RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SYCNQ0VAF6 134 aa3.07□□□□□ -1.92
USP48-202ENST00000374730 Q6ZQT0 140 aa3.07□□□□□ -1.92
USP48-202ENST00000374730 Q6ZQY7 126 aa3.07□□□□□ -1.92
USP48-202ENST00000374730 Q8NBF4 154 aa3.07□□□□□ -1.92
USP48-202ENST00000374730 RMI2Q96E14 147 aa3.07□□□□□ -1.92
USP48-202ENST00000374730 LYSTQ99698 3801 aa3.07□□□□□ -1.92
USP48-202ENST00000374730 UPK3BQ9BT76 320 aa3.07□□□□□ -1.92
USP48-202ENST00000374730 LINC00588Q9Y4M8 146 aa3.07□□□□□ -1.92
USP48-202ENST00000374730 STARD9Q9P2P6 4700 aa3.07□□□□□ -1.92
USP48-202ENST00000374730 EPPK1P58107 5090 aaKnown RBP3.06□□□□□ -1.92
USP48-202ENST00000374730 A8MU10 97 aa3.06□□□□□ -1.92
USP48-202ENST00000374730 ATOX1O00244 68 aa3.06□□□□□ -1.92
USP48-202ENST00000374730 RBM3P98179 157 aaKnown RBP3.06□□□□□ -1.92
USP48-202ENST00000374730 Q6ZR54 194 aa3.06□□□□□ -1.92
USP48-202ENST00000374730 MRAPQ8TCY5 172 aa3.06□□□□□ -1.92
USP48-202ENST00000374730 HECTD4Q9Y4D8 3996 aa3.06□□□□□ -1.92
USP48-202ENST00000374730 COL7A1Q02388 2944 aa3.06□□□□□ -1.92
USP48-202ENST00000374730 IGKV3D-7A0A0C4DH55 119 aa3.05□□□□□ -1.92
USP48-202ENST00000374730 TRBV7-4A0A0J9YYF1 115 aa3.05□□□□□ -1.92
USP48-202ENST00000374730 UQCRQO14949 82 aa3.05□□□□□ -1.92
USP48-202ENST00000374730 DSCR8Q96T75 97 aa3.05□□□□□ -1.92
USP48-202ENST00000374730 UBL5Q9BZL1 73 aa3.05□□□□□ -1.92
USP48-202ENST00000374730 KCNQ1DNQ9H478 68 aa3.05□□□□□ -1.92
USP48-202ENST00000374730 LAMTOR3Q9UHA4 124 aa3.05□□□□□ -1.92
USP48-202ENST00000374730 DNAH8Q96JB1 4490 aa3.04□□□□□ -1.92
USP48-202ENST00000374730 COX7CP15954 63 aa3.04□□□□□ -1.92
USP48-202ENST00000374730 KRTAP12-2P59991 146 aa3.04□□□□□ -1.92
USP48-202ENST00000374730 C3orf22Q8N5N4 141 aa3.04□□□□□ -1.92
USP48-202ENST00000374730 NKAPP1Q8N9T2 125 aa3.04□□□□□ -1.92
USP48-202ENST00000374730 C7orf33Q8WU49 177 aa3.04□□□□□ -1.92
USP48-202ENST00000374730 STAB2Q8WWQ8 2551 aa3.03□□□□□ -1.92
USP48-202ENST00000374730 SPRR1AP35321 89 aa3.03□□□□□ -1.92
USP48-202ENST00000374730 V9GYY9 64 aa3.03□□□□□ -1.92
USP48-202ENST00000374730 MGAM2Q2M2H8 2515 aa3.03□□□□□ -1.92
USP48-202ENST00000374730 CSMD3Q7Z407 3707 aa3.03□□□□□ -1.92
USP48-202ENST00000374730 PCLOQ9Y6V0 5065 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 A0A087WVE0 104 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 LOC107984640A0A0U1RRK4 108 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 RPL37AP8A6NKH3 93 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 KRTAP4-16G5E9R7 235 aaPredicted RBP3.02□□□□□ -1.93
USP48-202ENST00000374730 M0R2N4 97 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 BCE1O60756 84 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 PRB2P02812 416 aaPredicted RBP3.02□□□□□ -1.93
USP48-202ENST00000374730 KRTAP1-4P0C5Y4 121 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 CRYGAP11844 174 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 CXCL6P80162 114 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 PRR4Q16378 134 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 CASC10Q5T4H9 136 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 C9orf153Q5TBE3 101 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 SERP2Q8N6R1 65 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 DHRS4-AS1Q9P1J3 65 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 DNAH11Q96DT5 4516 aa3.02□□□□□ -1.93
USP48-202ENST00000374730 IGLV1-50A0A075B6I6 118 aa3.01□□□□□ -1.93
USP48-202ENST00000374730 IGLV5-48A0A075B6I7 105 aa3.01□□□□□ -1.93
USP48-202ENST00000374730 A0A1B0GW54 56 aa3.01□□□□□ -1.93
USP48-202ENST00000374730 CNBPP62633 177 aaKnown RBP3.01□□□□□ -1.93
USP48-202ENST00000374730 C5orf47Q569G3 176 aa3.01□□□□□ -1.93
USP48-202ENST00000374730 Q6ZRX8 168 aa3.01□□□□□ -1.93
USP48-202ENST00000374730 SS18L2Q9UHA2 77 aa3.01□□□□□ -1.93
USP48-202ENST00000374730 RYR1P21817 5038 aa3.01□□□□□ -1.93
USP48-202ENST00000374730 HYDINQ4G0P3 5121 aa3.01□□□□□ -1.93
USP48-202ENST00000374730 DNAH5Q8TE73 4624 aa3□□□□□ -1.93
USP48-202ENST00000374730 ETDCA0A1B0GVM5 59 aa3□□□□□ -1.93
USP48-202ENST00000374730 KRTAP13-3Q3SY46 172 aa3□□□□□ -1.93
USP48-202ENST00000374730 FAM19A1Q7Z5A9 133 aa3□□□□□ -1.93
USP48-202ENST00000374730 MRPL55Q7Z7F7 128 aaKnown RBP3□□□□□ -1.93
USP48-202ENST00000374730 APLNQ9ULZ1 77 aa3□□□□□ -1.93
USP48-202ENST00000374730 ALMS1Q8TCU4 4167 aa3□□□□□ -1.93
USP48-202ENST00000374730 FAM168BA1KXE4 195 aa2.99□□□□□ -1.93
USP48-202ENST00000374730 OXTP01178 125 aa2.99□□□□□ -1.93
USP48-202ENST00000374730 HAMPP81172 84 aa2.99□□□□□ -1.93
USP48-202ENST00000374730 SMIM20Q8N5G0 67 aa2.99□□□□□ -1.93
USP48-202ENST00000374730 B9D2Q9BPU9 175 aa2.99□□□□□ -1.93
USP48-202ENST00000374730 Q9BRP9 147 aa2.99□□□□□ -1.93
USP48-202ENST00000374730 PKIGQ9Y2B9 76 aa2.99□□□□□ -1.93
USP48-202ENST00000374730 FRAS1Q86XX4 4008 aa2.98□□□□□ -1.93
USP48-202ENST00000374730 TRAV7A0A075B6U4 112 aa2.98□□□□□ -1.93
USP48-202ENST00000374730 C16orf90A8MZG2 172 aa2.98□□□□□ -1.93
USP48-202ENST00000374730 REG3GQ6UW15 175 aa2.98□□□□□ -1.93
USP48-202ENST00000374730 FAM19A5Q7Z5A7 132 aaPredicted RBP2.98□□□□□ -1.93
USP48-202ENST00000374730 UBE2DNLQ8IWF7 75 aa2.98□□□□□ -1.93
USP48-202ENST00000374730 A0A096LNI7 61 aa2.97□□□□□ -1.93
USP48-202ENST00000374730 TMEM258P61165 79 aa2.97□□□□□ -1.93
USP48-202ENST00000374730 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
USP48-202ENST00000374730 TENM2Q9NT68 2774 aa2.96□□□□□ -1.94
USP48-202ENST00000374730 NUPR2A6NF83 97 aa2.96□□□□□ -1.94
USP48-202ENST00000374730 PSCAO43653 123 aa2.96□□□□□ -1.94
USP48-202ENST00000374730 FUSP35637 526 aaKnown RBP eCLIP2.96□□□□□ -1.94
USP48-202ENST00000374730 UBE2BP63146 152 aa2.96□□□□□ -1.94
USP48-202ENST00000374730 DEFB105AQ8NG35 78 aa2.96□□□□□ -1.94
USP48-202ENST00000374730 SPRR4Q96PI1 79 aa2.96□□□□□ -1.94
USP48-202ENST00000374730 IGLV8-61A0A075B6I0 122 aa2.95□□□□□ -1.94
USP48-202ENST00000374730 NBDYA0A0U1RRE5 68 aa2.95□□□□□ -1.94
USP48-202ENST00000374730 A0A1W2PNM2 257 aa2.95□□□□□ -1.94
USP48-202ENST00000374730 H0Y9J4 135 aa2.95□□□□□ -1.94
USP48-202ENST00000374730 ERC2-IT1O76042 136 aa2.95□□□□□ -1.94
USP48-202ENST00000374730 IGKV4-1P06312 121 aa2.95□□□□□ -1.94
USP48-202ENST00000374730 NREPQ16612 68 aa2.95□□□□□ -1.94
USP48-202ENST00000374730 C1orf137Q5JT78 98 aa2.95□□□□□ -1.94
USP48-202ENST00000374730 SCXQ7RTU7 201 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms