RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 OBSCN-AS1Q96MR7 158 aa4.89□□□□□ -1.63
ERCC8-202ENST00000381118 ZNF861PO60384 105 aa4.88□□□□□ -1.63
ERCC8-202ENST00000381118 SMR3BP02814 79 aaPredicted RBP4.88□□□□□ -1.63
ERCC8-202ENST00000381118 IGLV7-43P04211 117 aa4.88□□□□□ -1.63
ERCC8-202ENST00000381118 XGP55808 180 aa4.88□□□□□ -1.63
ERCC8-202ENST00000381118 DSCR8Q96T75 97 aa4.87□□□□□ -1.63
ERCC8-202ENST00000381118 FAT1Q14517 4588 aa4.87□□□□□ -1.63
ERCC8-202ENST00000381118 SMIM29Q86T20 159 aa4.86□□□□□ -1.63
ERCC8-202ENST00000381118 VPS25Q9BRG1 176 aa4.86□□□□□ -1.63
ERCC8-202ENST00000381118 EPPK1P58107 5090 aaKnown RBP4.85□□□□□ -1.63
ERCC8-202ENST00000381118 ANAPC11Q9NYG5 84 aa4.85□□□□□ -1.63
ERCC8-202ENST00000381118 A0A0G2JQZ4 141 aa4.84□□□□□ -1.63
ERCC8-202ENST00000381118 F8WEM9 126 aa4.84□□□□□ -1.63
ERCC8-202ENST00000381118 Q6ZQT0 140 aa4.84□□□□□ -1.63
ERCC8-202ENST00000381118 SPRR4Q96PI1 79 aa4.84□□□□□ -1.63
ERCC8-202ENST00000381118 TRBV7-4A0A0J9YYF1 115 aa4.83□□□□□ -1.64
ERCC8-202ENST00000381118 CCKP06307 115 aa4.83□□□□□ -1.64
ERCC8-202ENST00000381118 LOC110117498A0A087WWA1 95 aa4.82□□□□□ -1.64
ERCC8-202ENST00000381118 IGLV9-49A0A0B4J1Y8 123 aa4.82□□□□□ -1.64
ERCC8-202ENST00000381118 RPL37AP61513 92 aaKnown RBP4.82□□□□□ -1.64
ERCC8-202ENST00000381118 SPRR1BP22528 89 aa4.82□□□□□ -1.64
ERCC8-202ENST00000381118 LORP23490 312 aaPredicted RBP4.82□□□□□ -1.64
ERCC8-202ENST00000381118 ZNF706Q9Y5V0 76 aaPredicted RBP4.82□□□□□ -1.64
ERCC8-202ENST00000381118 CDIP1Q9H305 208 aa4.81□□□□□ -1.64
ERCC8-202ENST00000381118 HSPG2P98160 4391 aa4.81□□□□□ -1.64
ERCC8-202ENST00000381118 FAM240AA0A1B0GVK7 77 aa4.81□□□□□ -1.64
ERCC8-202ENST00000381118 C9orf153Q5TBE3 101 aa4.81□□□□□ -1.64
ERCC8-202ENST00000381118 IGFL1Q6UW32 110 aa4.8□□□□□ -1.64
ERCC8-202ENST00000381118 LINC00846Q9NV44 126 aa4.8□□□□□ -1.64
ERCC8-202ENST00000381118 ACYP1P07311 99 aa4.8□□□□□ -1.64
ERCC8-202ENST00000381118 PDE6GP18545 87 aa4.8□□□□□ -1.64
ERCC8-202ENST00000381118 LINC00483Q53H64 154 aa4.8□□□□□ -1.64
ERCC8-202ENST00000381118 RYR1P21817 5038 aa4.79□□□□□ -1.64
ERCC8-202ENST00000381118 A0A1W2PNM2 257 aa4.78□□□□□ -1.64
ERCC8-202ENST00000381118 MOBPQ13875 183 aa4.78□□□□□ -1.64
ERCC8-202ENST00000381118 IGLV8-61A0A075B6I0 122 aa4.77□□□□□ -1.65
ERCC8-202ENST00000381118 KIAA1109Q2LD37 5005 aa4.77□□□□□ -1.65
ERCC8-202ENST00000381118 Q8NBF4 154 aa4.77□□□□□ -1.65
ERCC8-202ENST00000381118 HRCT1Q6UXD1 115 aa4.76□□□□□ -1.65
ERCC8-202ENST00000381118 A0A087X002 238 aa4.76□□□□□ -1.65
ERCC8-202ENST00000381118 MT-ATP8P03928 68 aa4.76□□□□□ -1.65
ERCC8-202ENST00000381118 Q6JHZ5 121 aa4.75□□□□□ -1.65
ERCC8-202ENST00000381118 UBL5Q9BZL1 73 aa4.75□□□□□ -1.65
ERCC8-202ENST00000381118 CDK2AP2O75956 126 aa4.74□□□□□ -1.65
ERCC8-202ENST00000381118 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
ERCC8-202ENST00000381118 KRTAP10-4P60372 401 aaPredicted RBP4.74□□□□□ -1.65
ERCC8-202ENST00000381118 SPINK6Q6UWN8 80 aa4.74□□□□□ -1.65
ERCC8-202ENST00000381118 A0A087WSZ3 146 aa4.74□□□□□ -1.65
ERCC8-202ENST00000381118 PLA2G1BP04054 148 aaKnown RBP4.74□□□□□ -1.65
ERCC8-202ENST00000381118 Q6ZVQ6 151 aa4.74□□□□□ -1.65
ERCC8-202ENST00000381118 SIGMAR1Q99720 223 aa4.74□□□□□ -1.65
ERCC8-202ENST00000381118 FAM229AH3BQW9 127 aa4.73□□□□□ -1.65
ERCC8-202ENST00000381118 CRYGAP11844 174 aa4.73□□□□□ -1.65
ERCC8-202ENST00000381118 Q5VSD8 79 aa4.73□□□□□ -1.65
ERCC8-202ENST00000381118 IGKV3D-7A0A0C4DH55 119 aa4.73□□□□□ -1.65
ERCC8-202ENST00000381118 C21orf62-AS1Q17RA5 79 aa4.73□□□□□ -1.65
ERCC8-202ENST00000381118 LINC00643Q86TS7 51 aa4.73□□□□□ -1.65
ERCC8-202ENST00000381118 NREPQ16612 68 aa4.72□□□□□ -1.65
ERCC8-202ENST00000381118 KRTAP13-2Q52LG2 175 aa4.72□□□□□ -1.65
ERCC8-202ENST00000381118 PKHD1L1Q86WI1 4243 aa4.71□□□□□ -1.66
ERCC8-202ENST00000381118 FAM229BQ4G0N7 80 aa4.7□□□□□ -1.66
ERCC8-202ENST00000381118 DEFB116Q30KQ4 102 aa4.7□□□□□ -1.66
ERCC8-202ENST00000381118 KRTAP17-1Q9BYP8 105 aa4.7□□□□□ -1.66
ERCC8-202ENST00000381118 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
ERCC8-202ENST00000381118 A0A1B0GW54 56 aa4.69□□□□□ -1.66
ERCC8-202ENST00000381118 Q6Q795 121 aa4.69□□□□□ -1.66
ERCC8-202ENST00000381118 PRR26Q8N8Z3 221 aa4.69□□□□□ -1.66
ERCC8-202ENST00000381118 LRP1Q07954 4544 aaKnown RBP4.69□□□□□ -1.66
ERCC8-202ENST00000381118 SSBP3-AS1Q7Z2R9 100 aa4.69□□□□□ -1.66
ERCC8-202ENST00000381118 TYMSOSQ8TAI1 123 aa4.69□□□□□ -1.66
ERCC8-202ENST00000381118 HIST1H4AP62805 103 aaKnown RBP4.68□□□□□ -1.66
ERCC8-202ENST00000381118 BPY2O14599 106 aa4.67□□□□□ -1.66
ERCC8-202ENST00000381118 Q8N9L7 120 aa4.67□□□□□ -1.66
ERCC8-202ENST00000381118 A0A087WVE0 104 aa4.66□□□□□ -1.66
ERCC8-202ENST00000381118 ATP5EP2Q5VTU8 51 aa4.66□□□□□ -1.66
ERCC8-202ENST00000381118 CXCL6P80162 114 aa4.65□□□□□ -1.66
ERCC8-202ENST00000381118 Q8N1X5 172 aa4.65□□□□□ -1.66
ERCC8-202ENST00000381118 MYCBP2O75592 4640 aa4.65□□□□□ -1.67
ERCC8-202ENST00000381118 FLG2Q5D862 2391 aaPredicted RBP4.65□□□□□ -1.67
ERCC8-202ENST00000381118 FAT3Q8TDW7 4589 aa4.64□□□□□ -1.67
ERCC8-202ENST00000381118 CD164Q04900 197 aa4.64□□□□□ -1.67
ERCC8-202ENST00000381118 SS18L2Q9UHA2 77 aa4.64□□□□□ -1.67
ERCC8-202ENST00000381118 TNXBP22105 4242 aa4.63□□□□□ -1.67
ERCC8-202ENST00000381118 DSCR10P59022 87 aa4.63□□□□□ -1.67
ERCC8-202ENST00000381118 IMUPQ9GZP8 106 aa4.63□□□□□ -1.67
ERCC8-202ENST00000381118 LINC00472Q9H8W2 130 aa4.63□□□□□ -1.67
ERCC8-202ENST00000381118 BIRC6Q9NR09 4857 aa4.63□□□□□ -1.67
ERCC8-202ENST00000381118 K7EQZ3 153 aa4.62□□□□□ -1.67
ERCC8-202ENST00000381118 Q96NJ1 140 aa4.62□□□□□ -1.67
ERCC8-202ENST00000381118 FAM236AA0A1B0GUQ0 79 aa4.62□□□□□ -1.67
ERCC8-202ENST00000381118 FAM236BA0A1B0GV22 79 aa4.62□□□□□ -1.67
ERCC8-202ENST00000381118 IGKV4-1P06312 121 aa4.62□□□□□ -1.67
ERCC8-202ENST00000381118 LINC00304Q8N9R0 145 aa4.62□□□□□ -1.67
ERCC8-202ENST00000381118 SPINK1P00995 79 aa4.6□□□□□ -1.67
ERCC8-202ENST00000381118 KRTAP4-5Q9BYR2 181 aa4.6□□□□□ -1.67
ERCC8-202ENST00000381118 LIMD2Q9BT23 127 aa4.59□□□□□ -1.67
ERCC8-202ENST00000381118 A8MWP4 228 aa4.58□□□□□ -1.68
ERCC8-202ENST00000381118 SCGB1A1P11684 91 aa4.58□□□□□ -1.68
ERCC8-202ENST00000381118 J3KT08 172 aa4.57□□□□□ -1.68
ERCC8-202ENST00000381118 ABCA13Q86UQ4 5058 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms