RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 PRLHP81277 87 aa13.04□□□□□ -0.32
HLA-C-201ENST00000376228 KRTAP13-1Q8IUC0 172 aa13.03□□□□□ -0.32
HLA-C-201ENST00000376228 CDIP1Q9H305 208 aa13.03□□□□□ -0.32
HLA-C-201ENST00000376228 LOC110117498A0A087WWA1 95 aa13.03□□□□□ -0.32
HLA-C-201ENST00000376228 PDE6GP18545 87 aa13.02□□□□□ -0.33
HLA-C-201ENST00000376228 C21orf62-AS1Q17RA5 79 aa13.01□□□□□ -0.33
HLA-C-201ENST00000376228 SRRM2Q9UQ35 2752 aaKnown RBP13□□□□□ -0.33
HLA-C-201ENST00000376228 CCKP06307 115 aa13□□□□□ -0.33
HLA-C-201ENST00000376228 UBE2AP49459 152 aa13□□□□□ -0.33
HLA-C-201ENST00000376228 ST20-AS1Q8NBB2 130 aa13□□□□□ -0.33
HLA-C-201ENST00000376228 TRBV7-4A0A0J9YYF1 115 aa12.98□□□□□ -0.33
HLA-C-201ENST00000376228 DEFB105AQ8NG35 78 aa12.98□□□□□ -0.33
HLA-C-201ENST00000376228 HIGD2AQ9BW72 106 aa12.98□□□□□ -0.33
HLA-C-201ENST00000376228 GAGE2AQ6NT46 116 aa12.98□□□□□ -0.33
HLA-C-201ENST00000376228 Q6ZQT0 140 aa12.98□□□□□ -0.33
HLA-C-201ENST00000376228 DSCR8Q96T75 97 aa12.98□□□□□ -0.33
HLA-C-201ENST00000376228 PSORS1C2Q9UIG4 136 aa12.97□□□□□ -0.33
HLA-C-201ENST00000376228 A0A1B0GV72 72 aa12.94□□□□□ -0.34
HLA-C-201ENST00000376228 SPRR1BP22528 89 aa12.94□□□□□ -0.34
HLA-C-201ENST00000376228 PLA2G1BP04054 148 aaKnown RBP12.93□□□□□ -0.34
HLA-C-201ENST00000376228 SMIM29Q86T20 159 aa12.92□□□□□ -0.34
HLA-C-201ENST00000376228 MYCBP2O75592 4640 aa12.91□□□□□ -0.34
HLA-C-201ENST00000376228 SIGMAR1Q99720 223 aa12.9□□□□□ -0.34
HLA-C-201ENST00000376228 C1orf137Q5JT78 98 aa12.88□□□□□ -0.35
HLA-C-201ENST00000376228 FLG2Q5D862 2391 aaPredicted RBP12.88□□□□□ -0.35
HLA-C-201ENST00000376228 ZNF861PO60384 105 aa12.88□□□□□ -0.35
HLA-C-201ENST00000376228 KRTAP10-4P60372 401 aaPredicted RBP12.88□□□□□ -0.35
HLA-C-201ENST00000376228 C3orf22Q8N5N4 141 aa12.87□□□□□ -0.35
HLA-C-201ENST00000376228 IGLV8-61A0A075B6I0 122 aa12.85□□□□□ -0.35
HLA-C-201ENST00000376228 LINC00846Q9NV44 126 aa12.85□□□□□ -0.35
HLA-C-201ENST00000376228 RPL37AP61513 92 aaKnown RBP12.84□□□□□ -0.35
HLA-C-201ENST00000376228 IGLV7-43P04211 117 aa12.83□□□□□ -0.35
HLA-C-201ENST00000376228 LINC00643Q86TS7 51 aa12.83□□□□□ -0.35
HLA-C-201ENST00000376228 F8WEM9 126 aa12.83□□□□□ -0.36
HLA-C-201ENST00000376228 A0A1B0GW54 56 aa12.82□□□□□ -0.36
HLA-C-201ENST00000376228 ZNF706Q9Y5V0 76 aaPredicted RBP12.82□□□□□ -0.36
HLA-C-201ENST00000376228 SPRR4Q96PI1 79 aa12.81□□□□□ -0.36
HLA-C-201ENST00000376228 MT-ATP8P03928 68 aa12.8□□□□□ -0.36
HLA-C-201ENST00000376228 LINC00483Q53H64 154 aa12.8□□□□□ -0.36
HLA-C-201ENST00000376228 HERC1Q15751 4861 aa12.75□□□□□ -0.37
HLA-C-201ENST00000376228 PKHD1L1Q86WI1 4243 aa12.75□□□□□ -0.37
HLA-C-201ENST00000376228 LRP1Q07954 4544 aaKnown RBP12.74□□□□□ -0.37
HLA-C-201ENST00000376228 Q6JHZ5 121 aa12.74□□□□□ -0.37
HLA-C-201ENST00000376228 Q8NBF4 154 aa12.74□□□□□ -0.37
HLA-C-201ENST00000376228 UBL5Q9BZL1 73 aa12.74□□□□□ -0.37
HLA-C-201ENST00000376228 A0A1W2PNM2 257 aa12.73□□□□□ -0.37
HLA-C-201ENST00000376228 Q6Q795 121 aa12.72□□□□□ -0.37
HLA-C-201ENST00000376228 TRBV7-7A0A0K0K1E9 115 aa12.71□□□□□ -0.38
HLA-C-201ENST00000376228 IGFL1Q6UW32 110 aa12.71□□□□□ -0.38
HLA-C-201ENST00000376228 IMUPQ9GZP8 106 aa12.7□□□□□ -0.38
HLA-C-201ENST00000376228 FAT3Q8TDW7 4589 aa12.69□□□□□ -0.38
HLA-C-201ENST00000376228 DMBT1Q9UGM3 2413 aaPredicted RBP12.69□□□□□ -0.38
HLA-C-201ENST00000376228 SCGB1A1P11684 91 aa12.68□□□□□ -0.38
HLA-C-201ENST00000376228 ATP5EP2Q5VTU8 51 aa12.68□□□□□ -0.38
HLA-C-201ENST00000376228 CRYGAP11844 174 aa12.67□□□□□ -0.38
HLA-C-201ENST00000376228 Q6ZVQ6 151 aa12.67□□□□□ -0.38
HLA-C-201ENST00000376228 J3QL48 77 aa12.67□□□□□ -0.38
HLA-C-201ENST00000376228 KRTAP29-1A8MX34 341 aaPredicted RBP12.65□□□□□ -0.38
HLA-C-201ENST00000376228 CXCL6P80162 114 aa12.58□□□□□ -0.4
HLA-C-201ENST00000376228 NREPQ16612 68 aa12.58□□□□□ -0.4
HLA-C-201ENST00000376228 IGKV3D-7A0A0C4DH55 119 aa12.57□□□□□ -0.4
HLA-C-201ENST00000376228 A0A0G2JQZ4 141 aa12.57□□□□□ -0.4
HLA-C-201ENST00000376228 IGLV9-49A0A0B4J1Y8 123 aa12.57□□□□□ -0.4
HLA-C-201ENST00000376228 OXTP01178 125 aa12.57□□□□□ -0.4
HLA-C-201ENST00000376228 C9orf153Q5TBE3 101 aa12.55□□□□□ -0.4
HLA-C-201ENST00000376228 FAM229BQ4G0N7 80 aa12.54□□□□□ -0.4
HLA-C-201ENST00000376228 ANAPC11Q9NYG5 84 aa12.53□□□□□ -0.4
HLA-C-201ENST00000376228 MOBPQ13875 183 aa12.51□□□□□ -0.41
HLA-C-201ENST00000376228 SPINK6Q6UWN8 80 aa12.51□□□□□ -0.41
HLA-C-201ENST00000376228 SSBP3-AS1Q7Z2R9 100 aa12.51□□□□□ -0.41
HLA-C-201ENST00000376228 A0A087WSZ3 146 aa12.49□□□□□ -0.41
HLA-C-201ENST00000376228 KRTAP1-4P0C5Y4 121 aa12.47□□□□□ -0.41
HLA-C-201ENST00000376228 BPY2O14599 106 aa12.46□□□□□ -0.42
HLA-C-201ENST00000376228 MT1HL1P0DM35 61 aa12.45□□□□□ -0.42
HLA-C-201ENST00000376228 CD164Q04900 197 aa12.44□□□□□ -0.42
HLA-C-201ENST00000376228 HIST1H4AP62805 103 aaKnown RBP12.42□□□□□ -0.42
HLA-C-201ENST00000376228 PCP4P48539 62 aa12.42□□□□□ -0.42
HLA-C-201ENST00000376228 A0A087X002 238 aa12.4□□□□□ -0.42
HLA-C-201ENST00000376228 KRTAP13-2Q52LG2 175 aa12.4□□□□□ -0.42
HLA-C-201ENST00000376228 TNXBP22105 4242 aa12.39□□□□□ -0.43
HLA-C-201ENST00000376228 FAM236AA0A1B0GUQ0 79 aa12.39□□□□□ -0.43
HLA-C-201ENST00000376228 FAM236BA0A1B0GV22 79 aa12.39□□□□□ -0.43
HLA-C-201ENST00000376228 SS18L2Q9UHA2 77 aa12.39□□□□□ -0.43
HLA-C-201ENST00000376228 LINC00472Q9H8W2 130 aa12.38□□□□□ -0.43
HLA-C-201ENST00000376228 A0A087WVE0 104 aa12.37□□□□□ -0.43
HLA-C-201ENST00000376228 DSCR10P59022 87 aa12.36□□□□□ -0.43
HLA-C-201ENST00000376228 IGKV4-1P06312 121 aa12.35□□□□□ -0.43
HLA-C-201ENST00000376228 J3KT08 172 aa12.32□□□□□ -0.44
HLA-C-201ENST00000376228 HRCT1Q6UXD1 115 aa12.32□□□□□ -0.44
HLA-C-201ENST00000376228 HMCN2Q8NDA2 5059 aa12.31□□□□□ -0.44
HLA-C-201ENST00000376228 ATOX1O00244 68 aa12.29□□□□□ -0.44
HLA-C-201ENST00000376228 Q96NJ1 140 aa12.29□□□□□ -0.44
HLA-C-201ENST00000376228 ASB16-AS1Q495Z4 193 aa12.28□□□□□ -0.44
HLA-C-201ENST00000376228 Q8N9L7 120 aa12.28□□□□□ -0.44
HLA-C-201ENST00000376228 Q5XG85 94 aa12.27□□□□□ -0.44
HLA-C-201ENST00000376228 ANAPC13Q9BS18 74 aa12.27□□□□□ -0.44
HLA-C-201ENST00000376228 KRTAP10-8P60410 259 aa12.27□□□□□ -0.45
HLA-C-201ENST00000376228 DEFB116Q30KQ4 102 aa12.25□□□□□ -0.45
HLA-C-201ENST00000376228 TYMSOSQ8TAI1 123 aa12.25□□□□□ -0.45
HLA-C-201ENST00000376228 K7EQZ3 153 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms