RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 DNAH7Q8WXX0 4024 aa12.57□□□□□ -0.4
CCDC47-202ENST00000403162 LINC00476Q8WZB0 136 aa12.56□□□□□ -0.4
CCDC47-202ENST00000403162 WWC2-AS2Q96NR7 200 aa12.56□□□□□ -0.4
CCDC47-202ENST00000403162 DYNC2H1Q8NCM8 4307 aaKnown RBP12.54□□□□□ -0.4
CCDC47-202ENST00000403162 ZCCHC13Q8WW36 166 aaKnown RBP12.53□□□□□ -0.4
CCDC47-202ENST00000403162 CSMD3Q7Z407 3707 aa12.52□□□□□ -0.4
CCDC47-202ENST00000403162 UBE2DNLQ8IWF7 75 aa12.5□□□□□ -0.41
CCDC47-202ENST00000403162 HCG22E2RYF7 251 aa12.5□□□□□ -0.41
CCDC47-202ENST00000403162 IGFL1Q6UW32 110 aa12.5□□□□□ -0.41
CCDC47-202ENST00000403162 STARD9Q9P2P6 4700 aa12.49□□□□□ -0.41
CCDC47-202ENST00000403162 IGLV8-61A0A075B6I0 122 aa12.49□□□□□ -0.41
CCDC47-202ENST00000403162 PSCAO43653 123 aa12.48□□□□□ -0.41
CCDC47-202ENST00000403162 PLECQ15149 4684 aaKnown RBP12.46□□□□□ -0.41
CCDC47-202ENST00000403162 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.45□□□□□ -0.42
CCDC47-202ENST00000403162 hDV103S1A0JD37 113 aa12.45□□□□□ -0.42
CCDC47-202ENST00000403162 MPLKIPQ8TAP9 179 aa12.45□□□□□ -0.42
CCDC47-202ENST00000403162 C16orf90A8MZG2 172 aa12.45□□□□□ -0.42
CCDC47-202ENST00000403162 A0A096LNI7 61 aa12.43□□□□□ -0.42
CCDC47-202ENST00000403162 A0A0G2JQZ4 141 aa12.43□□□□□ -0.42
CCDC47-202ENST00000403162 A0A1W2PNN7 141 aa12.43□□□□□ -0.42
CCDC47-202ENST00000403162 PRLHP81277 87 aa12.43□□□□□ -0.42
CCDC47-202ENST00000403162 TENM2Q9NT68 2774 aa12.42□□□□□ -0.42
CCDC47-202ENST00000403162 CNBPP62633 177 aaKnown RBP12.41□□□□□ -0.42
CCDC47-202ENST00000403162 A0A087WSZ3 146 aa12.39□□□□□ -0.43
CCDC47-202ENST00000403162 LYSTQ99698 3801 aa12.39□□□□□ -0.43
CCDC47-202ENST00000403162 C1orf64Q8NEQ6 169 aa12.38□□□□□ -0.43
CCDC47-202ENST00000403162 IGKV2-24A0A0C4DH68 120 aa12.37□□□□□ -0.43
CCDC47-202ENST00000403162 DEFB116Q30KQ4 102 aa12.37□□□□□ -0.43
CCDC47-202ENST00000403162 CYP4F30PQ9H0H9 118 aa12.37□□□□□ -0.43
CCDC47-202ENST00000403162 BRK1Q8WUW1 75 aa12.36□□□□□ -0.43
CCDC47-202ENST00000403162 NDUFB1O75438 58 aa12.35□□□□□ -0.43
CCDC47-202ENST00000403162 UBE2AP49459 152 aa12.35□□□□□ -0.43
CCDC47-202ENST00000403162 KRTAP1-5Q9BYS1 174 aa12.35□□□□□ -0.43
CCDC47-202ENST00000403162 WFDC13Q8IUB5 93 aa12.34□□□□□ -0.43
CCDC47-202ENST00000403162 KRTAP29-1A8MX34 341 aaPredicted RBP12.33□□□□□ -0.44
CCDC47-202ENST00000403162 SPRR1BP22528 89 aa12.33□□□□□ -0.44
CCDC47-202ENST00000403162 H0Y9J4 135 aa12.32□□□□□ -0.44
CCDC47-202ENST00000403162 Q1T7F1 81 aa12.32□□□□□ -0.44
CCDC47-202ENST00000403162 MP68P56378 58 aa12.31□□□□□ -0.44
CCDC47-202ENST00000403162 LY6G6CO95867 125 aa12.3□□□□□ -0.44
CCDC47-202ENST00000403162 NBDYA0A0U1RRE5 68 aa12.29□□□□□ -0.44
CCDC47-202ENST00000403162 VPS13DQ5THJ4 4388 aa12.29□□□□□ -0.44
CCDC47-202ENST00000403162 RPL37AP61513 92 aaKnown RBP12.29□□□□□ -0.44
CCDC47-202ENST00000403162 TRAV22A0A0B4J277 110 aa12.28□□□□□ -0.44
CCDC47-202ENST00000403162 KRTAP11-1Q8IUC1 163 aa12.28□□□□□ -0.44
CCDC47-202ENST00000403162 PRR15Q8IV56 129 aa12.27□□□□□ -0.45
CCDC47-202ENST00000403162 PHF5AQ7RTV0 110 aaKnown RBP12.26□□□□□ -0.45
CCDC47-202ENST00000403162 LRCOL1A6NCL2 159 aa12.26□□□□□ -0.45
CCDC47-202ENST00000403162 C14orf177Q52M58 125 aa12.26□□□□□ -0.45
CCDC47-202ENST00000403162 DNAH10Q8IVF4 4471 aa12.25□□□□□ -0.45
CCDC47-202ENST00000403162 CASC2Q6XLA1 102 aa12.25□□□□□ -0.45
CCDC47-202ENST00000403162 H3BPC8 53 aa12.24□□□□□ -0.45
CCDC47-202ENST00000403162 LINC00472Q9H8W2 130 aa12.24□□□□□ -0.45
CCDC47-202ENST00000403162 A8MWP4 228 aa12.23□□□□□ -0.45
CCDC47-202ENST00000403162 LINC00208Q96KT6 92 aa12.23□□□□□ -0.45
CCDC47-202ENST00000403162 CHTF8P0CG12 524 aa12.23□□□□□ -0.45
CCDC47-202ENST00000403162 PRR4Q16378 134 aa12.22□□□□□ -0.45
CCDC47-202ENST00000403162 H0Y9P7 68 aa12.2□□□□□ -0.46
CCDC47-202ENST00000403162 PKIGQ9Y2B9 76 aa12.2□□□□□ -0.46
CCDC47-202ENST00000403162 SPANXA2-OT1Q8N9U9 137 aa12.2□□□□□ -0.46
CCDC47-202ENST00000403162 ALMS1Q8TCU4 4167 aa12.18□□□□□ -0.46
CCDC47-202ENST00000403162 Q6ZR54 194 aa12.18□□□□□ -0.46
CCDC47-202ENST00000403162 C9orf163Q8N9P6 203 aa12.17□□□□□ -0.46
CCDC47-202ENST00000403162 KMT2AQ03164 3969 aa12.14□□□□□ -0.47
CCDC47-202ENST00000403162 KRTAP13-1Q8IUC0 172 aa12.12□□□□□ -0.47
CCDC47-202ENST00000403162 V9GYY9 64 aa12.12□□□□□ -0.47
CCDC47-202ENST00000403162 Q6ZRN7 208 aaPredicted RBP12.12□□□□□ -0.47
CCDC47-202ENST00000403162 MMP24-AS1A0A0U1RRL7 71 aa12.11□□□□□ -0.47
CCDC47-202ENST00000403162 C1orf134Q5TEV5 83 aa12.1□□□□□ -0.47
CCDC47-202ENST00000403162 PSPHP1O15172 72 aa12.09□□□□□ -0.47
CCDC47-202ENST00000403162 SRRM2Q9UQ35 2752 aaKnown RBP12.09□□□□□ -0.47
CCDC47-202ENST00000403162 C1orf195Q5TG92 126 aa12.08□□□□□ -0.48
CCDC47-202ENST00000403162 DNAH6Q9C0G6 4158 aa12.08□□□□□ -0.48
CCDC47-202ENST00000403162 PANO1I0J062 215 aa12.04□□□□□ -0.48
CCDC47-202ENST00000403162 Q96NJ1 140 aa12.03□□□□□ -0.48
CCDC47-202ENST00000403162 HYDINQ4G0P3 5121 aa12.02□□□□□ -0.48
CCDC47-202ENST00000403162 ASB16-AS1Q495Z4 193 aa12.02□□□□□ -0.48
CCDC47-202ENST00000403162 A8MUN3 132 aa12.01□□□□□ -0.49
CCDC47-202ENST00000403162 DNAH2Q9P225 4427 aa12□□□□□ -0.49
CCDC47-202ENST00000403162 SACSQ9NZJ4 4579 aa12□□□□□ -0.49
CCDC47-202ENST00000403162 MOBPQ13875 183 aa11.99□□□□□ -0.49
CCDC47-202ENST00000403162 A0A087WTM6 91 aa11.98□□□□□ -0.49
CCDC47-202ENST00000403162 TP53AIP1Q9HCN2 124 aa11.98□□□□□ -0.49
CCDC47-202ENST00000403162 LINC00483Q53H64 154 aa11.98□□□□□ -0.49
CCDC47-202ENST00000403162 Q8N9P0 234 aaPredicted RBP11.98□□□□□ -0.49
CCDC47-202ENST00000403162 IGLV7-46A0A075B6I9 117 aa11.97□□□□□ -0.49
CCDC47-202ENST00000403162 Q5VV11 94 aa11.97□□□□□ -0.49
CCDC47-202ENST00000403162 SPACA4Q8TDM5 124 aa11.97□□□□□ -0.49
CCDC47-202ENST00000403162 IGLV9-49A0A0B4J1Y8 123 aa11.96□□□□□ -0.49
CCDC47-202ENST00000403162 LIMD2Q9BT23 127 aa11.96□□□□□ -0.49
CCDC47-202ENST00000403162 RTL8CO15255 209 aa11.96□□□□□ -0.5
CCDC47-202ENST00000403162 C8orf17Q9NRJ1 99 aa11.94□□□□□ -0.5
CCDC47-202ENST00000403162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.94□□□□□ -0.5
CCDC47-202ENST00000403162 COA5Q86WW8 74 aa11.91□□□□□ -0.5
CCDC47-202ENST00000403162 DNAH17Q9UFH2 4485 aa11.9□□□□□ -0.5
CCDC47-202ENST00000403162 ZNF706Q9Y5V0 76 aaPredicted RBP11.9□□□□□ -0.5
CCDC47-202ENST00000403162 A0A1B0GVX0 72 aa11.88□□□□□ -0.51
CCDC47-202ENST00000403162 FRAS1Q86XX4 4008 aa11.88□□□□□ -0.51
CCDC47-202ENST00000403162 CD164Q04900 197 aa11.86□□□□□ -0.51
CCDC47-202ENST00000403162 KMT2CQ8NEZ4 4911 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms