RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 BCE1O60756 84 aa12.67□□□□□ -0.38
ME3-202ENST00000393324 IGLV5-48A0A075B6I7 105 aa12.66□□□□□ -0.38
ME3-202ENST00000393324 IGLV5-52A0A0A0MRZ9 124 aa12.66□□□□□ -0.38
ME3-202ENST00000393324 TNP2Q05952 138 aa12.65□□□□□ -0.38
ME3-202ENST00000393324 EPM2AB3EWF7 344 aa12.64□□□□□ -0.39
ME3-202ENST00000393324 HIGD2AQ9BW72 106 aa12.63□□□□□ -0.39
ME3-202ENST00000393324 FRAS1Q86XX4 4008 aa12.62□□□□□ -0.39
ME3-202ENST00000393324 C4orf26Q17RF5 130 aa12.62□□□□□ -0.39
ME3-202ENST00000393324 C20orf197Q8N268 126 aa12.62□□□□□ -0.39
ME3-202ENST00000393324 HYDINQ4G0P3 5121 aa12.61□□□□□ -0.39
ME3-202ENST00000393324 TRAV7A0A075B6U4 112 aa12.6□□□□□ -0.39
ME3-202ENST00000393324 H0Y9J4 135 aa12.6□□□□□ -0.39
ME3-202ENST00000393324 FAM236DA0A1B0GTK5 79 aa12.59□□□□□ -0.39
ME3-202ENST00000393324 H7BZZ5 65 aa12.59□□□□□ -0.39
ME3-202ENST00000393324 FAM236CP0DP71 79 aa12.59□□□□□ -0.39
ME3-202ENST00000393324 UBE2AP49459 152 aa12.57□□□□□ -0.4
ME3-202ENST00000393324 KLKP1Q107X0 134 aa12.56□□□□□ -0.4
ME3-202ENST00000393324 Q6ZVQ6 151 aa12.56□□□□□ -0.4
ME3-202ENST00000393324 HRCT1Q6UXD1 115 aa12.55□□□□□ -0.4
ME3-202ENST00000393324 PLAC8Q9NZF1 115 aa12.55□□□□□ -0.4
ME3-202ENST00000393324 SMIM29Q86T20 159 aa12.54□□□□□ -0.4
ME3-202ENST00000393324 SRRM2Q9UQ35 2752 aaKnown RBP12.54□□□□□ -0.4
ME3-202ENST00000393324 SERP1Q9Y6X1 66 aa12.53□□□□□ -0.4
ME3-202ENST00000393324 CXCL6P80162 114 aa12.53□□□□□ -0.4
ME3-202ENST00000393324 DNAH11Q96DT5 4516 aa12.52□□□□□ -0.4
ME3-202ENST00000393324 KRTAP10-2P60368 255 aa12.52□□□□□ -0.41
ME3-202ENST00000393324 DNAH8Q96JB1 4490 aa12.51□□□□□ -0.41
ME3-202ENST00000393324 C1orf137Q5JT78 98 aa12.5□□□□□ -0.41
ME3-202ENST00000393324 KRTAP13-1Q8IUC0 172 aa12.5□□□□□ -0.41
ME3-202ENST00000393324 DNAH5Q8TE73 4624 aa12.5□□□□□ -0.41
ME3-202ENST00000393324 F8WEM9 126 aa12.48□□□□□ -0.41
ME3-202ENST00000393324 HAMPP81172 84 aa12.47□□□□□ -0.41
ME3-202ENST00000393324 FAT2Q9NYQ8 4349 aa12.46□□□□□ -0.41
ME3-202ENST00000393324 PSORS1C2Q9UIG4 136 aa12.46□□□□□ -0.42
ME3-202ENST00000393324 A0A1W2PNM2 257 aa12.45□□□□□ -0.42
ME3-202ENST00000393324 PKD1P98161 4303 aa12.44□□□□□ -0.42
ME3-202ENST00000393324 SPRR1BP22528 89 aa12.43□□□□□ -0.42
ME3-202ENST00000393324 Q8NBF4 154 aa12.42□□□□□ -0.42
ME3-202ENST00000393324 FAM30AQ9NZY2 134 aa12.41□□□□□ -0.42
ME3-202ENST00000393324 SACSQ9NZJ4 4579 aa12.41□□□□□ -0.42
ME3-202ENST00000393324 SNURFQ9Y675 71 aa12.41□□□□□ -0.42
ME3-202ENST00000393324 IGLV8-61A0A075B6I0 122 aa12.39□□□□□ -0.43
ME3-202ENST00000393324 A0A1B0GW54 56 aa12.39□□□□□ -0.43
ME3-202ENST00000393324 IGFL1Q6UW32 110 aa12.39□□□□□ -0.43
ME3-202ENST00000393324 NDUFC1O43677 76 aa12.38□□□□□ -0.43
ME3-202ENST00000393324 A0A0G2JQZ4 141 aa12.38□□□□□ -0.43
ME3-202ENST00000393324 NREPQ16612 68 aa12.38□□□□□ -0.43
ME3-202ENST00000393324 SPRR4Q96PI1 79 aa12.38□□□□□ -0.43
ME3-202ENST00000393324 CIRBP-AS1Q8TBR5 109 aa12.37□□□□□ -0.43
ME3-202ENST00000393324 FP248Q71RG6 208 aaPredicted RBP12.36□□□□□ -0.43
ME3-202ENST00000393324 SMIM26A0A096LP01 95 aa12.35□□□□□ -0.43
ME3-202ENST00000393324 KRTAP10-1P60331 282 aa12.35□□□□□ -0.43
ME3-202ENST00000393324 ATP5EP56381 51 aaPredicted RBP12.35□□□□□ -0.43
ME3-202ENST00000393324 ZNF861PO60384 105 aa12.34□□□□□ -0.43
ME3-202ENST00000393324 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
ME3-202ENST00000393324 Q6ZSA8 131 aa12.33□□□□□ -0.44
ME3-202ENST00000393324 LCE6AA0A183 80 aa12.32□□□□□ -0.44
ME3-202ENST00000393324 LINC00336Q6ZUF6 198 aa12.31□□□□□ -0.44
ME3-202ENST00000393324 PRO0628Q9UI54 55 aa12.3□□□□□ -0.44
ME3-202ENST00000393324 ZNF706Q9Y5V0 76 aaPredicted RBP12.29□□□□□ -0.44
ME3-202ENST00000393324 BPY2O14599 106 aa12.28□□□□□ -0.44
ME3-202ENST00000393324 IGLV7-43P04211 117 aa12.28□□□□□ -0.44
ME3-202ENST00000393324 LINC00483Q53H64 154 aa12.27□□□□□ -0.44
ME3-202ENST00000393324 TMEM254Q8TBM7 123 aa12.27□□□□□ -0.44
ME3-202ENST00000393324 IGKV4-1P06312 121 aa12.26□□□□□ -0.45
ME3-202ENST00000393324 IGLV9-49A0A0B4J1Y8 123 aa12.24□□□□□ -0.45
ME3-202ENST00000393324 OCR1Q9BZK8 76 aa12.24□□□□□ -0.45
ME3-202ENST00000393324 A0A087WSZ3 146 aa12.22□□□□□ -0.45
ME3-202ENST00000393324 A0A0U1RQV1 116 aa12.22□□□□□ -0.45
ME3-202ENST00000393324 Q8N9L7 120 aa12.22□□□□□ -0.45
ME3-202ENST00000393324 LRP1BQ9NZR2 4599 aa12.2□□□□□ -0.46
ME3-202ENST00000393324 ANAPC11Q9NYG5 84 aa12.2□□□□□ -0.46
ME3-202ENST00000393324 PKHD1P08F94 4074 aa12.19□□□□□ -0.46
ME3-202ENST00000393324 RPL37AP61513 92 aaKnown RBP12.14□□□□□ -0.47
ME3-202ENST00000393324 MOBPQ13875 183 aa12.14□□□□□ -0.47
ME3-202ENST00000393324 FAM229BQ4G0N7 80 aa12.14□□□□□ -0.47
ME3-202ENST00000393324 DSCR10P59022 87 aa12.12□□□□□ -0.47
ME3-202ENST00000393324 RYR2Q92736 4967 aa12.12□□□□□ -0.47
ME3-202ENST00000393324 DEFB116Q30KQ4 102 aa12.11□□□□□ -0.47
ME3-202ENST00000393324 KMT2CQ8NEZ4 4911 aaKnown RBP12.09□□□□□ -0.47
ME3-202ENST00000393324 VPS13BQ7Z7G8 4022 aa12.09□□□□□ -0.47
ME3-202ENST00000393324 A0A1B0GVY2 172 aa12.07□□□□□ -0.48
ME3-202ENST00000393324 K7EQZ3 153 aa12.06□□□□□ -0.48
ME3-202ENST00000393324 LINC00472Q9H8W2 130 aa12.04□□□□□ -0.48
ME3-202ENST00000393324 DYNC1H1Q14204 4646 aaKnown RBP12.04□□□□□ -0.48
ME3-202ENST00000393324 BRK1Q8WUW1 75 aa12□□□□□ -0.49
ME3-202ENST00000393324 MPLKIPQ8TAP9 179 aa11.99□□□□□ -0.49
ME3-202ENST00000393324 ZCCHC13Q8WW36 166 aaKnown RBP11.98□□□□□ -0.49
ME3-202ENST00000393324 hDV103S1A0JD37 113 aa11.96□□□□□ -0.49
ME3-202ENST00000393324 SSBP3-AS1Q7Z2R9 100 aa11.96□□□□□ -0.49
ME3-202ENST00000393324 A0A087X002 238 aa11.95□□□□□ -0.5
ME3-202ENST00000393324 Q96NJ1 140 aa11.94□□□□□ -0.5
ME3-202ENST00000393324 A8MWP4 228 aa11.93□□□□□ -0.5
ME3-202ENST00000393324 HCG22E2RYF7 251 aa11.92□□□□□ -0.5
ME3-202ENST00000393324 KRTAP1-4P0C5Y4 121 aa11.91□□□□□ -0.5
ME3-202ENST00000393324 PRR15Q8IV56 129 aa11.91□□□□□ -0.5
ME3-202ENST00000393324 SMR3BP02814 79 aaPredicted RBP11.91□□□□□ -0.5
ME3-202ENST00000393324 KRTAP13-2Q52LG2 175 aa11.91□□□□□ -0.5
ME3-202ENST00000393324 APOBP04114 4563 aaKnown RBP11.9□□□□□ -0.51
ME3-202ENST00000393324 CD164Q04900 197 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms