RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 STAB2Q8WWQ8 2551 aa5.65□□□□□ -1.5
NDE1-202ENST00000396355 MOBPQ13875 183 aa5.65□□□□□ -1.5
NDE1-202ENST00000396355 C16orf74Q96GX8 76 aa5.64□□□□□ -1.51
NDE1-202ENST00000396355 MEGF8Q7Z7M0 2845 aa5.64□□□□□ -1.51
NDE1-202ENST00000396355 KRTAP10-3P60369 221 aa5.63□□□□□ -1.51
NDE1-202ENST00000396355 SPINK7P58062 85 aa5.62□□□□□ -1.51
NDE1-202ENST00000396355 C1orf134Q5TEV5 83 aa5.62□□□□□ -1.51
NDE1-202ENST00000396355 COX17Q14061 63 aa5.61□□□□□ -1.51
NDE1-202ENST00000396355 TENM3Q9P273 2699 aa5.61□□□□□ -1.51
NDE1-202ENST00000396355 CSAG1Q6PB30 78 aa5.6□□□□□ -1.51
NDE1-202ENST00000396355 TRRAPQ9Y4A5 3859 aa5.6□□□□□ -1.51
NDE1-202ENST00000396355 A0A1B0GU69 56 aa5.6□□□□□ -1.51
NDE1-202ENST00000396355 SPINK1P00995 79 aa5.59□□□□□ -1.51
NDE1-202ENST00000396355 GIG44P09565 113 aaPredicted RBP5.59□□□□□ -1.51
NDE1-202ENST00000396355 IGKV2-24A0A0C4DH68 120 aa5.59□□□□□ -1.52
NDE1-202ENST00000396355 C9orf66Q5T8R8 295 aa5.59□□□□□ -1.52
NDE1-202ENST00000396355 PHF5AQ7RTV0 110 aaKnown RBP5.59□□□□□ -1.52
NDE1-202ENST00000396355 PRO0255Q9UI72 69 aa5.59□□□□□ -1.52
NDE1-202ENST00000396355 K7EIL1 84 aa5.58□□□□□ -1.52
NDE1-202ENST00000396355 IGLV1-51P01701 117 aa5.58□□□□□ -1.52
NDE1-202ENST00000396355 SPINK6Q6UWN8 80 aa5.57□□□□□ -1.52
NDE1-202ENST00000396355 Q8NAQ8 132 aa5.57□□□□□ -1.52
NDE1-202ENST00000396355 LINC00476Q8WZB0 136 aa5.57□□□□□ -1.52
NDE1-202ENST00000396355 SPART-AS1P0CW21 52 aa5.56□□□□□ -1.52
NDE1-202ENST00000396355 SPINT4Q6UDR6 99 aa5.56□□□□□ -1.52
NDE1-202ENST00000396355 A6NN06 94 aa5.56□□□□□ -1.52
NDE1-202ENST00000396355 Q75L30 129 aa5.56□□□□□ -1.52
NDE1-202ENST00000396355 LINC00612Q8N6U2 182 aa5.56□□□□□ -1.52
NDE1-202ENST00000396355 C19orf73Q9NVV2 129 aa5.55□□□□□ -1.52
NDE1-202ENST00000396355 ANK2Q01484 3957 aa5.54□□□□□ -1.52
NDE1-202ENST00000396355 IGHV6-1A0A0B4J1U7 121 aa5.54□□□□□ -1.52
NDE1-202ENST00000396355 LINC00167Q96N53 147 aa5.54□□□□□ -1.52
NDE1-202ENST00000396355 ELOF1P60002 83 aaKnown RBP5.54□□□□□ -1.52
NDE1-202ENST00000396355 SSBP3-AS1Q7Z2R9 100 aa5.53□□□□□ -1.52
NDE1-202ENST00000396355 Q8NBF4 154 aa5.53□□□□□ -1.52
NDE1-202ENST00000396355 C7orf33Q8WU49 177 aa5.53□□□□□ -1.52
NDE1-202ENST00000396355 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
NDE1-202ENST00000396355 CSNK1G2-AS1Q8NCQ2 148 aa5.53□□□□□ -1.52
NDE1-202ENST00000396355 DHRS4-AS1Q9P1J3 65 aa5.52□□□□□ -1.53
NDE1-202ENST00000396355 KRTAP10-11P60412 298 aa5.51□□□□□ -1.53
NDE1-202ENST00000396355 Q8NDZ9 215 aa5.51□□□□□ -1.53
NDE1-202ENST00000396355 TENM2Q9NT68 2774 aa5.51□□□□□ -1.53
NDE1-202ENST00000396355 IGLV6-57P01721 117 aa5.5□□□□□ -1.53
NDE1-202ENST00000396355 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
NDE1-202ENST00000396355 A0A1W2PNM2 257 aa5.5□□□□□ -1.53
NDE1-202ENST00000396355 C6orf48Q9UBA6 75 aa5.5□□□□□ -1.53
NDE1-202ENST00000396355 LY6G6CO95867 125 aa5.49□□□□□ -1.53
NDE1-202ENST00000396355 UBE2DNLQ8IWF7 75 aa5.49□□□□□ -1.53
NDE1-202ENST00000396355 PRLHP81277 87 aa5.49□□□□□ -1.53
NDE1-202ENST00000396355 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
NDE1-202ENST00000396355 Q8N377 158 aa5.48□□□□□ -1.53
NDE1-202ENST00000396355 DSCR10P59022 87 aa5.48□□□□□ -1.53
NDE1-202ENST00000396355 REG3GQ6UW15 175 aa5.47□□□□□ -1.53
NDE1-202ENST00000396355 A0A0A0MQY5 61 aa5.46□□□□□ -1.53
NDE1-202ENST00000396355 K7ERS5 55 aa5.46□□□□□ -1.53
NDE1-202ENST00000396355 UQCR11O14957 56 aa5.46□□□□□ -1.54
NDE1-202ENST00000396355 CASC10Q5T4H9 136 aa5.46□□□□□ -1.54
NDE1-202ENST00000396355 Q9BRP9 147 aa5.45□□□□□ -1.54
NDE1-202ENST00000396355 LINC00528Q8N1L1 170 aa5.45□□□□□ -1.54
NDE1-202ENST00000396355 C9orf163Q8N9P6 203 aa5.44□□□□□ -1.54
NDE1-202ENST00000396355 EGFEM1PQ0D2K5 195 aa5.44□□□□□ -1.54
NDE1-202ENST00000396355 DEFB131BA0A096LNP1 70 aa5.44□□□□□ -1.54
NDE1-202ENST00000396355 A0A1B0GUV1 79 aa5.44□□□□□ -1.54
NDE1-202ENST00000396355 SPANXA2-OT1Q8N9U9 137 aa5.43□□□□□ -1.54
NDE1-202ENST00000396355 ACYP2P14621 99 aa5.42□□□□□ -1.54
NDE1-202ENST00000396355 H3BPC8 53 aa5.42□□□□□ -1.54
NDE1-202ENST00000396355 X6R8D5 127 aa5.42□□□□□ -1.54
NDE1-202ENST00000396355 LINC01558Q9Y6Z2 57 aa5.42□□□□□ -1.54
NDE1-202ENST00000396355 KCNQ1DNQ9H478 68 aa5.41□□□□□ -1.54
NDE1-202ENST00000396355 CMYA5Q8N3K9 4069 aa5.4□□□□□ -1.55
NDE1-202ENST00000396355 A8MWP4 228 aa5.4□□□□□ -1.55
NDE1-202ENST00000396355 LCE6AA0A183 80 aa5.39□□□□□ -1.55
NDE1-202ENST00000396355 LELP1Q5T871 98 aa5.39□□□□□ -1.55
NDE1-202ENST00000396355 FAM168BA1KXE4 195 aa5.39□□□□□ -1.55
NDE1-202ENST00000396355 Q6ZRX8 168 aa5.38□□□□□ -1.55
NDE1-202ENST00000396355 IGFL1Q6UW32 110 aa5.37□□□□□ -1.55
NDE1-202ENST00000396355 ZCCHC13Q8WW36 166 aaKnown RBP5.37□□□□□ -1.55
NDE1-202ENST00000396355 RTL8CO15255 209 aa5.37□□□□□ -1.55
NDE1-202ENST00000396355 IGLV7-46A0A075B6I9 117 aa5.37□□□□□ -1.55
NDE1-202ENST00000396355 IGKV2D-30A0A075B6S6 120 aa5.37□□□□□ -1.55
NDE1-202ENST00000396355 IGKV2-30P06310 120 aa5.37□□□□□ -1.55
NDE1-202ENST00000396355 HRES1P13985 223 aa5.36□□□□□ -1.55
NDE1-202ENST00000396355 IGLV1-50A0A075B6I6 118 aa5.35□□□□□ -1.55
NDE1-202ENST00000396355 DNAH10OSP0CZ25 163 aa5.34□□□□□ -1.55
NDE1-202ENST00000396355 Q6ZR54 194 aa5.34□□□□□ -1.56
NDE1-202ENST00000396355 LYSTQ99698 3801 aa5.33□□□□□ -1.56
NDE1-202ENST00000396355 TP53AIP1Q9HCN2 124 aa5.33□□□□□ -1.56
NDE1-202ENST00000396355 PLA2G1BP04054 148 aaKnown RBP5.32□□□□□ -1.56
NDE1-202ENST00000396355 COL7A1Q02388 2944 aa5.32□□□□□ -1.56
NDE1-202ENST00000396355 IGLV5-48A0A075B6I7 105 aa5.32□□□□□ -1.56
NDE1-202ENST00000396355 A0A1B0GW54 56 aa5.32□□□□□ -1.56
NDE1-202ENST00000396355 NUPR2A6NF83 97 aa5.31□□□□□ -1.56
NDE1-202ENST00000396355 DNAH3Q8TD57 4116 aa5.3□□□□□ -1.56
NDE1-202ENST00000396355 DNAH1Q9P2D7 4330 aa5.3□□□□□ -1.56
NDE1-202ENST00000396355 NDUFAF8A1L188 74 aa5.29□□□□□ -1.56
NDE1-202ENST00000396355 CNBPP62633 177 aaKnown RBP5.28□□□□□ -1.56
NDE1-202ENST00000396355 KRTAP16-1A8MUX0 517 aa5.28□□□□□ -1.56
NDE1-202ENST00000396355 PRKDCP78527 4128 aaKnown RBP5.28□□□□□ -1.56
NDE1-202ENST00000396355 ROMO1P60602 79 aa5.27□□□□□ -1.57
NDE1-202ENST00000396355 PRR34Q9NV39 138 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms