RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 C16orf90A8MZG2 172 aa8.3□□□□□ -1.08
ACTN1-202ENST00000376839 MPLKIPQ8TAP9 179 aa8.3□□□□□ -1.08
ACTN1-202ENST00000376839 STAB2Q8WWQ8 2551 aa8.3□□□□□ -1.08
ACTN1-202ENST00000376839 HCG22E2RYF7 251 aa8.3□□□□□ -1.08
ACTN1-202ENST00000376839 ZCCHC13Q8WW36 166 aaKnown RBP8.3□□□□□ -1.08
ACTN1-202ENST00000376839 A0A087WSZ3 146 aa8.29□□□□□ -1.08
ACTN1-202ENST00000376839 KRTAP11-1Q8IUC1 163 aa8.29□□□□□ -1.08
ACTN1-202ENST00000376839 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.28□□□□□ -1.08
ACTN1-202ENST00000376839 COL7A1Q02388 2944 aa8.27□□□□□ -1.09
ACTN1-202ENST00000376839 CHTF8P0CG12 524 aa8.27□□□□□ -1.09
ACTN1-202ENST00000376839 IGLV8-61A0A075B6I0 122 aa8.26□□□□□ -1.09
ACTN1-202ENST00000376839 CNBPP62633 177 aaKnown RBP8.26□□□□□ -1.09
ACTN1-202ENST00000376839 WFDC13Q8IUB5 93 aa8.26□□□□□ -1.09
ACTN1-202ENST00000376839 MGAM2Q2M2H8 2515 aa8.26□□□□□ -1.09
ACTN1-202ENST00000376839 RPL37AP61513 92 aaKnown RBP8.25□□□□□ -1.09
ACTN1-202ENST00000376839 PHF5AQ7RTV0 110 aaKnown RBP8.25□□□□□ -1.09
ACTN1-202ENST00000376839 UBE2AP49459 152 aa8.25□□□□□ -1.09
ACTN1-202ENST00000376839 PRO0628Q9UI54 55 aa8.25□□□□□ -1.09
ACTN1-202ENST00000376839 DNAH7Q8WXX0 4024 aa8.24□□□□□ -1.09
ACTN1-202ENST00000376839 hDV103S1A0JD37 113 aa8.23□□□□□ -1.09
ACTN1-202ENST00000376839 TENM2Q9NT68 2774 aa8.23□□□□□ -1.09
ACTN1-202ENST00000376839 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
ACTN1-202ENST00000376839 C1orf64Q8NEQ6 169 aa8.22□□□□□ -1.09
ACTN1-202ENST00000376839 PRR4Q16378 134 aa8.21□□□□□ -1.09
ACTN1-202ENST00000376839 UBE2DNLQ8IWF7 75 aa8.19□□□□□ -1.1
ACTN1-202ENST00000376839 KRTAP29-1A8MX34 341 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-202ENST00000376839 BRK1Q8WUW1 75 aa8.18□□□□□ -1.1
ACTN1-202ENST00000376839 DYNC2H1Q8NCM8 4307 aaKnown RBP8.17□□□□□ -1.1
ACTN1-202ENST00000376839 PLECQ15149 4684 aaKnown RBP8.17□□□□□ -1.1
ACTN1-202ENST00000376839 SPRR1BP22528 89 aa8.17□□□□□ -1.1
ACTN1-202ENST00000376839 APLNQ9ULZ1 77 aa8.16□□□□□ -1.1
ACTN1-202ENST00000376839 H0Y9J4 135 aa8.15□□□□□ -1.1
ACTN1-202ENST00000376839 PRR15Q8IV56 129 aa8.15□□□□□ -1.1
ACTN1-202ENST00000376839 PANO1I0J062 215 aa8.15□□□□□ -1.11
ACTN1-202ENST00000376839 LINC00208Q96KT6 92 aa8.15□□□□□ -1.11
ACTN1-202ENST00000376839 MP68P56378 58 aa8.14□□□□□ -1.11
ACTN1-202ENST00000376839 C14orf177Q52M58 125 aa8.14□□□□□ -1.11
ACTN1-202ENST00000376839 CASC2Q6XLA1 102 aa8.14□□□□□ -1.11
ACTN1-202ENST00000376839 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
ACTN1-202ENST00000376839 LINC00472Q9H8W2 130 aa8.14□□□□□ -1.11
ACTN1-202ENST00000376839 TRAV22A0A0B4J277 110 aa8.14□□□□□ -1.11
ACTN1-202ENST00000376839 C9orf163Q8N9P6 203 aa8.13□□□□□ -1.11
ACTN1-202ENST00000376839 A8MWP4 228 aa8.12□□□□□ -1.11
ACTN1-202ENST00000376839 H0Y9P7 68 aa8.11□□□□□ -1.11
ACTN1-202ENST00000376839 NDUFB1O75438 58 aa8.11□□□□□ -1.11
ACTN1-202ENST00000376839 B9D2Q9BPU9 175 aa8.11□□□□□ -1.11
ACTN1-202ENST00000376839 PKIGQ9Y2B9 76 aa8.1□□□□□ -1.11
ACTN1-202ENST00000376839 Q1T7F1 81 aa8.09□□□□□ -1.11
ACTN1-202ENST00000376839 KRTAP13-1Q8IUC0 172 aa8.09□□□□□ -1.11
ACTN1-202ENST00000376839 MMP24-AS1A0A0U1RRL7 71 aa8.06□□□□□ -1.12
ACTN1-202ENST00000376839 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
ACTN1-202ENST00000376839 PSPHP1O15172 72 aa8.06□□□□□ -1.12
ACTN1-202ENST00000376839 Q6ZRN7 208 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-202ENST00000376839 IGLV9-49A0A0B4J1Y8 123 aa8.05□□□□□ -1.12
ACTN1-202ENST00000376839 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-202ENST00000376839 H3BPC8 53 aa8.03□□□□□ -1.12
ACTN1-202ENST00000376839 Q96NJ1 140 aa8.02□□□□□ -1.12
ACTN1-202ENST00000376839 FRAS1Q86XX4 4008 aa8.02□□□□□ -1.13
ACTN1-202ENST00000376839 SPANXA2-OT1Q8N9U9 137 aa8.02□□□□□ -1.13
ACTN1-202ENST00000376839 MDFIQ99750 246 aa8.02□□□□□ -1.13
ACTN1-202ENST00000376839 STARD9Q9P2P6 4700 aa8.01□□□□□ -1.13
ACTN1-202ENST00000376839 HECTD4Q9Y4D8 3996 aa8.01□□□□□ -1.13
ACTN1-202ENST00000376839 VPS13DQ5THJ4 4388 aa8.01□□□□□ -1.13
ACTN1-202ENST00000376839 SPACA4Q8TDM5 124 aa8.01□□□□□ -1.13
ACTN1-202ENST00000376839 DNAH8Q96JB1 4490 aa8□□□□□ -1.13
ACTN1-202ENST00000376839 A8MUN3 132 aa7.98□□□□□ -1.13
ACTN1-202ENST00000376839 MOBPQ13875 183 aa7.97□□□□□ -1.13
ACTN1-202ENST00000376839 ASB16-AS1Q495Z4 193 aa7.96□□□□□ -1.14
ACTN1-202ENST00000376839 LINC00483Q53H64 154 aa7.96□□□□□ -1.14
ACTN1-202ENST00000376839 ANAPC11Q9NYG5 84 aa7.96□□□□□ -1.14
ACTN1-202ENST00000376839 DNAH2Q9P225 4427 aa7.95□□□□□ -1.14
ACTN1-202ENST00000376839 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
ACTN1-202ENST00000376839 C8orf17Q9NRJ1 99 aa7.94□□□□□ -1.14
ACTN1-202ENST00000376839 PCOTHQ58A44 107 aa7.94□□□□□ -1.14
ACTN1-202ENST00000376839 NUPR2A6NF83 97 aa7.93□□□□□ -1.14
ACTN1-202ENST00000376839 WWC2-AS2Q96NR7 200 aa7.93□□□□□ -1.14
ACTN1-202ENST00000376839 KMT2AQ03164 3969 aa7.93□□□□□ -1.14
ACTN1-202ENST00000376839 Q8N9P0 234 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-202ENST00000376839 PSORS1C2Q9UIG4 136 aa7.93□□□□□ -1.14
ACTN1-202ENST00000376839 A0A087WTM6 91 aa7.93□□□□□ -1.14
ACTN1-202ENST00000376839 IGHV6-1A0A0B4J1U7 121 aa7.93□□□□□ -1.14
ACTN1-202ENST00000376839 Q5VV11 94 aa7.93□□□□□ -1.14
ACTN1-202ENST00000376839 V9GYY9 64 aa7.93□□□□□ -1.14
ACTN1-202ENST00000376839 DNAH17Q9UFH2 4485 aa7.93□□□□□ -1.14
ACTN1-202ENST00000376839 PRKDCP78527 4128 aaKnown RBP7.92□□□□□ -1.14
ACTN1-202ENST00000376839 IGLV7-46A0A075B6I9 117 aa7.91□□□□□ -1.14
ACTN1-202ENST00000376839 CD164Q04900 197 aa7.91□□□□□ -1.14
ACTN1-202ENST00000376839 A8MU10 97 aa7.91□□□□□ -1.14
ACTN1-202ENST00000376839 COA5Q86WW8 74 aa7.9□□□□□ -1.14
ACTN1-202ENST00000376839 IGLV5-52A0A0A0MRZ9 124 aa7.9□□□□□ -1.15
ACTN1-202ENST00000376839 A0A1B0GVX0 72 aa7.9□□□□□ -1.15
ACTN1-202ENST00000376839 TP53AIP1Q9HCN2 124 aa7.9□□□□□ -1.15
ACTN1-202ENST00000376839 A0A087X002 238 aa7.89□□□□□ -1.15
ACTN1-202ENST00000376839 NDUFS5O43920 106 aa7.89□□□□□ -1.15
ACTN1-202ENST00000376839 NOTCH2NLQ7Z3S9 236 aa7.89□□□□□ -1.15
ACTN1-202ENST00000376839 RTL8CO15255 209 aa7.89□□□□□ -1.15
ACTN1-202ENST00000376839 Q6ZR54 194 aa7.88□□□□□ -1.15
ACTN1-202ENST00000376839 ZNF706Q9Y5V0 76 aaPredicted RBP7.88□□□□□ -1.15
ACTN1-202ENST00000376839 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
ACTN1-202ENST00000376839 LIMD2Q9BT23 127 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms