RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SPRR4Q96PI1 79 aa12.61□□□□□ -0.39
VSX1-202ENST00000376709 H0Y9J4 135 aa12.6□□□□□ -0.39
VSX1-202ENST00000376709 BCE1O60756 84 aa12.6□□□□□ -0.39
VSX1-202ENST00000376709 KRTAP21-3Q3LHN1 58 aa12.6□□□□□ -0.39
VSX1-202ENST00000376709 UBE2AP49459 152 aa12.6□□□□□ -0.39
VSX1-202ENST00000376709 SRRM2Q9UQ35 2752 aaKnown RBP12.58□□□□□ -0.4
VSX1-202ENST00000376709 TRAV7A0A075B6U4 112 aa12.57□□□□□ -0.4
VSX1-202ENST00000376709 IGKV4-1P06312 121 aa12.57□□□□□ -0.4
VSX1-202ENST00000376709 Q6ZR54 194 aa12.57□□□□□ -0.4
VSX1-202ENST00000376709 SPACA4Q8TDM5 124 aa12.57□□□□□ -0.4
VSX1-202ENST00000376709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.57□□□□□ -0.4
VSX1-202ENST00000376709 IGFL1Q6UW32 110 aa12.56□□□□□ -0.4
VSX1-202ENST00000376709 C20orf197Q8N268 126 aa12.56□□□□□ -0.4
VSX1-202ENST00000376709 A0A0G2JQZ4 141 aa12.55□□□□□ -0.4
VSX1-202ENST00000376709 IGLV8-61A0A075B6I0 122 aa12.53□□□□□ -0.4
VSX1-202ENST00000376709 RTL8CO15255 209 aa12.52□□□□□ -0.4
VSX1-202ENST00000376709 TMEM258P61165 79 aa12.52□□□□□ -0.4
VSX1-202ENST00000376709 LY6G6CO95867 125 aa12.51□□□□□ -0.41
VSX1-202ENST00000376709 DNAH17Q9UFH2 4485 aa12.5□□□□□ -0.41
VSX1-202ENST00000376709 SPRR1BP22528 89 aa12.49□□□□□ -0.41
VSX1-202ENST00000376709 C1orf134Q5TEV5 83 aa12.47□□□□□ -0.41
VSX1-202ENST00000376709 DNAH6Q9C0G6 4158 aa12.47□□□□□ -0.41
VSX1-202ENST00000376709 KRTAP13-1Q8IUC0 172 aa12.46□□□□□ -0.41
VSX1-202ENST00000376709 A0A087WSZ3 146 aa12.45□□□□□ -0.42
VSX1-202ENST00000376709 WWC2-AS2Q96NR7 200 aa12.44□□□□□ -0.42
VSX1-202ENST00000376709 SNURFQ9Y675 71 aa12.44□□□□□ -0.42
VSX1-202ENST00000376709 IGLV5-52A0A0A0MRZ9 124 aa12.43□□□□□ -0.42
VSX1-202ENST00000376709 DSCR10P59022 87 aa12.42□□□□□ -0.42
VSX1-202ENST00000376709 KLKP1Q107X0 134 aa12.42□□□□□ -0.42
VSX1-202ENST00000376709 ALMS1Q8TCU4 4167 aa12.41□□□□□ -0.42
VSX1-202ENST00000376709 J3KT08 172 aa12.4□□□□□ -0.42
VSX1-202ENST00000376709 K7EQZ3 153 aa12.4□□□□□ -0.42
VSX1-202ENST00000376709 H7BZZ5 65 aa12.39□□□□□ -0.43
VSX1-202ENST00000376709 FRAS1Q86XX4 4008 aa12.38□□□□□ -0.43
VSX1-202ENST00000376709 DEFB116Q30KQ4 102 aa12.37□□□□□ -0.43
VSX1-202ENST00000376709 OCR1Q9BZK8 76 aa12.37□□□□□ -0.43
VSX1-202ENST00000376709 PLAC8Q9NZF1 115 aa12.37□□□□□ -0.43
VSX1-202ENST00000376709 PSORS1C2Q9UIG4 136 aa12.36□□□□□ -0.43
VSX1-202ENST00000376709 HYDINQ4G0P3 5121 aa12.33□□□□□ -0.44
VSX1-202ENST00000376709 RPS28P62857 69 aaKnown RBP12.33□□□□□ -0.44
VSX1-202ENST00000376709 TMEM254Q8TBM7 123 aa12.32□□□□□ -0.44
VSX1-202ENST00000376709 DNAH8Q96JB1 4490 aa12.32□□□□□ -0.44
VSX1-202ENST00000376709 IGLV9-49A0A0B4J1Y8 123 aa12.32□□□□□ -0.44
VSX1-202ENST00000376709 FAM236DA0A1B0GTK5 79 aa12.32□□□□□ -0.44
VSX1-202ENST00000376709 FAM236CP0DP71 79 aa12.32□□□□□ -0.44
VSX1-202ENST00000376709 DNAH11Q96DT5 4516 aa12.3□□□□□ -0.44
VSX1-202ENST00000376709 ZNF706Q9Y5V0 76 aaPredicted RBP12.3□□□□□ -0.44
VSX1-202ENST00000376709 OXTP01178 125 aa12.29□□□□□ -0.44
VSX1-202ENST00000376709 HCG22E2RYF7 251 aa12.29□□□□□ -0.44
VSX1-202ENST00000376709 FAM30AQ9NZY2 134 aa12.29□□□□□ -0.44
VSX1-202ENST00000376709 LINC00483Q53H64 154 aa12.27□□□□□ -0.45
VSX1-202ENST00000376709 DNAH5Q8TE73 4624 aa12.26□□□□□ -0.45
VSX1-202ENST00000376709 ZNF861PO60384 105 aa12.26□□□□□ -0.45
VSX1-202ENST00000376709 RPL37AP61513 92 aaKnown RBP12.26□□□□□ -0.45
VSX1-202ENST00000376709 NDUFC1O43677 76 aa12.24□□□□□ -0.45
VSX1-202ENST00000376709 KRTAP10-2P60368 255 aa12.23□□□□□ -0.45
VSX1-202ENST00000376709 A0A0U1RQV1 116 aa12.22□□□□□ -0.45
VSX1-202ENST00000376709 LINC00472Q9H8W2 130 aa12.22□□□□□ -0.45
VSX1-202ENST00000376709 FAT2Q9NYQ8 4349 aa12.21□□□□□ -0.46
VSX1-202ENST00000376709 WFDC13Q8IUB5 93 aa12.2□□□□□ -0.46
VSX1-202ENST00000376709 PKD1P98161 4303 aa12.2□□□□□ -0.46
VSX1-202ENST00000376709 ANAPC11Q9NYG5 84 aa12.18□□□□□ -0.46
VSX1-202ENST00000376709 A8MWP4 228 aa12.18□□□□□ -0.46
VSX1-202ENST00000376709 MOBPQ13875 183 aa12.18□□□□□ -0.46
VSX1-202ENST00000376709 HRCT1Q6UXD1 115 aa12.17□□□□□ -0.46
VSX1-202ENST00000376709 PRR15Q8IV56 129 aa12.17□□□□□ -0.46
VSX1-202ENST00000376709 IGLV7-43P04211 117 aa12.16□□□□□ -0.46
VSX1-202ENST00000376709 LCE6AA0A183 80 aa12.15□□□□□ -0.47
VSX1-202ENST00000376709 CIRBP-AS1Q8TBR5 109 aa12.14□□□□□ -0.47
VSX1-202ENST00000376709 SERP1Q9Y6X1 66 aa12.13□□□□□ -0.47
VSX1-202ENST00000376709 CASC2Q6XLA1 102 aa12.12□□□□□ -0.47
VSX1-202ENST00000376709 SACSQ9NZJ4 4579 aa12.09□□□□□ -0.47
VSX1-202ENST00000376709 KRTAP29-1A8MX34 341 aaPredicted RBP12.09□□□□□ -0.47
VSX1-202ENST00000376709 C5orf47Q569G3 176 aa12.09□□□□□ -0.47
VSX1-202ENST00000376709 NDUFB1O75438 58 aa12.09□□□□□ -0.47
VSX1-202ENST00000376709 ATP5EP56381 51 aaPredicted RBP12.08□□□□□ -0.48
VSX1-202ENST00000376709 Q96NJ1 140 aa12.08□□□□□ -0.48
VSX1-202ENST00000376709 KRTAP10-1P60331 282 aa12.06□□□□□ -0.48
VSX1-202ENST00000376709 ZCCHC13Q8WW36 166 aaKnown RBP12.03□□□□□ -0.48
VSX1-202ENST00000376709 Q5XG85 94 aa12.02□□□□□ -0.48
VSX1-202ENST00000376709 Q6ZSA8 131 aa12.02□□□□□ -0.48
VSX1-202ENST00000376709 MMP24-AS1A0A0U1RRL7 71 aa12.01□□□□□ -0.49
VSX1-202ENST00000376709 MP68P56378 58 aa12□□□□□ -0.49
VSX1-202ENST00000376709 LRP1BQ9NZR2 4599 aa11.99□□□□□ -0.49
VSX1-202ENST00000376709 hDV103S1A0JD37 113 aa11.98□□□□□ -0.49
VSX1-202ENST00000376709 CDK2AP2O75956 126 aa11.96□□□□□ -0.49
VSX1-202ENST00000376709 C4orf26Q17RF5 130 aa11.96□□□□□ -0.5
VSX1-202ENST00000376709 PKHD1P08F94 4074 aa11.94□□□□□ -0.5
VSX1-202ENST00000376709 IGHV6-1A0A0B4J1U7 121 aa11.94□□□□□ -0.5
VSX1-202ENST00000376709 A0A1B0GVX0 72 aa11.92□□□□□ -0.5
VSX1-202ENST00000376709 H0Y9P7 68 aa11.92□□□□□ -0.5
VSX1-202ENST00000376709 LINC00208Q96KT6 92 aa11.92□□□□□ -0.5
VSX1-202ENST00000376709 C8orf17Q9NRJ1 99 aa11.92□□□□□ -0.5
VSX1-202ENST00000376709 SSBP3-AS1Q7Z2R9 100 aa11.91□□□□□ -0.5
VSX1-202ENST00000376709 SMIM26A0A096LP01 95 aa11.89□□□□□ -0.51
VSX1-202ENST00000376709 CD164Q04900 197 aa11.89□□□□□ -0.51
VSX1-202ENST00000376709 FP248Q71RG6 208 aaPredicted RBP11.89□□□□□ -0.51
VSX1-202ENST00000376709 FAM229BQ4G0N7 80 aa11.89□□□□□ -0.51
VSX1-202ENST00000376709 SPINK6Q6UWN8 80 aa11.88□□□□□ -0.51
VSX1-202ENST00000376709 ASB16-AS1Q495Z4 193 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms