RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SERTAD4-AS1Q5TG53 156 aa12.35□□□□□ -0.43
CSPG5-202ENST00000383738 TRBV7-4A0A0J9YYF1 115 aa12.34□□□□□ -0.43
CSPG5-202ENST00000383738 C15orf56Q8N910 161 aa12.34□□□□□ -0.43
CSPG5-202ENST00000383738 WWC2-AS2Q96NR7 200 aa12.34□□□□□ -0.43
CSPG5-202ENST00000383738 SPAG11AQ6PDA7 123 aa12.32□□□□□ -0.44
CSPG5-202ENST00000383738 Q9BRP9 147 aa12.32□□□□□ -0.44
CSPG5-202ENST00000383738 WIPF1O43516 503 aa12.3□□□□□ -0.44
CSPG5-202ENST00000383738 Q8NBF4 154 aa12.3□□□□□ -0.44
CSPG5-202ENST00000383738 DMBT1Q9UGM3 2413 aaPredicted RBP12.29□□□□□ -0.44
CSPG5-202ENST00000383738 RTL8CO15255 209 aa12.29□□□□□ -0.44
CSPG5-202ENST00000383738 LINC00528Q8N1L1 170 aa12.29□□□□□ -0.44
CSPG5-202ENST00000383738 BSNQ9UPA5 3926 aa12.28□□□□□ -0.44
CSPG5-202ENST00000383738 IGHV6-1A0A0B4J1U7 121 aa12.28□□□□□ -0.44
CSPG5-202ENST00000383738 RETNLBQ9BQ08 111 aa12.28□□□□□ -0.44
CSPG5-202ENST00000383738 GVQW2A0A096LPI5 108 aaPredicted RBP12.28□□□□□ -0.44
CSPG5-202ENST00000383738 LINC00476Q8WZB0 136 aa12.27□□□□□ -0.44
CSPG5-202ENST00000383738 Q8N377 158 aa12.27□□□□□ -0.45
CSPG5-202ENST00000383738 TRAV22A0A0B4J277 110 aa12.26□□□□□ -0.45
CSPG5-202ENST00000383738 Q6ZRX8 168 aa12.23□□□□□ -0.45
CSPG5-202ENST00000383738 TGP01266 2768 aa12.22□□□□□ -0.45
CSPG5-202ENST00000383738 APLNQ9ULZ1 77 aa12.21□□□□□ -0.45
CSPG5-202ENST00000383738 A0A1W2PNM2 257 aa12.19□□□□□ -0.46
CSPG5-202ENST00000383738 C16orf90A8MZG2 172 aa12.18□□□□□ -0.46
CSPG5-202ENST00000383738 OCR1Q9BZK8 76 aa12.18□□□□□ -0.46
CSPG5-202ENST00000383738 ERC2-IT1O76042 136 aa12.17□□□□□ -0.46
CSPG5-202ENST00000383738 hDV103S1A0JD37 113 aa12.17□□□□□ -0.46
CSPG5-202ENST00000383738 EPM2AB3EWF7 344 aa12.17□□□□□ -0.46
CSPG5-202ENST00000383738 TENM2Q9NT68 2774 aa12.16□□□□□ -0.46
CSPG5-202ENST00000383738 SMR3BP02814 79 aaPredicted RBP12.15□□□□□ -0.46
CSPG5-202ENST00000383738 ZNF706Q9Y5V0 76 aaPredicted RBP12.15□□□□□ -0.46
CSPG5-202ENST00000383738 F8WDY8 70 aa12.15□□□□□ -0.47
CSPG5-202ENST00000383738 ANAPC11Q9NYG5 84 aa12.14□□□□□ -0.47
CSPG5-202ENST00000383738 MOBPQ13875 183 aa12.14□□□□□ -0.47
CSPG5-202ENST00000383738 LIMD2Q9BT23 127 aa12.13□□□□□ -0.47
CSPG5-202ENST00000383738 A0A087WTM6 91 aa12.11□□□□□ -0.47
CSPG5-202ENST00000383738 KCNQ1DNQ9H478 68 aa12.06□□□□□ -0.48
CSPG5-202ENST00000383738 KRTAP1-5Q9BYS1 174 aa12.06□□□□□ -0.48
CSPG5-202ENST00000383738 TNP2Q05952 138 aa12.06□□□□□ -0.48
CSPG5-202ENST00000383738 IGFL1Q6UW32 110 aa12.06□□□□□ -0.48
CSPG5-202ENST00000383738 SPINK1P00995 79 aa12.05□□□□□ -0.48
CSPG5-202ENST00000383738 C9orf163Q8N9P6 203 aa12.04□□□□□ -0.48
CSPG5-202ENST00000383738 IGLV1-50A0A075B6I6 118 aa12.04□□□□□ -0.48
CSPG5-202ENST00000383738 COA5Q86WW8 74 aa12.03□□□□□ -0.48
CSPG5-202ENST00000383738 SPACA4Q8TDM5 124 aa12.03□□□□□ -0.48
CSPG5-202ENST00000383738 IGLV8-61A0A075B6I0 122 aa12.01□□□□□ -0.49
CSPG5-202ENST00000383738 DSCR10P59022 87 aa12□□□□□ -0.49
CSPG5-202ENST00000383738 SRRM2Q9UQ35 2752 aaKnown RBP11.98□□□□□ -0.49
CSPG5-202ENST00000383738 FLG2Q5D862 2391 aaPredicted RBP11.97□□□□□ -0.49
CSPG5-202ENST00000383738 VPS13CQ709C8 3753 aa11.96□□□□□ -0.5
CSPG5-202ENST00000383738 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.92□□□□□ -0.5
CSPG5-202ENST00000383738 IGLV5-48A0A075B6I7 105 aa11.91□□□□□ -0.5
CSPG5-202ENST00000383738 TRRAPQ9Y4A5 3859 aa11.91□□□□□ -0.5
CSPG5-202ENST00000383738 PRR15Q8IV56 129 aa11.89□□□□□ -0.51
CSPG5-202ENST00000383738 PSORS1C2Q9UIG4 136 aa11.89□□□□□ -0.51
CSPG5-202ENST00000383738 CD164Q04900 197 aa11.88□□□□□ -0.51
CSPG5-202ENST00000383738 A0A1B0GW54 56 aa11.87□□□□□ -0.51
CSPG5-202ENST00000383738 A8MWP4 228 aa11.86□□□□□ -0.51
CSPG5-202ENST00000383738 PLA2G1BP04054 148 aaKnown RBP11.86□□□□□ -0.51
CSPG5-202ENST00000383738 LOC101927531A0A1B0GV80 90 aa11.86□□□□□ -0.51
CSPG5-202ENST00000383738 A8MU10 97 aa11.86□□□□□ -0.51
CSPG5-202ENST00000383738 Q1T7F1 81 aa11.85□□□□□ -0.51
CSPG5-202ENST00000383738 IGKV2D-30A0A075B6S6 120 aa11.85□□□□□ -0.51
CSPG5-202ENST00000383738 IGKV2-30P06310 120 aa11.85□□□□□ -0.51
CSPG5-202ENST00000383738 PRR26Q8N8Z3 221 aa11.83□□□□□ -0.52
CSPG5-202ENST00000383738 KTN1-AS1Q86SY8 53 aa11.82□□□□□ -0.52
CSPG5-202ENST00000383738 A0A1B0GU69 56 aa11.82□□□□□ -0.52
CSPG5-202ENST00000383738 TLX1NBP0CAT3 122 aa11.82□□□□□ -0.52
CSPG5-202ENST00000383738 CNBPP62633 177 aaKnown RBP11.82□□□□□ -0.52
CSPG5-202ENST00000383738 TYMSOSQ8TAI1 123 aa11.81□□□□□ -0.52
CSPG5-202ENST00000383738 ATP11AUNQ6ZP68 121 aa11.79□□□□□ -0.52
CSPG5-202ENST00000383738 FAM229AH3BQW9 127 aa11.77□□□□□ -0.52
CSPG5-202ENST00000383738 RBM12B-AS1Q9P1G2 102 aa11.77□□□□□ -0.53
CSPG5-202ENST00000383738 ZNF861PO60384 105 aa11.77□□□□□ -0.53
CSPG5-202ENST00000383738 Q8N9P0 234 aaPredicted RBP11.76□□□□□ -0.53
CSPG5-202ENST00000383738 KRTAP26-1Q6PEX3 210 aa11.76□□□□□ -0.53
CSPG5-202ENST00000383738 H3BPC8 53 aa11.75□□□□□ -0.53
CSPG5-202ENST00000383738 Q5VV11 94 aa11.75□□□□□ -0.53
CSPG5-202ENST00000383738 CYP4F30PQ9H0H9 118 aa11.75□□□□□ -0.53
CSPG5-202ENST00000383738 TP53AIP1Q9HCN2 124 aa11.73□□□□□ -0.53
CSPG5-202ENST00000383738 SPRR4Q96PI1 79 aa11.72□□□□□ -0.53
CSPG5-202ENST00000383738 PRAC1Q96KF2 57 aa11.71□□□□□ -0.53
CSPG5-202ENST00000383738 PANO1I0J062 215 aa11.69□□□□□ -0.54
CSPG5-202ENST00000383738 ACYP2P14621 99 aa11.69□□□□□ -0.54
CSPG5-202ENST00000383738 C8orf17Q9NRJ1 99 aa11.68□□□□□ -0.54
CSPG5-202ENST00000383738 IGLV7-43P04211 117 aa11.67□□□□□ -0.54
CSPG5-202ENST00000383738 C7orf65Q6ZTY9 151 aa11.66□□□□□ -0.54
CSPG5-202ENST00000383738 MRPL34Q9BQ48 92 aaKnown RBP11.66□□□□□ -0.54
CSPG5-202ENST00000383738 PLA2G2DQ9UNK4 145 aa11.66□□□□□ -0.54
CSPG5-202ENST00000383738 KRTAP10-2P60368 255 aa11.65□□□□□ -0.54
CSPG5-202ENST00000383738 ZNF469Q96JG9 3925 aaPredicted RBP11.63□□□□□ -0.55
CSPG5-202ENST00000383738 C8orf87E5RJ46 101 aa11.61□□□□□ -0.55
CSPG5-202ENST00000383738 CDC42SE1Q9NRR8 79 aa11.6□□□□□ -0.55
CSPG5-202ENST00000383738 SPINK7P58062 85 aa11.6□□□□□ -0.55
CSPG5-202ENST00000383738 SPANXA2-OT1Q8N9U9 137 aa11.6□□□□□ -0.55
CSPG5-202ENST00000383738 A0A1B0GVX0 72 aa11.55□□□□□ -0.56
CSPG5-202ENST00000383738 C9orf92A6NGG3 77 aa11.55□□□□□ -0.56
CSPG5-202ENST00000383738 LCA10Q71F78 164 aa11.53□□□□□ -0.56
CSPG5-202ENST00000383738 Q96NJ1 140 aa11.53□□□□□ -0.56
CSPG5-202ENST00000383738 IGLV5-37A0A075B6J1 123 aa11.53□□□□□ -0.56
CSPG5-202ENST00000383738 LINC00313P59037 77 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms