RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 LCE6AA0A183 80 aa11.62□□□□□ -0.55
PCDHA1-202ENST00000394633 LINC00476Q8WZB0 136 aa11.62□□□□□ -0.55
PCDHA1-202ENST00000394633 K7EQZ3 153 aa11.62□□□□□ -0.55
PCDHA1-202ENST00000394633 FAM229BQ4G0N7 80 aa11.61□□□□□ -0.55
PCDHA1-202ENST00000394633 A0A0G2JQZ4 141 aa11.6□□□□□ -0.55
PCDHA1-202ENST00000394633 A0A1W2PNN7 141 aa11.6□□□□□ -0.55
PCDHA1-202ENST00000394633 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
PCDHA1-202ENST00000394633 IGFL1Q6UW32 110 aa11.57□□□□□ -0.56
PCDHA1-202ENST00000394633 A0A096LNI7 61 aa11.55□□□□□ -0.56
PCDHA1-202ENST00000394633 PRLHP81277 87 aa11.55□□□□□ -0.56
PCDHA1-202ENST00000394633 PSCAO43653 123 aa11.54□□□□□ -0.56
PCDHA1-202ENST00000394633 ZCCHC13Q8WW36 166 aaKnown RBP11.54□□□□□ -0.56
PCDHA1-202ENST00000394633 DNAH10Q8IVF4 4471 aa11.53□□□□□ -0.56
PCDHA1-202ENST00000394633 IGKV2-24A0A0C4DH68 120 aa11.52□□□□□ -0.56
PCDHA1-202ENST00000394633 HCG22E2RYF7 251 aa11.52□□□□□ -0.57
PCDHA1-202ENST00000394633 C16orf90A8MZG2 172 aa11.51□□□□□ -0.57
PCDHA1-202ENST00000394633 KRTAP1-5Q9BYS1 174 aa11.51□□□□□ -0.57
PCDHA1-202ENST00000394633 DEFB116Q30KQ4 102 aa11.5□□□□□ -0.57
PCDHA1-202ENST00000394633 IGLV8-61A0A075B6I0 122 aa11.5□□□□□ -0.57
PCDHA1-202ENST00000394633 APLNQ9ULZ1 77 aa11.49□□□□□ -0.57
PCDHA1-202ENST00000394633 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.48□□□□□ -0.57
PCDHA1-202ENST00000394633 MPLKIPQ8TAP9 179 aa11.48□□□□□ -0.57
PCDHA1-202ENST00000394633 PRO0628Q9UI54 55 aa11.48□□□□□ -0.57
PCDHA1-202ENST00000394633 A0A087WSZ3 146 aa11.47□□□□□ -0.57
PCDHA1-202ENST00000394633 CNBPP62633 177 aaKnown RBP11.47□□□□□ -0.57
PCDHA1-202ENST00000394633 hDV103S1A0JD37 113 aa11.45□□□□□ -0.58
PCDHA1-202ENST00000394633 VPS13DQ5THJ4 4388 aa11.44□□□□□ -0.58
PCDHA1-202ENST00000394633 KRTAP11-1Q8IUC1 163 aa11.44□□□□□ -0.58
PCDHA1-202ENST00000394633 NUPR2A6NF83 97 aa11.43□□□□□ -0.58
PCDHA1-202ENST00000394633 WFDC13Q8IUB5 93 aa11.43□□□□□ -0.58
PCDHA1-202ENST00000394633 UBE2AP49459 152 aa11.43□□□□□ -0.58
PCDHA1-202ENST00000394633 KMT2AQ03164 3969 aa11.42□□□□□ -0.58
PCDHA1-202ENST00000394633 RPL37AP61513 92 aaKnown RBP11.41□□□□□ -0.58
PCDHA1-202ENST00000394633 PHF5AQ7RTV0 110 aaKnown RBP11.41□□□□□ -0.58
PCDHA1-202ENST00000394633 CHTF8P0CG12 524 aa11.4□□□□□ -0.58
PCDHA1-202ENST00000394633 C1orf64Q8NEQ6 169 aa11.4□□□□□ -0.58
PCDHA1-202ENST00000394633 UBE2DNLQ8IWF7 75 aa11.38□□□□□ -0.59
PCDHA1-202ENST00000394633 KRTAP29-1A8MX34 341 aaPredicted RBP11.37□□□□□ -0.59
PCDHA1-202ENST00000394633 SPRR1BP22528 89 aa11.36□□□□□ -0.59
PCDHA1-202ENST00000394633 LRCOL1A6NCL2 159 aa11.36□□□□□ -0.59
PCDHA1-202ENST00000394633 BRK1Q8WUW1 75 aa11.35□□□□□ -0.59
PCDHA1-202ENST00000394633 CYP4F30PQ9H0H9 118 aa11.35□□□□□ -0.59
PCDHA1-202ENST00000394633 H0Y9J4 135 aa11.34□□□□□ -0.59
PCDHA1-202ENST00000394633 PRR4Q16378 134 aa11.33□□□□□ -0.59
PCDHA1-202ENST00000394633 SRRM2Q9UQ35 2752 aaKnown RBP11.32□□□□□ -0.6
PCDHA1-202ENST00000394633 MP68P56378 58 aa11.32□□□□□ -0.6
PCDHA1-202ENST00000394633 C14orf177Q52M58 125 aa11.32□□□□□ -0.6
PCDHA1-202ENST00000394633 PRR15Q8IV56 129 aa11.31□□□□□ -0.6
PCDHA1-202ENST00000394633 LINC00472Q9H8W2 130 aa11.31□□□□□ -0.6
PCDHA1-202ENST00000394633 TRAV22A0A0B4J277 110 aa11.3□□□□□ -0.6
PCDHA1-202ENST00000394633 NDUFB1O75438 58 aa11.3□□□□□ -0.6
PCDHA1-202ENST00000394633 CASC2Q6XLA1 102 aa11.29□□□□□ -0.6
PCDHA1-202ENST00000394633 LINC00208Q96KT6 92 aa11.29□□□□□ -0.6
PCDHA1-202ENST00000394633 DNAH2Q9P225 4427 aa11.29□□□□□ -0.6
PCDHA1-202ENST00000394633 Q1T7F1 81 aa11.28□□□□□ -0.6
PCDHA1-202ENST00000394633 A8MWP4 228 aa11.28□□□□□ -0.6
PCDHA1-202ENST00000394633 C9orf163Q8N9P6 203 aa11.28□□□□□ -0.6
PCDHA1-202ENST00000394633 H0Y9P7 68 aa11.25□□□□□ -0.61
PCDHA1-202ENST00000394633 WWC2-AS2Q96NR7 200 aa11.24□□□□□ -0.61
PCDHA1-202ENST00000394633 PANO1I0J062 215 aa11.23□□□□□ -0.61
PCDHA1-202ENST00000394633 NBDYA0A0U1RRE5 68 aa11.23□□□□□ -0.61
PCDHA1-202ENST00000394633 PKIGQ9Y2B9 76 aa11.23□□□□□ -0.61
PCDHA1-202ENST00000394633 KRTAP13-1Q8IUC0 172 aa11.22□□□□□ -0.61
PCDHA1-202ENST00000394633 H3BPC8 53 aa11.21□□□□□ -0.62
PCDHA1-202ENST00000394633 HYDINQ4G0P3 5121 aa11.19□□□□□ -0.62
PCDHA1-202ENST00000394633 MMP24-AS1A0A0U1RRL7 71 aa11.18□□□□□ -0.62
PCDHA1-202ENST00000394633 SPANXA2-OT1Q8N9U9 137 aa11.17□□□□□ -0.62
PCDHA1-202ENST00000394633 ALMS1Q8TCU4 4167 aa11.15□□□□□ -0.62
PCDHA1-202ENST00000394633 PSPHP1O15172 72 aa11.15□□□□□ -0.62
PCDHA1-202ENST00000394633 Q6ZRN7 208 aaPredicted RBP11.15□□□□□ -0.62
PCDHA1-202ENST00000394633 DNAH6Q9C0G6 4158 aa11.14□□□□□ -0.63
PCDHA1-202ENST00000394633 LY6G6CO95867 125 aa11.13□□□□□ -0.63
PCDHA1-202ENST00000394633 Q96NJ1 140 aa11.13□□□□□ -0.63
PCDHA1-202ENST00000394633 IGLV9-49A0A0B4J1Y8 123 aa11.12□□□□□ -0.63
PCDHA1-202ENST00000394633 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.11□□□□□ -0.63
PCDHA1-202ENST00000394633 Q6ZR54 194 aa11.11□□□□□ -0.63
PCDHA1-202ENST00000394633 FRAS1Q86XX4 4008 aa11.1□□□□□ -0.63
PCDHA1-202ENST00000394633 SACSQ9NZJ4 4579 aa11.1□□□□□ -0.63
PCDHA1-202ENST00000394633 SPACA4Q8TDM5 124 aa11.09□□□□□ -0.63
PCDHA1-202ENST00000394633 HECTD4Q9Y4D8 3996 aa11.09□□□□□ -0.63
PCDHA1-202ENST00000394633 DNAH17Q9UFH2 4485 aa11.08□□□□□ -0.64
PCDHA1-202ENST00000394633 A8MUN3 132 aa11.07□□□□□ -0.64
PCDHA1-202ENST00000394633 ASB16-AS1Q495Z4 193 aa11.07□□□□□ -0.64
PCDHA1-202ENST00000394633 V9GYY9 64 aa11.07□□□□□ -0.64
PCDHA1-202ENST00000394633 C1orf195Q5TG92 126 aa11.06□□□□□ -0.64
PCDHA1-202ENST00000394633 LINC00483Q53H64 154 aa11.05□□□□□ -0.64
PCDHA1-202ENST00000394633 MOBPQ13875 183 aa11.04□□□□□ -0.64
PCDHA1-202ENST00000394633 C8orf17Q9NRJ1 99 aa11.03□□□□□ -0.64
PCDHA1-202ENST00000394633 Q8N9P0 234 aaPredicted RBP11.02□□□□□ -0.65
PCDHA1-202ENST00000394633 IGLV7-46A0A075B6I9 117 aa11.01□□□□□ -0.65
PCDHA1-202ENST00000394633 Q5VV11 94 aa11.01□□□□□ -0.65
PCDHA1-202ENST00000394633 FAT2Q9NYQ8 4349 aa11.01□□□□□ -0.65
PCDHA1-202ENST00000394633 TP53AIP1Q9HCN2 124 aa11□□□□□ -0.65
PCDHA1-202ENST00000394633 PCOTHQ58A44 107 aa10.98□□□□□ -0.65
PCDHA1-202ENST00000394633 A0A087WTM6 91 aa10.97□□□□□ -0.65
PCDHA1-202ENST00000394633 C1orf134Q5TEV5 83 aa10.97□□□□□ -0.65
PCDHA1-202ENST00000394633 COA5Q86WW8 74 aa10.97□□□□□ -0.65
PCDHA1-202ENST00000394633 DNAH8Q96JB1 4490 aa10.97□□□□□ -0.65
PCDHA1-202ENST00000394633 DNAH11Q96DT5 4516 aa10.97□□□□□ -0.65
PCDHA1-202ENST00000394633 KMT2CQ8NEZ4 4911 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms