RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 J3QL48 77 aa7.39□□□□□ -1.23
TM9SF2-201ENST00000376387 Q6ZRX8 168 aa7.39□□□□□ -1.23
TM9SF2-201ENST00000376387 KRTAP4-16G5E9R7 235 aaPredicted RBP7.38□□□□□ -1.23
TM9SF2-201ENST00000376387 KRTAP7-1Q8IUC3 87 aa7.38□□□□□ -1.23
TM9SF2-201ENST00000376387 ATP11AUNQ6ZP68 121 aa7.37□□□□□ -1.23
TM9SF2-201ENST00000376387 DEFB116Q30KQ4 102 aa7.37□□□□□ -1.23
TM9SF2-201ENST00000376387 ZCCHC13Q8WW36 166 aaKnown RBP7.37□□□□□ -1.23
TM9SF2-201ENST00000376387 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.37□□□□□ -1.23
TM9SF2-201ENST00000376387 Q8NBF4 154 aa7.37□□□□□ -1.23
TM9SF2-201ENST00000376387 Q1T7F1 81 aa7.36□□□□□ -1.23
TM9SF2-201ENST00000376387 CASC10Q5T4H9 136 aa7.36□□□□□ -1.23
TM9SF2-201ENST00000376387 DNAH1Q9P2D7 4330 aa7.35□□□□□ -1.23
TM9SF2-201ENST00000376387 IGLV1-50A0A075B6I6 118 aa7.34□□□□□ -1.23
TM9SF2-201ENST00000376387 DHRS4-AS1Q9P1J3 65 aa7.34□□□□□ -1.23
TM9SF2-201ENST00000376387 ETDCA0A1B0GVM5 59 aa7.34□□□□□ -1.23
TM9SF2-201ENST00000376387 SPRR4Q96PI1 79 aa7.34□□□□□ -1.23
TM9SF2-201ENST00000376387 Q5VV11 94 aa7.33□□□□□ -1.24
TM9SF2-201ENST00000376387 NSD1Q96L73 2696 aaPredicted RBP7.33□□□□□ -1.24
TM9SF2-201ENST00000376387 PRR15LQ9BU68 103 aa7.33□□□□□ -1.24
TM9SF2-201ENST00000376387 SRRM2Q9UQ35 2752 aaKnown RBP7.33□□□□□ -1.24
TM9SF2-201ENST00000376387 SPRR1AP35321 89 aa7.32□□□□□ -1.24
TM9SF2-201ENST00000376387 LINC01556Q5JQF7 62 aa7.31□□□□□ -1.24
TM9SF2-201ENST00000376387 CSMD3Q7Z407 3707 aa7.31□□□□□ -1.24
TM9SF2-201ENST00000376387 WFDC13Q8IUB5 93 aa7.3□□□□□ -1.24
TM9SF2-201ENST00000376387 DNAH10Q8IVF4 4471 aa7.3□□□□□ -1.24
TM9SF2-201ENST00000376387 IGHV6-1A0A0B4J1U7 121 aa7.3□□□□□ -1.24
TM9SF2-201ENST00000376387 PSCAO43653 123 aa7.3□□□□□ -1.24
TM9SF2-201ENST00000376387 LINC00476Q8WZB0 136 aa7.3□□□□□ -1.24
TM9SF2-201ENST00000376387 H3BNG1 76 aa7.3□□□□□ -1.24
TM9SF2-201ENST00000376387 RPL37AP61513 92 aaKnown RBP7.29□□□□□ -1.24
TM9SF2-201ENST00000376387 A0A1B0GW54 56 aa7.28□□□□□ -1.24
TM9SF2-201ENST00000376387 LYSTQ99698 3801 aa7.28□□□□□ -1.24
TM9SF2-201ENST00000376387 FLNBO75369 2602 aaKnown RBP7.28□□□□□ -1.24
TM9SF2-201ENST00000376387 TLX1NBP0CAT3 122 aa7.27□□□□□ -1.24
TM9SF2-201ENST00000376387 CMYA5Q8N3K9 4069 aa7.27□□□□□ -1.25
TM9SF2-201ENST00000376387 KRTAP10-11P60412 298 aa7.27□□□□□ -1.25
TM9SF2-201ENST00000376387 DEFB131BA0A096LNP1 70 aa7.27□□□□□ -1.25
TM9SF2-201ENST00000376387 IGFL1Q6UW32 110 aa7.27□□□□□ -1.25
TM9SF2-201ENST00000376387 FBN1P35555 2871 aaKnown RBP7.26□□□□□ -1.25
TM9SF2-201ENST00000376387 MOBPQ13875 183 aa7.26□□□□□ -1.25
TM9SF2-201ENST00000376387 IGLV5-37A0A075B6J1 123 aa7.26□□□□□ -1.25
TM9SF2-201ENST00000376387 Q75L30 129 aa7.24□□□□□ -1.25
TM9SF2-201ENST00000376387 CYP4F30PQ9H0H9 118 aa7.24□□□□□ -1.25
TM9SF2-201ENST00000376387 A0A087WSZ3 146 aa7.24□□□□□ -1.25
TM9SF2-201ENST00000376387 PRLHP81277 87 aa7.24□□□□□ -1.25
TM9SF2-201ENST00000376387 C1orf134Q5TEV5 83 aa7.24□□□□□ -1.25
TM9SF2-201ENST00000376387 DNAH10OSP0CZ25 163 aa7.23□□□□□ -1.25
TM9SF2-201ENST00000376387 LINC00208Q96KT6 92 aa7.23□□□□□ -1.25
TM9SF2-201ENST00000376387 MAST4O15021 2626 aa7.21□□□□□ -1.26
TM9SF2-201ENST00000376387 B9D2Q9BPU9 175 aa7.19□□□□□ -1.26
TM9SF2-201ENST00000376387 KRTAP29-1A8MX34 341 aaPredicted RBP7.18□□□□□ -1.26
TM9SF2-201ENST00000376387 DNAH9Q9NYC9 4486 aa7.18□□□□□ -1.26
TM9SF2-201ENST00000376387 IGKV2-24A0A0C4DH68 120 aa7.18□□□□□ -1.26
TM9SF2-201ENST00000376387 H0Y9P7 68 aa7.17□□□□□ -1.26
TM9SF2-201ENST00000376387 NDUFB1O75438 58 aa7.17□□□□□ -1.26
TM9SF2-201ENST00000376387 NOTCH1P46531 2555 aa7.16□□□□□ -1.26
TM9SF2-201ENST00000376387 CNBPP62633 177 aaKnown RBP7.16□□□□□ -1.26
TM9SF2-201ENST00000376387 KRTAP11-1Q8IUC1 163 aa7.16□□□□□ -1.26
TM9SF2-201ENST00000376387 A0A096LNI7 61 aa7.15□□□□□ -1.26
TM9SF2-201ENST00000376387 TENM2Q9NT68 2774 aa7.15□□□□□ -1.27
TM9SF2-201ENST00000376387 DNAH3Q8TD57 4116 aa7.15□□□□□ -1.27
TM9SF2-201ENST00000376387 CASC2Q6XLA1 102 aa7.15□□□□□ -1.27
TM9SF2-201ENST00000376387 LIMD2Q9BT23 127 aa7.14□□□□□ -1.27
TM9SF2-201ENST00000376387 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
TM9SF2-201ENST00000376387 STAB1Q9NY15 2570 aa7.14□□□□□ -1.27
TM9SF2-201ENST00000376387 Q8N9P0 234 aaPredicted RBP7.13□□□□□ -1.27
TM9SF2-201ENST00000376387 KRTAP24-1Q3LI83 254 aa7.13□□□□□ -1.27
TM9SF2-201ENST00000376387 IGLV8-61A0A075B6I0 122 aa7.13□□□□□ -1.27
TM9SF2-201ENST00000376387 CDC42SE1Q9NRR8 79 aa7.12□□□□□ -1.27
TM9SF2-201ENST00000376387 COL6A5A8TX70 2615 aa7.12□□□□□ -1.27
TM9SF2-201ENST00000376387 HUWE1Q7Z6Z7 4374 aaKnown RBP7.11□□□□□ -1.27
TM9SF2-201ENST00000376387 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
TM9SF2-201ENST00000376387 CHTF8P0CG12 524 aa7.1□□□□□ -1.27
TM9SF2-201ENST00000376387 C9orf163Q8N9P6 203 aa7.1□□□□□ -1.27
TM9SF2-201ENST00000376387 LINC00472Q9H8W2 130 aa7.1□□□□□ -1.27
TM9SF2-201ENST00000376387 NBEAL1Q6ZS30 2694 aa7.09□□□□□ -1.27
TM9SF2-201ENST00000376387 SPANXA2-OT1Q8N9U9 137 aa7.09□□□□□ -1.27
TM9SF2-201ENST00000376387 A8MWP4 228 aa7.08□□□□□ -1.28
TM9SF2-201ENST00000376387 DNAH7Q8WXX0 4024 aa7.08□□□□□ -1.28
TM9SF2-201ENST00000376387 KRTAP1-5Q9BYS1 174 aa7.08□□□□□ -1.28
TM9SF2-201ENST00000376387 PCOTHQ58A44 107 aa7.06□□□□□ -1.28
TM9SF2-201ENST00000376387 MMP24-AS1A0A0U1RRL7 71 aa7.05□□□□□ -1.28
TM9SF2-201ENST00000376387 PLA2G1BP04054 148 aaKnown RBP7.05□□□□□ -1.28
TM9SF2-201ENST00000376387 COA5Q86WW8 74 aa7.05□□□□□ -1.28
TM9SF2-201ENST00000376387 H3BPC8 53 aa7.04□□□□□ -1.28
TM9SF2-201ENST00000376387 KRTAP16-1A8MUX0 517 aa7.03□□□□□ -1.28
TM9SF2-201ENST00000376387 SPRR1BP22528 89 aa7.01□□□□□ -1.29
TM9SF2-201ENST00000376387 SPINK7P58062 85 aa7.01□□□□□ -1.29
TM9SF2-201ENST00000376387 IGLV7-46A0A075B6I9 117 aa7□□□□□ -1.29
TM9SF2-201ENST00000376387 ROMO1P60602 79 aa7□□□□□ -1.29
TM9SF2-201ENST00000376387 SPAG11AQ6PDA7 123 aa6.98□□□□□ -1.29
TM9SF2-201ENST00000376387 Q6ZR54 194 aa6.98□□□□□ -1.29
TM9SF2-201ENST00000376387 Q96NJ1 140 aa6.98□□□□□ -1.29
TM9SF2-201ENST00000376387 PANO1I0J062 215 aa6.98□□□□□ -1.29
TM9SF2-201ENST00000376387 FRAS1Q86XX4 4008 aa6.97□□□□□ -1.29
TM9SF2-201ENST00000376387 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
TM9SF2-201ENST00000376387 LOC101927531A0A1B0GV80 90 aa6.97□□□□□ -1.29
TM9SF2-201ENST00000376387 STAB2Q8WWQ8 2551 aa6.95□□□□□ -1.3
TM9SF2-201ENST00000376387 MIR22HGQ0VDD5 57 aa6.95□□□□□ -1.3
TM9SF2-201ENST00000376387 ASB16-AS1Q495Z4 193 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms