RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 LINC00476Q8WZB0 136 aa11.32□□□□□ -0.6
ACTN4-202ENST00000390009 DNAH17Q9UFH2 4485 aa11.32□□□□□ -0.6
ACTN4-202ENST00000390009 C1orf137Q5JT78 98 aa11.31□□□□□ -0.6
ACTN4-202ENST00000390009 DNAH6Q9C0G6 4158 aa11.29□□□□□ -0.6
ACTN4-202ENST00000390009 UBE2AP49459 152 aa11.29□□□□□ -0.6
ACTN4-202ENST00000390009 C5orf47Q569G3 176 aa11.29□□□□□ -0.6
ACTN4-202ENST00000390009 IGLV5-52A0A0A0MRZ9 124 aa11.27□□□□□ -0.6
ACTN4-202ENST00000390009 A0A1W2PNM2 257 aa11.27□□□□□ -0.6
ACTN4-202ENST00000390009 C3orf84H3BNL1 204 aa11.27□□□□□ -0.6
ACTN4-202ENST00000390009 BCE1O60756 84 aa11.27□□□□□ -0.6
ACTN4-202ENST00000390009 CXCL6P80162 114 aa11.27□□□□□ -0.6
ACTN4-202ENST00000390009 F8WEM9 126 aa11.27□□□□□ -0.61
ACTN4-202ENST00000390009 OXTP01178 125 aa11.26□□□□□ -0.61
ACTN4-202ENST00000390009 Q8NBF4 154 aa11.25□□□□□ -0.61
ACTN4-202ENST00000390009 A0A1B0GW54 56 aa11.24□□□□□ -0.61
ACTN4-202ENST00000390009 NREPQ16612 68 aa11.23□□□□□ -0.61
ACTN4-202ENST00000390009 KRTAP13-1Q8IUC0 172 aa11.23□□□□□ -0.61
ACTN4-202ENST00000390009 SCXQ7RTU7 201 aa11.23□□□□□ -0.61
ACTN4-202ENST00000390009 SPRR4Q96PI1 79 aa11.21□□□□□ -0.61
ACTN4-202ENST00000390009 PLAC8Q9NZF1 115 aa11.21□□□□□ -0.61
ACTN4-202ENST00000390009 ALMS1Q8TCU4 4167 aa11.21□□□□□ -0.61
ACTN4-202ENST00000390009 SRRM2Q9UQ35 2752 aaKnown RBP11.2□□□□□ -0.62
ACTN4-202ENST00000390009 SPRR1BP22528 89 aa11.2□□□□□ -0.62
ACTN4-202ENST00000390009 IGLV8-61A0A075B6I0 122 aa11.2□□□□□ -0.62
ACTN4-202ENST00000390009 IGFL1Q6UW32 110 aa11.19□□□□□ -0.62
ACTN4-202ENST00000390009 C20orf197Q8N268 126 aa11.18□□□□□ -0.62
ACTN4-202ENST00000390009 A0A0G2JQZ4 141 aa11.17□□□□□ -0.62
ACTN4-202ENST00000390009 FRAS1Q86XX4 4008 aa11.17□□□□□ -0.62
ACTN4-202ENST00000390009 DNAH8Q96JB1 4490 aa11.15□□□□□ -0.62
ACTN4-202ENST00000390009 PSORS1C2Q9UIG4 136 aa11.15□□□□□ -0.62
ACTN4-202ENST00000390009 BPY2O14599 106 aa11.14□□□□□ -0.63
ACTN4-202ENST00000390009 Q5XG85 94 aa11.14□□□□□ -0.63
ACTN4-202ENST00000390009 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
ACTN4-202ENST00000390009 HYDINQ4G0P3 5121 aa11.12□□□□□ -0.63
ACTN4-202ENST00000390009 C4orf26Q17RF5 130 aa11.12□□□□□ -0.63
ACTN4-202ENST00000390009 TRAV7A0A075B6U4 112 aa11.11□□□□□ -0.63
ACTN4-202ENST00000390009 FAM236DA0A1B0GTK5 79 aa11.11□□□□□ -0.63
ACTN4-202ENST00000390009 FAM236CP0DP71 79 aa11.11□□□□□ -0.63
ACTN4-202ENST00000390009 Q8N9L7 120 aa11.11□□□□□ -0.63
ACTN4-202ENST00000390009 DNAH5Q8TE73 4624 aa11.1□□□□□ -0.63
ACTN4-202ENST00000390009 DNAH11Q96DT5 4516 aa11.1□□□□□ -0.63
ACTN4-202ENST00000390009 H7BZZ5 65 aa11.09□□□□□ -0.63
ACTN4-202ENST00000390009 IGKV4-1P06312 121 aa11.09□□□□□ -0.63
ACTN4-202ENST00000390009 HRCT1Q6UXD1 115 aa11.06□□□□□ -0.64
ACTN4-202ENST00000390009 KLKP1Q107X0 134 aa11.06□□□□□ -0.64
ACTN4-202ENST00000390009 A0A087WSZ3 146 aa11.05□□□□□ -0.64
ACTN4-202ENST00000390009 ZNF861PO60384 105 aa11.05□□□□□ -0.64
ACTN4-202ENST00000390009 FAM30AQ9NZY2 134 aa11.05□□□□□ -0.64
ACTN4-202ENST00000390009 LINC00483Q53H64 154 aa11.04□□□□□ -0.64
ACTN4-202ENST00000390009 ZNF706Q9Y5V0 76 aaPredicted RBP11.03□□□□□ -0.64
ACTN4-202ENST00000390009 FAT2Q9NYQ8 4349 aa11.03□□□□□ -0.64
ACTN4-202ENST00000390009 CIRBP-AS1Q8TBR5 109 aa11.03□□□□□ -0.64
ACTN4-202ENST00000390009 SERP1Q9Y6X1 66 aa11.02□□□□□ -0.64
ACTN4-202ENST00000390009 PKD1P98161 4303 aa11.01□□□□□ -0.65
ACTN4-202ENST00000390009 SNURFQ9Y675 71 aa11.01□□□□□ -0.65
ACTN4-202ENST00000390009 IGLV9-49A0A0B4J1Y8 123 aa11□□□□□ -0.65
ACTN4-202ENST00000390009 DSCR10P59022 87 aa11□□□□□ -0.65
ACTN4-202ENST00000390009 IGLV7-43P04211 117 aa10.99□□□□□ -0.65
ACTN4-202ENST00000390009 KRTAP10-1P60331 282 aa10.98□□□□□ -0.65
ACTN4-202ENST00000390009 Q6ZSA8 131 aa10.98□□□□□ -0.65
ACTN4-202ENST00000390009 K7EQZ3 153 aa10.96□□□□□ -0.66
ACTN4-202ENST00000390009 DEFB116Q30KQ4 102 aa10.96□□□□□ -0.66
ACTN4-202ENST00000390009 ANAPC11Q9NYG5 84 aa10.94□□□□□ -0.66
ACTN4-202ENST00000390009 RPL37AP61513 92 aaKnown RBP10.93□□□□□ -0.66
ACTN4-202ENST00000390009 SACSQ9NZJ4 4579 aa10.92□□□□□ -0.66
ACTN4-202ENST00000390009 NDUFC1O43677 76 aa10.91□□□□□ -0.66
ACTN4-202ENST00000390009 MOBPQ13875 183 aa10.91□□□□□ -0.66
ACTN4-202ENST00000390009 LINC00472Q9H8W2 130 aa10.88□□□□□ -0.67
ACTN4-202ENST00000390009 SMIM26A0A096LP01 95 aa10.87□□□□□ -0.67
ACTN4-202ENST00000390009 FP248Q71RG6 208 aaPredicted RBP10.87□□□□□ -0.67
ACTN4-202ENST00000390009 TMEM254Q8TBM7 123 aa10.86□□□□□ -0.67
ACTN4-202ENST00000390009 OCR1Q9BZK8 76 aa10.86□□□□□ -0.67
ACTN4-202ENST00000390009 ATP5EP56381 51 aaPredicted RBP10.85□□□□□ -0.67
ACTN4-202ENST00000390009 LCE6AA0A183 80 aa10.84□□□□□ -0.67
ACTN4-202ENST00000390009 LRP1BQ9NZR2 4599 aa10.84□□□□□ -0.67
ACTN4-202ENST00000390009 HCG22E2RYF7 251 aa10.84□□□□□ -0.67
ACTN4-202ENST00000390009 LINC00336Q6ZUF6 198 aa10.83□□□□□ -0.68
ACTN4-202ENST00000390009 A8MWP4 228 aa10.81□□□□□ -0.68
ACTN4-202ENST00000390009 PRR15Q8IV56 129 aa10.79□□□□□ -0.68
ACTN4-202ENST00000390009 PRO0628Q9UI54 55 aa10.79□□□□□ -0.68
ACTN4-202ENST00000390009 Q96NJ1 140 aa10.79□□□□□ -0.68
ACTN4-202ENST00000390009 WFDC13Q8IUB5 93 aa10.77□□□□□ -0.69
ACTN4-202ENST00000390009 PKHD1P08F94 4074 aa10.77□□□□□ -0.69
ACTN4-202ENST00000390009 A0A0U1RQV1 116 aa10.76□□□□□ -0.69
ACTN4-202ENST00000390009 VPS13BQ7Z7G8 4022 aa10.73□□□□□ -0.69
ACTN4-202ENST00000390009 KRTAP29-1A8MX34 341 aaPredicted RBP10.72□□□□□ -0.69
ACTN4-202ENST00000390009 SSBP3-AS1Q7Z2R9 100 aa10.72□□□□□ -0.69
ACTN4-202ENST00000390009 NDUFB1O75438 58 aa10.71□□□□□ -0.69
ACTN4-202ENST00000390009 FAM229BQ4G0N7 80 aa10.71□□□□□ -0.69
ACTN4-202ENST00000390009 CASC2Q6XLA1 102 aa10.7□□□□□ -0.7
ACTN4-202ENST00000390009 A0A087X002 238 aa10.7□□□□□ -0.7
ACTN4-202ENST00000390009 CD164Q04900 197 aa10.69□□□□□ -0.7
ACTN4-202ENST00000390009 A0A1B0GVY2 172 aa10.68□□□□□ -0.7
ACTN4-202ENST00000390009 KRTAP13-2Q52LG2 175 aa10.67□□□□□ -0.7
ACTN4-202ENST00000390009 MMP24-AS1A0A0U1RRL7 71 aa10.66□□□□□ -0.7
ACTN4-202ENST00000390009 KRTAP1-4P0C5Y4 121 aa10.65□□□□□ -0.7
ACTN4-202ENST00000390009 RYR2Q92736 4967 aa10.64□□□□□ -0.71
ACTN4-202ENST00000390009 MPLKIPQ8TAP9 179 aa10.64□□□□□ -0.71
ACTN4-202ENST00000390009 DYNC1H1Q14204 4646 aaKnown RBP10.64□□□□□ -0.71
ACTN4-202ENST00000390009 CDK2AP2O75956 126 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms