RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 C9orf163Q8N9P6 203 aa4.88□□□□□ -1.63
CDKL5-202ENST00000379996 DSCR8Q96T75 97 aa4.88□□□□□ -1.63
CDKL5-202ENST00000379996 Q9BRP9 147 aa4.88□□□□□ -1.63
CDKL5-202ENST00000379996 KMT2CQ8NEZ4 4911 aaKnown RBP4.88□□□□□ -1.63
CDKL5-202ENST00000379996 LOC107984640A0A0U1RRK4 108 aa4.88□□□□□ -1.63
CDKL5-202ENST00000379996 C7orf33Q8WU49 177 aa4.87□□□□□ -1.63
CDKL5-202ENST00000379996 LAMTOR3Q9UHA4 124 aa4.87□□□□□ -1.63
CDKL5-202ENST00000379996 KLKP1Q107X0 134 aa4.87□□□□□ -1.63
CDKL5-202ENST00000379996 IGLV1-50A0A075B6I6 118 aa4.86□□□□□ -1.63
CDKL5-202ENST00000379996 TRAV7A0A075B6U4 112 aa4.86□□□□□ -1.63
CDKL5-202ENST00000379996 H7BZZ5 65 aa4.86□□□□□ -1.63
CDKL5-202ENST00000379996 IGKV4-1P06312 121 aa4.86□□□□□ -1.63
CDKL5-202ENST00000379996 J3KT08 172 aa4.85□□□□□ -1.63
CDKL5-202ENST00000379996 SEC61BP60468 96 aaKnown RBP4.85□□□□□ -1.63
CDKL5-202ENST00000379996 C16orf90A8MZG2 172 aa4.85□□□□□ -1.63
CDKL5-202ENST00000379996 Q6ZRX8 168 aa4.85□□□□□ -1.63
CDKL5-202ENST00000379996 DNAH5Q8TE73 4624 aa4.85□□□□□ -1.63
CDKL5-202ENST00000379996 FAM168BA1KXE4 195 aa4.85□□□□□ -1.63
CDKL5-202ENST00000379996 Q75L30 129 aa4.85□□□□□ -1.63
CDKL5-202ENST00000379996 LINC00474Q9P2X8 69 aa4.85□□□□□ -1.63
CDKL5-202ENST00000379996 Q5XG85 94 aa4.84□□□□□ -1.64
CDKL5-202ENST00000379996 Q6ZSA8 131 aa4.83□□□□□ -1.64
CDKL5-202ENST00000379996 FAM19A5Q7Z5A7 132 aaPredicted RBP4.83□□□□□ -1.64
CDKL5-202ENST00000379996 IGLV5-52A0A0A0MRZ9 124 aa4.82□□□□□ -1.64
CDKL5-202ENST00000379996 A0A1W2PNM2 257 aa4.82□□□□□ -1.64
CDKL5-202ENST00000379996 KRTAP10-2P60368 255 aa4.82□□□□□ -1.64
CDKL5-202ENST00000379996 SPRR4Q96PI1 79 aa4.82□□□□□ -1.64
CDKL5-202ENST00000379996 RYR3Q15413 4870 aa4.82□□□□□ -1.64
CDKL5-202ENST00000379996 SMIM29Q86T20 159 aa4.82□□□□□ -1.64
CDKL5-202ENST00000379996 A0A1B0GW54 56 aa4.82□□□□□ -1.64
CDKL5-202ENST00000379996 ERC2-IT1O76042 136 aa4.82□□□□□ -1.64
CDKL5-202ENST00000379996 SPACA4Q8TDM5 124 aa4.82□□□□□ -1.64
CDKL5-202ENST00000379996 OCR1Q9BZK8 76 aa4.82□□□□□ -1.64
CDKL5-202ENST00000379996 DHRS4-AS1Q9P1J3 65 aa4.81□□□□□ -1.64
CDKL5-202ENST00000379996 DYNC1H1Q14204 4646 aaKnown RBP4.81□□□□□ -1.64
CDKL5-202ENST00000379996 HAMPP81172 84 aa4.8□□□□□ -1.64
CDKL5-202ENST00000379996 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.79□□□□□ -1.64
CDKL5-202ENST00000379996 A0A096LNI7 61 aa4.79□□□□□ -1.64
CDKL5-202ENST00000379996 SCXQ7RTU7 201 aa4.79□□□□□ -1.64
CDKL5-202ENST00000379996 C20orf197Q8N268 126 aa4.79□□□□□ -1.64
CDKL5-202ENST00000379996 ST20-AS1Q8NBB2 130 aa4.79□□□□□ -1.64
CDKL5-202ENST00000379996 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
CDKL5-202ENST00000379996 PLAC8Q9NZF1 115 aa4.79□□□□□ -1.64
CDKL5-202ENST00000379996 IGLV8-61A0A075B6I0 122 aa4.78□□□□□ -1.64
CDKL5-202ENST00000379996 BPY2O14599 106 aa4.78□□□□□ -1.64
CDKL5-202ENST00000379996 NKAPP1Q8N9T2 125 aa4.78□□□□□ -1.64
CDKL5-202ENST00000379996 A0A0U1RQV1 116 aa4.78□□□□□ -1.64
CDKL5-202ENST00000379996 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
CDKL5-202ENST00000379996 MRPL55Q7Z7F7 128 aaKnown RBP4.78□□□□□ -1.64
CDKL5-202ENST00000379996 Q8N9L7 120 aa4.78□□□□□ -1.64
CDKL5-202ENST00000379996 Q8NBF4 154 aa4.77□□□□□ -1.65
CDKL5-202ENST00000379996 DSCR10P59022 87 aa4.77□□□□□ -1.65
CDKL5-202ENST00000379996 NREPQ16612 68 aa4.77□□□□□ -1.65
CDKL5-202ENST00000379996 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
CDKL5-202ENST00000379996 FAM236DA0A1B0GTK5 79 aa4.76□□□□□ -1.65
CDKL5-202ENST00000379996 FAM236CP0DP71 79 aa4.76□□□□□ -1.65
CDKL5-202ENST00000379996 KRTAP11-1Q8IUC1 163 aa4.76□□□□□ -1.65
CDKL5-202ENST00000379996 KRTAP10-1P60331 282 aa4.76□□□□□ -1.65
CDKL5-202ENST00000379996 C5orf47Q569G3 176 aa4.76□□□□□ -1.65
CDKL5-202ENST00000379996 ZCCHC13Q8WW36 166 aaKnown RBP4.75□□□□□ -1.65
CDKL5-202ENST00000379996 A0A1W2PNN7 141 aa4.74□□□□□ -1.65
CDKL5-202ENST00000379996 PANO1I0J062 215 aa4.74□□□□□ -1.65
CDKL5-202ENST00000379996 C1orf137Q5JT78 98 aa4.74□□□□□ -1.65
CDKL5-202ENST00000379996 SNURFQ9Y675 71 aa4.74□□□□□ -1.65
CDKL5-202ENST00000379996 SERP1Q9Y6X1 66 aa4.74□□□□□ -1.65
CDKL5-202ENST00000379996 REG3GQ6UW15 175 aa4.74□□□□□ -1.65
CDKL5-202ENST00000379996 TMEM254Q8TBM7 123 aa4.74□□□□□ -1.65
CDKL5-202ENST00000379996 F8WEM9 126 aa4.73□□□□□ -1.65
CDKL5-202ENST00000379996 NDUFC1O43677 76 aa4.73□□□□□ -1.65
CDKL5-202ENST00000379996 LRP1BQ9NZR2 4599 aa4.73□□□□□ -1.65
CDKL5-202ENST00000379996 FP248Q71RG6 208 aaPredicted RBP4.73□□□□□ -1.65
CDKL5-202ENST00000379996 DEFB105AQ8NG35 78 aa4.73□□□□□ -1.65
CDKL5-202ENST00000379996 PKHD1P08F94 4074 aa4.72□□□□□ -1.65
CDKL5-202ENST00000379996 SPRR1BP22528 89 aa4.72□□□□□ -1.65
CDKL5-202ENST00000379996 CDK2AP2O75956 126 aa4.72□□□□□ -1.65
CDKL5-202ENST00000379996 CHTF8P0CG12 524 aa4.72□□□□□ -1.65
CDKL5-202ENST00000379996 KRTAP13-1Q8IUC0 172 aa4.72□□□□□ -1.65
CDKL5-202ENST00000379996 SRRM2Q9UQ35 2752 aaKnown RBP4.72□□□□□ -1.65
CDKL5-202ENST00000379996 ETDCA0A1B0GVM5 59 aa4.72□□□□□ -1.65
CDKL5-202ENST00000379996 IGFL1Q6UW32 110 aa4.72□□□□□ -1.65
CDKL5-202ENST00000379996 APOBP04114 4563 aaKnown RBP4.72□□□□□ -1.65
CDKL5-202ENST00000379996 H0Y9J4 135 aa4.71□□□□□ -1.65
CDKL5-202ENST00000379996 C4orf26Q17RF5 130 aa4.71□□□□□ -1.65
CDKL5-202ENST00000379996 IGLV9-49A0A0B4J1Y8 123 aa4.71□□□□□ -1.66
CDKL5-202ENST00000379996 IGKV2-24A0A0C4DH68 120 aa4.71□□□□□ -1.66
CDKL5-202ENST00000379996 K7EQZ3 153 aa4.71□□□□□ -1.66
CDKL5-202ENST00000379996 ATP5EP56381 51 aaPredicted RBP4.7□□□□□ -1.66
CDKL5-202ENST00000379996 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
CDKL5-202ENST00000379996 CIRBP-AS1Q8TBR5 109 aa4.7□□□□□ -1.66
CDKL5-202ENST00000379996 FUSP35637 526 aaKnown RBP eCLIP4.7□□□□□ -1.66
CDKL5-202ENST00000379996 PKHD1L1Q86WI1 4243 aa4.69□□□□□ -1.66
CDKL5-202ENST00000379996 KRTAP29-1A8MX34 341 aaPredicted RBP4.69□□□□□ -1.66
CDKL5-202ENST00000379996 A0A0G2JQZ4 141 aa4.68□□□□□ -1.66
CDKL5-202ENST00000379996 FAM229BQ4G0N7 80 aa4.68□□□□□ -1.66
CDKL5-202ENST00000379996 PHF5AQ7RTV0 110 aaKnown RBP4.68□□□□□ -1.66
CDKL5-202ENST00000379996 HIGD2AQ9BW72 106 aa4.67□□□□□ -1.66
CDKL5-202ENST00000379996 PRLHP81277 87 aa4.67□□□□□ -1.66
CDKL5-202ENST00000379996 UBE2BP63146 152 aa4.66□□□□□ -1.66
CDKL5-202ENST00000379996 VPS13BQ7Z7G8 4022 aa4.66□□□□□ -1.66
CDKL5-202ENST00000379996 LINC00472Q9H8W2 130 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms