGX0 51 aa7.24□□□□□ -1.25
CHRNA1-203ENST00000409219 LORP23490 312 aaPredicted RBP7.23□□□□□ -1.25
CHRNA1-203ENST00000409219 FAM218AQ96MZ4 157 aa7.22□□□□□ -1.25
CHRNA1-203ENST00000409219 TMEM126AQ9H061 195 aa7.22□□□□□ -1.25
CHRNA1-203ENST00000409219 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
CHRNA1-203ENST00000409219 PRLHP81277 87 aa7.21□□□□□ -1.26
CHRNA1-203ENST00000409219 OR13C6PQ8NH95 151 aa7.21□□□□□ -1.26
CHRNA1-203ENST00000409219 SPAG11AQ6PDA7 123 aa7.2□□□□□ -1.26
CHRNA1-203ENST00000409219 KRTAP10-6P60371 365 aaPredicted RBP7.19□□□□□ -1.26
CHRNA1-203ENST00000409219 A0A1B0GX51 115 aa7.18□□□□□ -1.26
CHRNA1-203ENST00000409219 Q8NDZ9 215 aa7.18□□□□□ -1.26
CHRNA1-203ENST00000409219 IGLV5-37A0A075B6J1 123 aa7.17□□□□□ -1.26
CHRNA1-203ENST00000409219 TEX49A0A1B0GTD5 131 aa7.17□□□□□ -1.26
CHRNA1-203ENST00000409219 IGLV6-57P01721 117 aa7.17□□□□□ -1.26
CHRNA1-203ENST00000409219 BAALC-AS2P0C853 105 aa7.17□□□□□ -1.26
CHRNA1-203ENST00000409219 NCR3O14931 201 aa7.15□□□□□ -1.27
CHRNA1-203ENST00000409219 DNAL4O96015 105 aa7.15□□□□□ -1.27
CHRNA1-203ENST00000409219 S100A7L2Q5SY68 101 aa7.15□□□□□ -1.27
CHRNA1-203ENST00000409219 FAM19A1Q7Z5A9 133 aa7.15□□□□□ -1.27
CHRNA1-203ENST00000409219 NKAPP1Q8N9T2 125 aa7.15□□□□□ -1.27
CHRNA1-203ENST00000409219 XP32Q5T750 250 aa7.14□□□□□ -1.27
CHRNA1-203ENST00000409219 SIGMAR1Q99720 223 aa7.14□□□□□ -1.27
CHRNA1-203ENST00000409219 FAM240AA0A1B0GVK7 77 aa7.13□□□□□ -1.27
CHRNA1-203ENST00000409219 VPREB1P12018 145 aa7.13□□□□□ -1.27
CHRNA1-203ENST00000409219 C4orf48Q5BLP8 95 aa7.13□□□□□ -1.27
CHRNA1-203ENST00000409219 C6orf99Q4VX62 202 aa7.11□□□□□ -1.27
CHRNA1-203ENST00000409219 Q8NBF4 154 aa7.11□□□□□ -1.27
CHRNA1-203ENST00000409219 M0R378 163 aa7.11□□□□□ -1.27
CHRNA1-203ENST00000409219 OBSCN-AS1Q96MR7 158 aa7.11□□□□□ -1.27
CHRNA1-203ENST00000409219 ORMDL1Q9P0S3 153 aa7.11□□□□□ -1.27
CHRNA1-203ENST00000409219 FLGP20930 4061 aaPredicted RBP7.1□□□□□ -1.27
CHRNA1-203ENST00000409219 TRBV7-6A0A0J9YX20 115 aa7.1□□□□□ -1.27
CHRNA1-203ENST00000409219 TRBV10-3A0A0K0K1G6 114 aa7.1□□□□□ -1.27
CHRNA1-203ENST00000409219 SNCGO76070 127 aa7.1□□□□□ -1.27
CHRNA1-203ENST00000409219 SCGB1A1P11684 91 aa7.1□□□□□ -1.27
CHRNA1-203ENST00000409219 LINC00575Q6W349 94 aa7.1□□□□□ -1.27
CHRNA1-203ENST00000409219 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
CHRNA1-203ENST00000409219 SPINK1P00995 79 aa7.09□□□□□ -1.27
CHRNA1-203ENST00000409219 ACYP1P07311 99 aa7.09□□□□□ -1.27
CHRNA1-203ENST00000409219 PCP4P48539 62 aa7.09□□□□□ -1.27
CHRNA1-203ENST00000409219 HIGD2AQ9BW72 106 aa7.09□□□□□ -1.27
CHRNA1-203ENST00000409219 TRAV23DV6A0A075B6W5 121 aa7.08□□□□□ -1.28
CHRNA1-203ENST00000409219 H3BQ85 93 aa7.06□□□□□ -1.28
CHRNA1-203ENST00000409219 ZNF73O43830 326 aaPredicted RBP7.06□□□□□ -1.28
CHRNA1-203ENST00000409219 Q8N377 158 aa7.06□□□□□ -1.28
CHRNA1-203ENST00000409219 hADV29S1A0JD25 119 aa7.05□□□□□ -1.28
CHRNA1-203ENST00000409219 TMEM256-PLSCR3K7ERE1 68 aa7.05□□□□□ -1.28
CHRNA1-203ENST00000409219 MT-ATP8P03928 68 aa7.04□□□□□ -1.28
CHRNA1-203ENST00000409219 ELOF1P60002 83 aaKnown RBP7.04□□□□□ -1.28
CHRNA1-203ENST00000409219 IGLV8-61A0A075B6I0 122 aa7.04□□□□□ -1.28
CHRNA1-203ENST00000409219 M0R2T5 61 aa7.04□□□□□ -1.28
CHRNA1-203ENST00000409219 COX7BP24311 80 aa7.04□□□□□ -1.28
CHRNA1-203ENST00000409219 JMJD7-PLA2G4BH0Y9G9 81 aa7.03□□□□□ -1.28
CHRNA1-203ENST00000409219 RPS29P62273 56 aaKnown RBP7.03□□□□□ -1.28
CHRNA1-203ENST00000409219 PCOTHQ58A44 107 aa7.03□□□□□ -1.28
CHRNA1-203ENST00000409219 KCNQ1DNQ9H478 68 aa7.03□□□□□ -1.28
CHRNA1-203ENST00000409219 ZNF706Q9Y5V0 76 aaPredicted RBP7.02□□□□□ -1.29
CHRNA1-203ENST00000409219 GHRHP01286 108 aa7.01□□□□□ -1.29
CHRNA1-203ENST00000409219 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.01□□□□□ -1.29
CHRNA1-203ENST00000409219 C14orf132Q9NPU4 83 aa7□□□□□ -1.29
CHRNA1-203ENST00000409219 SSPOA2VEC9 5147 aa7□□□□□ -1.29
CHRNA1-203ENST00000409219 Q6Q795 121 aa6.99□□□□□ -1.29
CHRNA1-203ENST00000409219 PRYO14603 147 aa6.98□□□□□ -1.29
CHRNA1-203ENST00000409219 Q6ZQY7 126 aa6.98□□□□□ -1.29
CHRNA1-203ENST00000409219 GAGE2AQ6NT46 116 aa6.98□□□□□ -1.29
CHRNA1-203ENST00000409219 CCKP06307 115 aa6.97□□□□□ -1.29
CHRNA1-203ENST00000409219 SPRR1AP35321 89 aa6.97□□□□□ -1.29
CHRNA1-203ENST00000409219 MOBPQ13875 183 aa6.97□□□□□ -1.29
CHRNA1-203ENST00000409219 LINC00643Q86TS7 51 aa6.97□□□□□ -1.29
CHRNA1-203ENST00000409219 TRBV7-7A0A0K0K1E9 115 aa6.96□□□□□ -1.3
CHRNA1-203ENST00000409219 KRTAP4-16G5E9R7 235 aaPredicted RBP6.96□□□□□ -1.3
CHRNA1-203ENST00000409219 LINC00483Q53H64 154 aa6.96□□□□□ -1.3
CHRNA1-203ENST00000409219 SMCR5Q8TEV8 140 aa6.96□□□□□ -1.3
CHRNA1-203ENST00000409219 LOC110117498A0A087WWA1 95 aa6.95□□□□□ -1.3
CHRNA1-203ENST00000409219 C21orf62-AS1Q17RA5 79 aa6.95□□□□□ -1.3
CHRNA1-203ENST00000409219 USH2AO75445 5202 aa6.95□□□□□ -1.3
CHRNA1-203ENST00000409219 IGLV9-49A0A0B4J1Y8 123 aa6.94□□□□□ -1.3
CHRNA1-203ENST00000409219 RBM3P98179 157 aaKnown RBP6.94□□□□□ -1.3
CHRNA1-203ENST00000409219 IMUPQ9GZP8 106 aa6.94□□□□□ -1.3
CHRNA1-203ENST00000409219 PDE6GP18545 87 aa6.93□□□□□ -1.3
CHRNA1-203ENST00000409219 Q6ZRX8 168 aa6.93□□□□□ -1.3
CHRNA1-203ENST00000409219 DHRS4-AS1Q9P1J3 65 aa6.93□□□□□ -1.3
CHRNA1-203ENST00000409219 B5MCH6 92 aa6.92□□□□□ -1.3
CHRNA1-203ENST00000409219 LAMTOR3Q9UHA4 124 aa6.92□□□□□ -1.3
CHRNA1-203ENST00000409219 COX6B2Q6YFQ2 88 aa6.92□□□□□ -1.3
CHRNA1-203ENST00000409219 Q6ZQT0 140 aa6.92□□□□□ -1.3
CHRNA1-203ENST00000409219 SSBP3-AS1Q7Z2R9 100 aa6.92□□□□□ -1.3
CHRNA1-203ENST00000409219 LINC00846Q9NV44 126 aa6.92□□□□□ -1.3
CHRNA1-203ENST00000409219 TRBV7-4A0A0J9YYF1 115 aa6.9□□□□□ -1.31
CHRNA1-203ENST00000409219 ETDCA0A1B0GVM5 59 aa6.9□□□□□ -1.31
CHRNA1-203ENST00000409219 C9orf92A6NGG3 77 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms