RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 PRR15LQ9BU68 103 aa14.05□□□□□ -0.16
CLDND1-202ENST00000394180 CDC42SE1Q9NRR8 79 aa14.05□□□□□ -0.16
CLDND1-202ENST00000394180 A8MU10 97 aa14.05□□□□□ -0.16
CLDND1-202ENST00000394180 K7EIL1 84 aa14.03□□□□□ -0.16
CLDND1-202ENST00000394180 PLA2G2DQ9UNK4 145 aa14.03□□□□□ -0.16
CLDND1-202ENST00000394180 LCA10Q71F78 164 aa14.03□□□□□ -0.16
CLDND1-202ENST00000394180 TENM3Q9P273 2699 aa14.03□□□□□ -0.16
CLDND1-202ENST00000394180 DEFB4AO15263 64 aa14.02□□□□□ -0.17
CLDND1-202ENST00000394180 KRTAP21-3Q3LHN1 58 aa14.01□□□□□ -0.17
CLDND1-202ENST00000394180 NKAPP1Q8N9T2 125 aa14□□□□□ -0.17
CLDND1-202ENST00000394180 KRTAP4-16G5E9R7 235 aaPredicted RBP14□□□□□ -0.17
CLDND1-202ENST00000394180 SPRR1AP35321 89 aa13.99□□□□□ -0.17
CLDND1-202ENST00000394180 C7orf65Q6ZTY9 151 aa13.99□□□□□ -0.17
CLDND1-202ENST00000394180 IGKV2D-24A0A075B6R9 120 aa13.98□□□□□ -0.17
CLDND1-202ENST00000394180 KRTAP26-1Q6PEX3 210 aa13.98□□□□□ -0.17
CLDND1-202ENST00000394180 KRTAP29-1A8MX34 341 aaPredicted RBP13.98□□□□□ -0.17
CLDND1-202ENST00000394180 C9orf163Q8N9P6 203 aa13.97□□□□□ -0.17
CLDND1-202ENST00000394180 SPTSSBQ8NFR3 76 aa13.97□□□□□ -0.17
CLDND1-202ENST00000394180 C7orf33Q8WU49 177 aa13.97□□□□□ -0.17
CLDND1-202ENST00000394180 IGLV5-37A0A075B6J1 123 aa13.95□□□□□ -0.18
CLDND1-202ENST00000394180 A6NED7 52 aa13.95□□□□□ -0.18
CLDND1-202ENST00000394180 C15orf56Q8N910 161 aa13.94□□□□□ -0.18
CLDND1-202ENST00000394180 Q8NAQ8 132 aa13.94□□□□□ -0.18
CLDND1-202ENST00000394180 COL7A1Q02388 2944 aa13.94□□□□□ -0.18
CLDND1-202ENST00000394180 MEGF8Q7Z7M0 2845 aa13.94□□□□□ -0.18
CLDND1-202ENST00000394180 H0Y9P7 68 aa13.93□□□□□ -0.18
CLDND1-202ENST00000394180 TLX1NBP0CAT3 122 aa13.91□□□□□ -0.18
CLDND1-202ENST00000394180 IGLV7-46A0A075B6I9 117 aa13.9□□□□□ -0.18
CLDND1-202ENST00000394180 LINC01558Q9Y6Z2 57 aa13.9□□□□□ -0.18
CLDND1-202ENST00000394180 HUWE1Q7Z6Z7 4374 aaKnown RBP13.89□□□□□ -0.19
CLDND1-202ENST00000394180 PLAC8Q9NZF1 115 aa13.89□□□□□ -0.19
CLDND1-202ENST00000394180 IGLV1-50A0A075B6I6 118 aa13.87□□□□□ -0.19
CLDND1-202ENST00000394180 COA5Q86WW8 74 aa13.87□□□□□ -0.19
CLDND1-202ENST00000394180 IGLV8-61A0A075B6I0 122 aa13.86□□□□□ -0.19
CLDND1-202ENST00000394180 WFDC13Q8IUB5 93 aa13.86□□□□□ -0.19
CLDND1-202ENST00000394180 PRKDCP78527 4128 aaKnown RBP13.86□□□□□ -0.19
CLDND1-202ENST00000394180 SPART-AS1P0CW21 52 aa13.84□□□□□ -0.19
CLDND1-202ENST00000394180 SERTAD4-AS1Q5TG53 156 aa13.84□□□□□ -0.19
CLDND1-202ENST00000394180 DNAH9Q9NYC9 4486 aa13.84□□□□□ -0.19
CLDND1-202ENST00000394180 LINC00476Q8WZB0 136 aa13.83□□□□□ -0.2
CLDND1-202ENST00000394180 CASC2Q6XLA1 102 aa13.82□□□□□ -0.2
CLDND1-202ENST00000394180 H3BNG1 76 aa13.81□□□□□ -0.2
CLDND1-202ENST00000394180 MOBPQ13875 183 aa13.79□□□□□ -0.2
CLDND1-202ENST00000394180 WFDC10BQ8IUB3 73 aa13.79□□□□□ -0.2
CLDND1-202ENST00000394180 RPL37AP8A6NKH3 93 aa13.78□□□□□ -0.2
CLDND1-202ENST00000394180 CNBPP62633 177 aaKnown RBP13.78□□□□□ -0.2
CLDND1-202ENST00000394180 STAB2Q8WWQ8 2551 aa13.77□□□□□ -0.2
CLDND1-202ENST00000394180 IGFL1Q6UW32 110 aa13.77□□□□□ -0.21
CLDND1-202ENST00000394180 HTN3P15516 51 aa13.75□□□□□ -0.21
CLDND1-202ENST00000394180 A8MWP4 228 aa13.72□□□□□ -0.21
CLDND1-202ENST00000394180 C4orf48Q5BLP8 95 aa13.71□□□□□ -0.21
CLDND1-202ENST00000394180 DEFB116Q30KQ4 102 aa13.71□□□□□ -0.22
CLDND1-202ENST00000394180 C11orf45Q8TAV5 145 aa13.69□□□□□ -0.22
CLDND1-202ENST00000394180 A0A087WSZ3 146 aa13.68□□□□□ -0.22
CLDND1-202ENST00000394180 ASB16-AS1Q495Z4 193 aa13.68□□□□□ -0.22
CLDND1-202ENST00000394180 FBN3Q75N90 2809 aa13.68□□□□□ -0.22
CLDND1-202ENST00000394180 A0A087X002 238 aa13.67□□□□□ -0.22
CLDND1-202ENST00000394180 C8orf87E5RJ46 101 aa13.67□□□□□ -0.22
CLDND1-202ENST00000394180 TP53AIP1Q9HCN2 124 aa13.66□□□□□ -0.22
CLDND1-202ENST00000394180 LINC01556Q5JQF7 62 aa13.64□□□□□ -0.23
CLDND1-202ENST00000394180 REG3GQ6UW15 175 aa13.63□□□□□ -0.23
CLDND1-202ENST00000394180 LINC00472Q9H8W2 130 aa13.62□□□□□ -0.23
CLDND1-202ENST00000394180 RPL37AP61513 92 aaKnown RBP13.6□□□□□ -0.23
CLDND1-202ENST00000394180 CSMD3Q7Z407 3707 aa13.59□□□□□ -0.23
CLDND1-202ENST00000394180 DEFB131BA0A096LNP1 70 aa13.59□□□□□ -0.23
CLDND1-202ENST00000394180 TGP01266 2768 aa13.59□□□□□ -0.23
CLDND1-202ENST00000394180 KRTAP7-1Q8IUC3 87 aa13.57□□□□□ -0.24
CLDND1-202ENST00000394180 SPAG11AQ6PDA7 123 aa13.56□□□□□ -0.24
CLDND1-202ENST00000394180 Q6ZR54 194 aa13.56□□□□□ -0.24
CLDND1-202ENST00000394180 MMP24-AS1A0A0U1RRL7 71 aa13.55□□□□□ -0.24
CLDND1-202ENST00000394180 FAM168BA1KXE4 195 aa13.54□□□□□ -0.24
CLDND1-202ENST00000394180 SPINK7P58062 85 aa13.54□□□□□ -0.24
CLDND1-202ENST00000394180 LYSTQ99698 3801 aa13.54□□□□□ -0.24
CLDND1-202ENST00000394180 SPRR1BP22528 89 aa13.52□□□□□ -0.24
CLDND1-202ENST00000394180 PLA2G1BP04054 148 aaKnown RBP13.51□□□□□ -0.25
CLDND1-202ENST00000394180 DNAH7Q8WXX0 4024 aa13.51□□□□□ -0.25
CLDND1-202ENST00000394180 TENM2Q9NT68 2774 aa13.49□□□□□ -0.25
CLDND1-202ENST00000394180 LINC00313P59037 77 aa13.48□□□□□ -0.25
CLDND1-202ENST00000394180 A0A0G2JQZ4 141 aa13.47□□□□□ -0.25
CLDND1-202ENST00000394180 A0A1W2PNN7 141 aa13.47□□□□□ -0.25
CLDND1-202ENST00000394180 HRES1P13985 223 aa13.47□□□□□ -0.25
CLDND1-202ENST00000394180 DNAH10OSP0CZ25 163 aa13.44□□□□□ -0.26
CLDND1-202ENST00000394180 IGKV2-24A0A0C4DH68 120 aa13.43□□□□□ -0.26
CLDND1-202ENST00000394180 PCOTHQ58A44 107 aa13.42□□□□□ -0.26
CLDND1-202ENST00000394180 STARD9Q9P2P6 4700 aa13.41□□□□□ -0.26
CLDND1-202ENST00000394180 DYNC2H1Q8NCM8 4307 aaKnown RBP13.41□□□□□ -0.26
CLDND1-202ENST00000394180 LINC01554Q52M75 96 aa13.41□□□□□ -0.26
CLDND1-202ENST00000394180 H0Y9J4 135 aa13.4□□□□□ -0.26
CLDND1-202ENST00000394180 PLECQ15149 4684 aaKnown RBP13.39□□□□□ -0.27
CLDND1-202ENST00000394180 PRLHP81277 87 aa13.31□□□□□ -0.28
CLDND1-202ENST00000394180 C8orf17Q9NRJ1 99 aa13.29□□□□□ -0.28
CLDND1-202ENST00000394180 APLNQ9ULZ1 77 aa13.29□□□□□ -0.28
CLDND1-202ENST00000394180 NUPR2A6NF83 97 aa13.28□□□□□ -0.28
CLDND1-202ENST00000394180 DNAH1Q9P2D7 4330 aa13.27□□□□□ -0.29
CLDND1-202ENST00000394180 RTL8CO15255 209 aa13.27□□□□□ -0.29
CLDND1-202ENST00000394180 SPATA8Q6RVD6 105 aa13.25□□□□□ -0.29
CLDND1-202ENST00000394180 PRAC1Q96KF2 57 aa13.24□□□□□ -0.29
CLDND1-202ENST00000394180 Q96NJ1 140 aa13.23□□□□□ -0.29
CLDND1-202ENST00000394180 ACYP2P14621 99 aa13.21□□□□□ -0.29
CLDND1-202ENST00000394180 H3BS24 57 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms