RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 Q6ZVQ6 151 aa9.39□□□□□ -0.91
MKS1-202ENST00000393119 ST20-AS1Q8NBB2 130 aa9.39□□□□□ -0.91
MKS1-202ENST00000393119 PKD1P98161 4303 aa9.39□□□□□ -0.91
MKS1-202ENST00000393119 SPRR1AP35321 89 aa9.38□□□□□ -0.91
MKS1-202ENST00000393119 CXCL6P80162 114 aa9.38□□□□□ -0.91
MKS1-202ENST00000393119 PRLHP81277 87 aa9.38□□□□□ -0.91
MKS1-202ENST00000393119 KRTAP10-2P60368 255 aa9.38□□□□□ -0.91
MKS1-202ENST00000393119 ETDCA0A1B0GVM5 59 aa9.37□□□□□ -0.91
MKS1-202ENST00000393119 TRBV7-6A0A0J9YX20 115 aa9.37□□□□□ -0.91
MKS1-202ENST00000393119 REG3GQ6UW15 175 aa9.37□□□□□ -0.91
MKS1-202ENST00000393119 Q6ZRX8 168 aa9.37□□□□□ -0.91
MKS1-202ENST00000393119 FP248Q71RG6 208 aaPredicted RBP9.37□□□□□ -0.91
MKS1-202ENST00000393119 PRYO14603 147 aa9.36□□□□□ -0.91
MKS1-202ENST00000393119 LAMTOR3Q9UHA4 124 aa9.36□□□□□ -0.91
MKS1-202ENST00000393119 PRO0628Q9UI54 55 aa9.36□□□□□ -0.91
MKS1-202ENST00000393119 KMT2CQ8NEZ4 4911 aaKnown RBP9.35□□□□□ -0.91
MKS1-202ENST00000393119 UBE2BP63146 152 aa9.35□□□□□ -0.91
MKS1-202ENST00000393119 LINC00336Q6ZUF6 198 aa9.35□□□□□ -0.91
MKS1-202ENST00000393119 TRBV7-4A0A0J9YYF1 115 aa9.35□□□□□ -0.91
MKS1-202ENST00000393119 C3orf84H3BNL1 204 aa9.35□□□□□ -0.91
MKS1-202ENST00000393119 PDE6GP18545 87 aa9.35□□□□□ -0.91
MKS1-202ENST00000393119 IGLV5-52A0A0A0MRZ9 124 aa9.34□□□□□ -0.91
MKS1-202ENST00000393119 HAMPP81172 84 aa9.34□□□□□ -0.91
MKS1-202ENST00000393119 SPACA4Q8TDM5 124 aa9.34□□□□□ -0.91
MKS1-202ENST00000393119 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.34□□□□□ -0.91
MKS1-202ENST00000393119 SMIM26A0A096LP01 95 aa9.33□□□□□ -0.92
MKS1-202ENST00000393119 Q8N377 158 aa9.32□□□□□ -0.92
MKS1-202ENST00000393119 H3BQ85 93 aa9.31□□□□□ -0.92
MKS1-202ENST00000393119 SNURFQ9Y675 71 aa9.31□□□□□ -0.92
MKS1-202ENST00000393119 F8WEM9 126 aa9.31□□□□□ -0.92
MKS1-202ENST00000393119 NDUFC1O43677 76 aa9.31□□□□□ -0.92
MKS1-202ENST00000393119 PKHD1P08F94 4074 aa9.31□□□□□ -0.92
MKS1-202ENST00000393119 FAM30AQ9NZY2 134 aa9.3□□□□□ -0.92
MKS1-202ENST00000393119 HIGD2AQ9BW72 106 aa9.3□□□□□ -0.92
MKS1-202ENST00000393119 ATP5EP56381 51 aaPredicted RBP9.29□□□□□ -0.92
MKS1-202ENST00000393119 LRP1BQ9NZR2 4599 aa9.27□□□□□ -0.92
MKS1-202ENST00000393119 A0A0G2JQZ4 141 aa9.27□□□□□ -0.93
MKS1-202ENST00000393119 DHRS4-AS1Q9P1J3 65 aa9.27□□□□□ -0.93
MKS1-202ENST00000393119 LINC00474Q9P2X8 69 aa9.27□□□□□ -0.93
MKS1-202ENST00000393119 RYR2Q92736 4967 aa9.26□□□□□ -0.93
MKS1-202ENST00000393119 NREPQ16612 68 aa9.23□□□□□ -0.93
MKS1-202ENST00000393119 KRTAP10-1P60331 282 aa9.22□□□□□ -0.93
MKS1-202ENST00000393119 TMEM254Q8TBM7 123 aa9.21□□□□□ -0.93
MKS1-202ENST00000393119 UBE2AP49459 152 aa9.21□□□□□ -0.94
MKS1-202ENST00000393119 SMIM29Q86T20 159 aa9.2□□□□□ -0.94
MKS1-202ENST00000393119 PSORS1C2Q9UIG4 136 aa9.2□□□□□ -0.94
MKS1-202ENST00000393119 SCXQ7RTU7 201 aa9.2□□□□□ -0.94
MKS1-202ENST00000393119 OCR1Q9BZK8 76 aa9.2□□□□□ -0.94
MKS1-202ENST00000393119 PLAC8Q9NZF1 115 aa9.2□□□□□ -0.94
MKS1-202ENST00000393119 IGLV5-48A0A075B6I7 105 aa9.19□□□□□ -0.94
MKS1-202ENST00000393119 BPY2O14599 106 aa9.19□□□□□ -0.94
MKS1-202ENST00000393119 A0A0U1RQV1 116 aa9.19□□□□□ -0.94
MKS1-202ENST00000393119 IGKV4-1P06312 121 aa9.19□□□□□ -0.94
MKS1-202ENST00000393119 CIRBP-AS1Q8TBR5 109 aa9.19□□□□□ -0.94
MKS1-202ENST00000393119 PKIGQ9Y2B9 76 aa9.17□□□□□ -0.94
MKS1-202ENST00000393119 FAM229BQ4G0N7 80 aa9.16□□□□□ -0.94
MKS1-202ENST00000393119 KRTAP13-1Q8IUC0 172 aa9.16□□□□□ -0.94
MKS1-202ENST00000393119 DYNC1H1Q14204 4646 aaKnown RBP9.15□□□□□ -0.94
MKS1-202ENST00000393119 C1orf137Q5JT78 98 aa9.15□□□□□ -0.94
MKS1-202ENST00000393119 LCE6AA0A183 80 aa9.15□□□□□ -0.95
MKS1-202ENST00000393119 ANAPC11Q9NYG5 84 aa9.15□□□□□ -0.95
MKS1-202ENST00000393119 RYR3Q15413 4870 aa9.15□□□□□ -0.95
MKS1-202ENST00000393119 BRK1Q8WUW1 75 aa9.13□□□□□ -0.95
MKS1-202ENST00000393119 VPS13BQ7Z7G8 4022 aa9.12□□□□□ -0.95
MKS1-202ENST00000393119 A0A1W2PNM2 257 aa9.12□□□□□ -0.95
MKS1-202ENST00000393119 Q8N9L7 120 aa9.11□□□□□ -0.95
MKS1-202ENST00000393119 H0Y9J4 135 aa9.1□□□□□ -0.95
MKS1-202ENST00000393119 IGFL1Q6UW32 110 aa9.07□□□□□ -0.96
MKS1-202ENST00000393119 MPLKIPQ8TAP9 179 aa9.07□□□□□ -0.96
MKS1-202ENST00000393119 Q6ZSA8 131 aa9.07□□□□□ -0.96
MKS1-202ENST00000393119 C1orf195Q5TG92 126 aa9.06□□□□□ -0.96
MKS1-202ENST00000393119 IGLV9-49A0A0B4J1Y8 123 aa9.04□□□□□ -0.96
MKS1-202ENST00000393119 ZNF861PO60384 105 aa9.04□□□□□ -0.96
MKS1-202ENST00000393119 FAT1Q14517 4588 aa9.03□□□□□ -0.96
MKS1-202ENST00000393119 SPRR4Q96PI1 79 aa9.03□□□□□ -0.96
MKS1-202ENST00000393119 hDV103S1A0JD37 113 aa9.02□□□□□ -0.97
MKS1-202ENST00000393119 IGLV7-43P04211 117 aa9.02□□□□□ -0.97
MKS1-202ENST00000393119 ZCCHC13Q8WW36 166 aaKnown RBP9.02□□□□□ -0.97
MKS1-202ENST00000393119 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.97
MKS1-202ENST00000393119 A0A1B0GW54 56 aa9.01□□□□□ -0.97
MKS1-202ENST00000393119 V9GYY9 64 aa9.01□□□□□ -0.97
MKS1-202ENST00000393119 SPRR1BP22528 89 aa9.01□□□□□ -0.97
MKS1-202ENST00000393119 Q8NBF4 154 aa9.01□□□□□ -0.97
MKS1-202ENST00000393119 A0A1B0GVY2 172 aa8.99□□□□□ -0.97
MKS1-202ENST00000393119 DEFB116Q30KQ4 102 aa8.99□□□□□ -0.97
MKS1-202ENST00000393119 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
MKS1-202ENST00000393119 Q1T7F1 81 aa8.97□□□□□ -0.97
MKS1-202ENST00000393119 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
MKS1-202ENST00000393119 A0A087WSZ3 146 aa8.96□□□□□ -0.98
MKS1-202ENST00000393119 SEC61GP60059 68 aa8.94□□□□□ -0.98
MKS1-202ENST00000393119 PRR15Q8IV56 129 aa8.94□□□□□ -0.98
MKS1-202ENST00000393119 LINC00483Q53H64 154 aa8.94□□□□□ -0.98
MKS1-202ENST00000393119 MOBPQ13875 183 aa8.93□□□□□ -0.98
MKS1-202ENST00000393119 C1orf64Q8NEQ6 169 aa8.93□□□□□ -0.98
MKS1-202ENST00000393119 DSCR10P59022 87 aa8.92□□□□□ -0.98
MKS1-202ENST00000393119 CYP4F30PQ9H0H9 118 aa8.92□□□□□ -0.98
MKS1-202ENST00000393119 A0A087X002 238 aa8.88□□□□□ -0.99
MKS1-202ENST00000393119 RPL37AP61513 92 aaKnown RBP8.87□□□□□ -0.99
MKS1-202ENST00000393119 ZNF706Q9Y5V0 76 aaPredicted RBP8.87□□□□□ -0.99
MKS1-202ENST00000393119 K7EQZ3 153 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 364.1 ms