RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 A0A1B0GWB2 263 aa4.45□□□□□ -1.7
HLA-DOA-202ENST00000374813 LINC00310P59036 64 aa4.45□□□□□ -1.7
HLA-DOA-202ENST00000374813 NOTCH2NLQ7Z3S9 236 aa4.45□□□□□ -1.7
HLA-DOA-202ENST00000374813 HSBP1O75506 76 aa4.44□□□□□ -1.7
HLA-DOA-202ENST00000374813 LINC00518Q8N0U6 118 aa4.44□□□□□ -1.7
HLA-DOA-202ENST00000374813 CLEC2BQ92478 149 aa4.44□□□□□ -1.7
HLA-DOA-202ENST00000374813 A4D1N5 150 aa4.43□□□□□ -1.7
HLA-DOA-202ENST00000374813 DPM2O94777 84 aa4.43□□□□□ -1.7
HLA-DOA-202ENST00000374813 GHRHP01286 108 aa4.43□□□□□ -1.7
HLA-DOA-202ENST00000374813 PLNP26678 52 aa4.43□□□□□ -1.7
HLA-DOA-202ENST00000374813 HERVK_113P61574 105 aa4.43□□□□□ -1.7
HLA-DOA-202ENST00000374813 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
HLA-DOA-202ENST00000374813 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
HLA-DOA-202ENST00000374813 NHP2Q9NX24 153 aaKnown RBP4.43□□□□□ -1.7
HLA-DOA-202ENST00000374813 IGKCP01834 107 aa4.42□□□□□ -1.7
HLA-DOA-202ENST00000374813 YPEL4Q96NS1 127 aa4.42□□□□□ -1.7
HLA-DOA-202ENST00000374813 TRAV13-2A0A0B4J235 113 aa4.41□□□□□ -1.7
HLA-DOA-202ENST00000374813 E9PLD3 99 aa4.41□□□□□ -1.7
HLA-DOA-202ENST00000374813 LEPROTL1O95214 131 aa4.41□□□□□ -1.7
HLA-DOA-202ENST00000374813 FABP4P15090 132 aa4.4□□□□□ -1.71
HLA-DOA-202ENST00000374813 TTTY13Q9BZ97 58 aa4.4□□□□□ -1.71
HLA-DOA-202ENST00000374813 SS18L2Q9UHA2 77 aa4.4□□□□□ -1.71
HLA-DOA-202ENST00000374813 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.71
HLA-DOA-202ENST00000374813 SERF1AO75920 110 aa4.39□□□□□ -1.71
HLA-DOA-202ENST00000374813 OCIAD2Q56VL3 154 aa4.38□□□□□ -1.71
HLA-DOA-202ENST00000374813 SLC7A5P1Q8MH63 180 aa4.38□□□□□ -1.71
HLA-DOA-202ENST00000374813 TIMM17BO60830 172 aa4.37□□□□□ -1.71
HLA-DOA-202ENST00000374813 DSCR10P59022 87 aa4.36□□□□□ -1.71
HLA-DOA-202ENST00000374813 LINC00313P59037 77 aa4.36□□□□□ -1.71
HLA-DOA-202ENST00000374813 APOC3P02656 99 aa4.35□□□□□ -1.71
HLA-DOA-202ENST00000374813 HSPB8Q9UJY1 196 aa4.35□□□□□ -1.71
HLA-DOA-202ENST00000374813 A6NDN8 102 aa4.34□□□□□ -1.71
HLA-DOA-202ENST00000374813 TRGC2P03986 189 aa4.34□□□□□ -1.71
HLA-DOA-202ENST00000374813 ANKRD39Q53RE8 183 aa4.34□□□□□ -1.71
HLA-DOA-202ENST00000374813 SMIM11BQ8TCY0 68 aa4.34□□□□□ -1.71
HLA-DOA-202ENST00000374813 SCGB1D1O95968 90 aa4.33□□□□□ -1.72
HLA-DOA-202ENST00000374813 SPRR2EP22531 72 aa4.32□□□□□ -1.72
HLA-DOA-202ENST00000374813 SPRR2BP35325 72 aa4.32□□□□□ -1.72
HLA-DOA-202ENST00000374813 SPRR2AP35326 72 aa4.32□□□□□ -1.72
HLA-DOA-202ENST00000374813 Q6ZQY7 126 aa4.32□□□□□ -1.72
HLA-DOA-202ENST00000374813 COLCA2A8K830 154 aa4.31□□□□□ -1.72
HLA-DOA-202ENST00000374813 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
HLA-DOA-202ENST00000374813 VAMP3Q15836 100 aa4.31□□□□□ -1.72
HLA-DOA-202ENST00000374813 H3BUT2 72 aa4.3□□□□□ -1.72
HLA-DOA-202ENST00000374813 SNAPINO95295 136 aa4.3□□□□□ -1.72
HLA-DOA-202ENST00000374813 Q5VV11 94 aa4.3□□□□□ -1.72
HLA-DOA-202ENST00000374813 LINC00575Q6W349 94 aa4.3□□□□□ -1.72
HLA-DOA-202ENST00000374813 COPS9Q8WXC6 57 aa4.3□□□□□ -1.72
HLA-DOA-202ENST00000374813 FAM218AQ96MZ4 157 aa4.3□□□□□ -1.72
HLA-DOA-202ENST00000374813 SYS1-DBNDD2H3BUS1 97 aa4.29□□□□□ -1.72
HLA-DOA-202ENST00000374813 SPINK7P58062 85 aa4.29□□□□□ -1.72
HLA-DOA-202ENST00000374813 TEN1Q86WV5 123 aa4.29□□□□□ -1.72
HLA-DOA-202ENST00000374813 MUSTN1Q8IVN3 82 aa4.29□□□□□ -1.72
HLA-DOA-202ENST00000374813 SVBPQ8N300 66 aa4.29□□□□□ -1.72
HLA-DOA-202ENST00000374813 SNHG12Q9BXW3 62 aa4.29□□□□□ -1.72
HLA-DOA-202ENST00000374813 A0A1W2PNM2 257 aa4.28□□□□□ -1.72
HLA-DOA-202ENST00000374813 hADV29S1A0JD25 119 aa4.28□□□□□ -1.72
HLA-DOA-202ENST00000374813 LINC01545Q5VT33 79 aa4.28□□□□□ -1.72
HLA-DOA-202ENST00000374813 PPDPFLQ8WWR9 84 aa4.28□□□□□ -1.72
HLA-DOA-202ENST00000374813 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
HLA-DOA-202ENST00000374813 SIGMAR1Q99720 223 aa4.28□□□□□ -1.72
HLA-DOA-202ENST00000374813 A0A087WSZ3 146 aa4.26□□□□□ -1.73
HLA-DOA-202ENST00000374813 MT1BP07438 61 aa4.26□□□□□ -1.73
HLA-DOA-202ENST00000374813 SCGB1D4Q6XE38 83 aa4.26□□□□□ -1.73
HLA-DOA-202ENST00000374813 IFITM1P13164 125 aa4.25□□□□□ -1.73
HLA-DOA-202ENST00000374813 NDUFA5Q16718 116 aa4.24□□□□□ -1.73
HLA-DOA-202ENST00000374813 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.24□□□□□ -1.73
HLA-DOA-202ENST00000374813 WFDC13Q8IUB5 93 aa4.24□□□□□ -1.73
HLA-DOA-202ENST00000374813 IGKV4-1P06312 121 aa4.23□□□□□ -1.73
HLA-DOA-202ENST00000374813 ZCCHC13Q8WW36 166 aaKnown RBP4.23□□□□□ -1.73
HLA-DOA-202ENST00000374813 C3orf79P0CE67 100 aa4.22□□□□□ -1.73
HLA-DOA-202ENST00000374813 PET117Q6UWS5 81 aa4.22□□□□□ -1.73
HLA-DOA-202ENST00000374813 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
HLA-DOA-202ENST00000374813 H1FX-AS1Q4G0G2 97 aa4.21□□□□□ -1.74
HLA-DOA-202ENST00000374813 IGHV6-1A0A0B4J1U7 121 aa4.19□□□□□ -1.74
HLA-DOA-202ENST00000374813 SPRR2DP22532 72 aa4.19□□□□□ -1.74
HLA-DOA-202ENST00000374813 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
HLA-DOA-202ENST00000374813 ATOH7Q8N100 152 aa4.19□□□□□ -1.74
HLA-DOA-202ENST00000374813 IMUPQ9GZP8 106 aa4.19□□□□□ -1.74
HLA-DOA-202ENST00000374813 FAM236AA0A1B0GUQ0 79 aa4.18□□□□□ -1.74
HLA-DOA-202ENST00000374813 FAM236BA0A1B0GV22 79 aa4.18□□□□□ -1.74
HLA-DOA-202ENST00000374813 C12orf57Q99622 126 aa4.18□□□□□ -1.74
HLA-DOA-202ENST00000374813 HIST1H2BKO60814 126 aa4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 HIST1H2BJP06899 126 aa4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 HIST1H2BOP23527 126 aa4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 HIST1H2BBP33778 126 aa4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 HIST1H2BDP58876 126 aa4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 HIST1H2BCP62807 126 aa4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 HIST2H2BEQ16778 126 aa4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 HIST1H2BHQ93079 126 aa4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 HIST1H2BNQ99877 126 aa4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 HIST1H2BMQ99879 126 aa4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 SPRR2GQ9BYE4 73 aa4.17□□□□□ -1.74
HLA-DOA-202ENST00000374813 KRTDAPP60985 99 aa4.16□□□□□ -1.74
HLA-DOA-202ENST00000374813 DEFB116Q30KQ4 102 aa4.16□□□□□ -1.74
HLA-DOA-202ENST00000374813 C8orf87E5RJ46 101 aa4.15□□□□□ -1.75
HLA-DOA-202ENST00000374813 NDUFV3P56181 108 aaKnown RBP4.15□□□□□ -1.75
HLA-DOA-202ENST00000374813 SNCGO76070 127 aa4.14□□□□□ -1.75
HLA-DOA-202ENST00000374813 BVES-AS1Q5T3Y7 98 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms