RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 A0A087WTM6 91 aa11.95□□□□□ -0.5
PCDHA4-201ENST00000378125 TGP01266 2768 aa11.94□□□□□ -0.5
PCDHA4-201ENST00000378125 SPRR4Q96PI1 79 aa11.93□□□□□ -0.5
PCDHA4-201ENST00000378125 LINC00474Q9P2X8 69 aa11.93□□□□□ -0.5
PCDHA4-201ENST00000378125 TRAV7A0A075B6U4 112 aa11.92□□□□□ -0.5
PCDHA4-201ENST00000378125 DEFB116Q30KQ4 102 aa11.9□□□□□ -0.5
PCDHA4-201ENST00000378125 HECTD4Q9Y4D8 3996 aa11.9□□□□□ -0.5
PCDHA4-201ENST00000378125 SPACA4Q8TDM5 124 aa11.89□□□□□ -0.51
PCDHA4-201ENST00000378125 RTL8CO15255 209 aa11.88□□□□□ -0.51
PCDHA4-201ENST00000378125 PKIGQ9Y2B9 76 aa11.88□□□□□ -0.51
PCDHA4-201ENST00000378125 A0A1B0GW54 56 aa11.87□□□□□ -0.51
PCDHA4-201ENST00000378125 SNURFQ9Y675 71 aa11.87□□□□□ -0.51
PCDHA4-201ENST00000378125 Q6ZR54 194 aa11.87□□□□□ -0.51
PCDHA4-201ENST00000378125 A0A087WSZ3 146 aa11.86□□□□□ -0.51
PCDHA4-201ENST00000378125 BCE1O60756 84 aa11.86□□□□□ -0.51
PCDHA4-201ENST00000378125 FBN3Q75N90 2809 aa11.86□□□□□ -0.51
PCDHA4-201ENST00000378125 H0Y9J4 135 aa11.86□□□□□ -0.51
PCDHA4-201ENST00000378125 LY6G6CO95867 125 aa11.85□□□□□ -0.51
PCDHA4-201ENST00000378125 DSCR10P59022 87 aa11.84□□□□□ -0.51
PCDHA4-201ENST00000378125 K7EQZ3 153 aa11.83□□□□□ -0.52
PCDHA4-201ENST00000378125 IGLV8-61A0A075B6I0 122 aa11.82□□□□□ -0.52
PCDHA4-201ENST00000378125 KRTAP13-1Q8IUC0 172 aa11.81□□□□□ -0.52
PCDHA4-201ENST00000378125 TMEM258P61165 79 aa11.8□□□□□ -0.52
PCDHA4-201ENST00000378125 C1orf134Q5TEV5 83 aa11.8□□□□□ -0.52
PCDHA4-201ENST00000378125 SPRR1BP22528 89 aa11.79□□□□□ -0.52
PCDHA4-201ENST00000378125 DNAH17Q9UFH2 4485 aa11.78□□□□□ -0.52
PCDHA4-201ENST00000378125 IGLV5-52A0A0A0MRZ9 124 aa11.78□□□□□ -0.52
PCDHA4-201ENST00000378125 FAM30AQ9NZY2 134 aa11.77□□□□□ -0.52
PCDHA4-201ENST00000378125 RPL37AP61513 92 aaKnown RBP11.76□□□□□ -0.53
PCDHA4-201ENST00000378125 FRAS1Q86XX4 4008 aa11.76□□□□□ -0.53
PCDHA4-201ENST00000378125 IGLV9-49A0A0B4J1Y8 123 aa11.76□□□□□ -0.53
PCDHA4-201ENST00000378125 OCR1Q9BZK8 76 aa11.75□□□□□ -0.53
PCDHA4-201ENST00000378125 PSORS1C2Q9UIG4 136 aa11.75□□□□□ -0.53
PCDHA4-201ENST00000378125 DNAH8Q96JB1 4490 aa11.74□□□□□ -0.53
PCDHA4-201ENST00000378125 J3KT08 172 aa11.74□□□□□ -0.53
PCDHA4-201ENST00000378125 H7BZZ5 65 aa11.73□□□□□ -0.53
PCDHA4-201ENST00000378125 KLKP1Q107X0 134 aa11.73□□□□□ -0.53
PCDHA4-201ENST00000378125 TMEM254Q8TBM7 123 aa11.71□□□□□ -0.54
PCDHA4-201ENST00000378125 ANAPC11Q9NYG5 84 aa11.71□□□□□ -0.54
PCDHA4-201ENST00000378125 PLAC8Q9NZF1 115 aa11.69□□□□□ -0.54
PCDHA4-201ENST00000378125 DNAH6Q9C0G6 4158 aa11.68□□□□□ -0.54
PCDHA4-201ENST00000378125 HRCT1Q6UXD1 115 aa11.68□□□□□ -0.54
PCDHA4-201ENST00000378125 WFDC13Q8IUB5 93 aa11.68□□□□□ -0.54
PCDHA4-201ENST00000378125 HCG22E2RYF7 251 aa11.66□□□□□ -0.54
PCDHA4-201ENST00000378125 FAM236DA0A1B0GTK5 79 aa11.65□□□□□ -0.54
PCDHA4-201ENST00000378125 FAM236CP0DP71 79 aa11.65□□□□□ -0.54
PCDHA4-201ENST00000378125 RPS28P62857 69 aaKnown RBP11.64□□□□□ -0.55
PCDHA4-201ENST00000378125 OXTP01178 125 aa11.64□□□□□ -0.55
PCDHA4-201ENST00000378125 KRTAP10-2P60368 255 aa11.64□□□□□ -0.55
PCDHA4-201ENST00000378125 HYDINQ4G0P3 5121 aa11.62□□□□□ -0.55
PCDHA4-201ENST00000378125 ZNF861PO60384 105 aa11.61□□□□□ -0.55
PCDHA4-201ENST00000378125 LINC00472Q9H8W2 130 aa11.61□□□□□ -0.55
PCDHA4-201ENST00000378125 DNAH5Q8TE73 4624 aa11.6□□□□□ -0.55
PCDHA4-201ENST00000378125 A0A0U1RQV1 116 aa11.6□□□□□ -0.55
PCDHA4-201ENST00000378125 MOBPQ13875 183 aa11.59□□□□□ -0.55
PCDHA4-201ENST00000378125 LINC00483Q53H64 154 aa11.59□□□□□ -0.55
PCDHA4-201ENST00000378125 WWC2-AS2Q96NR7 200 aa11.58□□□□□ -0.56
PCDHA4-201ENST00000378125 DNAH11Q96DT5 4516 aa11.57□□□□□ -0.56
PCDHA4-201ENST00000378125 ZNF706Q9Y5V0 76 aaPredicted RBP11.57□□□□□ -0.56
PCDHA4-201ENST00000378125 PRR15Q8IV56 129 aa11.54□□□□□ -0.56
PCDHA4-201ENST00000378125 CIRBP-AS1Q8TBR5 109 aa11.54□□□□□ -0.56
PCDHA4-201ENST00000378125 NDUFC1O43677 76 aa11.54□□□□□ -0.56
PCDHA4-201ENST00000378125 A8MWP4 228 aa11.53□□□□□ -0.56
PCDHA4-201ENST00000378125 IGLV7-43P04211 117 aa11.52□□□□□ -0.57
PCDHA4-201ENST00000378125 ALMS1Q8TCU4 4167 aa11.51□□□□□ -0.57
PCDHA4-201ENST00000378125 CASC2Q6XLA1 102 aa11.51□□□□□ -0.57
PCDHA4-201ENST00000378125 C5orf47Q569G3 176 aa11.5□□□□□ -0.57
PCDHA4-201ENST00000378125 KRTAP29-1A8MX34 341 aaPredicted RBP11.49□□□□□ -0.57
PCDHA4-201ENST00000378125 Q96NJ1 140 aa11.49□□□□□ -0.57
PCDHA4-201ENST00000378125 LCE6AA0A183 80 aa11.48□□□□□ -0.57
PCDHA4-201ENST00000378125 PKD1P98161 4303 aa11.48□□□□□ -0.57
PCDHA4-201ENST00000378125 FAT2Q9NYQ8 4349 aa11.46□□□□□ -0.57
PCDHA4-201ENST00000378125 KRTAP10-1P60331 282 aa11.46□□□□□ -0.57
PCDHA4-201ENST00000378125 SERP1Q9Y6X1 66 aa11.44□□□□□ -0.58
PCDHA4-201ENST00000378125 NDUFB1O75438 58 aa11.43□□□□□ -0.58
PCDHA4-201ENST00000378125 LRP1BQ9NZR2 4599 aa11.42□□□□□ -0.58
PCDHA4-201ENST00000378125 MMP24-AS1A0A0U1RRL7 71 aa11.42□□□□□ -0.58
PCDHA4-201ENST00000378125 ZCCHC13Q8WW36 166 aaKnown RBP11.4□□□□□ -0.58
PCDHA4-201ENST00000378125 IGHV6-1A0A0B4J1U7 121 aa11.38□□□□□ -0.59
PCDHA4-201ENST00000378125 LINC00208Q96KT6 92 aa11.38□□□□□ -0.59
PCDHA4-201ENST00000378125 hDV103S1A0JD37 113 aa11.37□□□□□ -0.59
PCDHA4-201ENST00000378125 C4orf26Q17RF5 130 aa11.37□□□□□ -0.59
PCDHA4-201ENST00000378125 SPINK6Q6UWN8 80 aa11.37□□□□□ -0.59
PCDHA4-201ENST00000378125 MP68P56378 58 aa11.36□□□□□ -0.59
PCDHA4-201ENST00000378125 Q5XG85 94 aa11.36□□□□□ -0.59
PCDHA4-201ENST00000378125 ATP5EP56381 51 aaPredicted RBP11.36□□□□□ -0.59
PCDHA4-201ENST00000378125 PRR4Q16378 134 aa11.36□□□□□ -0.59
PCDHA4-201ENST00000378125 KRTAP21-3Q3LHN1 58 aa11.35□□□□□ -0.59
PCDHA4-201ENST00000378125 H0Y9P7 68 aa11.35□□□□□ -0.59
PCDHA4-201ENST00000378125 Q6ZSA8 131 aa11.34□□□□□ -0.59
PCDHA4-201ENST00000378125 CDK2AP2O75956 126 aa11.32□□□□□ -0.6
PCDHA4-201ENST00000378125 C8orf17Q9NRJ1 99 aa11.32□□□□□ -0.6
PCDHA4-201ENST00000378125 A0A087X002 238 aa11.32□□□□□ -0.6
PCDHA4-201ENST00000378125 NOTCH2NLQ7Z3S9 236 aa11.32□□□□□ -0.6
PCDHA4-201ENST00000378125 A0A1B0GVX0 72 aa11.31□□□□□ -0.6
PCDHA4-201ENST00000378125 FAM229BQ4G0N7 80 aa11.3□□□□□ -0.6
PCDHA4-201ENST00000378125 NDUFS5O43920 106 aa11.28□□□□□ -0.6
PCDHA4-201ENST00000378125 TRAV22A0A0B4J277 110 aa11.27□□□□□ -0.61
PCDHA4-201ENST00000378125 FP248Q71RG6 208 aaPredicted RBP11.25□□□□□ -0.61
PCDHA4-201ENST00000378125 VPS13BQ7Z7G8 4022 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms