RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 TRRAPQ9Y4A5 3859 aa5.34□□□□□ -1.55
GARNL3-201ENST00000373386 A0A1W2PNM2 257 aa5.34□□□□□ -1.56
GARNL3-201ENST00000373386 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.34□□□□□ -1.56
GARNL3-201ENST00000373386 VWFP04275 2813 aa5.34□□□□□ -1.56
GARNL3-201ENST00000373386 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.33□□□□□ -1.56
GARNL3-201ENST00000373386 ETDCA0A1B0GVM5 59 aa5.33□□□□□ -1.56
GARNL3-201ENST00000373386 SPINK7P58062 85 aa5.33□□□□□ -1.56
GARNL3-201ENST00000373386 PLAC8Q9NZF1 115 aa5.33□□□□□ -1.56
GARNL3-201ENST00000373386 COX7BP24311 80 aa5.32□□□□□ -1.56
GARNL3-201ENST00000373386 SMIM29Q86T20 159 aa5.32□□□□□ -1.56
GARNL3-201ENST00000373386 SPAG11AQ6PDA7 123 aa5.32□□□□□ -1.56
GARNL3-201ENST00000373386 ATRQ13535 2644 aa5.31□□□□□ -1.56
GARNL3-201ENST00000373386 DEFB4AO15263 64 aa5.31□□□□□ -1.56
GARNL3-201ENST00000373386 EGFEM1PQ0D2K5 195 aa5.31□□□□□ -1.56
GARNL3-201ENST00000373386 KRTAP26-1Q6PEX3 210 aa5.31□□□□□ -1.56
GARNL3-201ENST00000373386 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
GARNL3-201ENST00000373386 KLK12Q9UKR0 248 aa5.31□□□□□ -1.56
GARNL3-201ENST00000373386 Q6ZR54 194 aa5.3□□□□□ -1.56
GARNL3-201ENST00000373386 Q8N9L7 120 aa5.3□□□□□ -1.56
GARNL3-201ENST00000373386 CNBPP62633 177 aaKnown RBP5.29□□□□□ -1.56
GARNL3-201ENST00000373386 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
GARNL3-201ENST00000373386 CMYA5Q8N3K9 4069 aa5.28□□□□□ -1.56
GARNL3-201ENST00000373386 IGLV9-49A0A0B4J1Y8 123 aa5.28□□□□□ -1.56
GARNL3-201ENST00000373386 HTN3P15516 51 aa5.28□□□□□ -1.56
GARNL3-201ENST00000373386 TNP2Q05952 138 aa5.28□□□□□ -1.56
GARNL3-201ENST00000373386 LINC01556Q5JQF7 62 aa5.28□□□□□ -1.56
GARNL3-201ENST00000373386 COA5Q86WW8 74 aa5.28□□□□□ -1.56
GARNL3-201ENST00000373386 KPRPQ5T749 579 aaPredicted RBP5.27□□□□□ -1.57
GARNL3-201ENST00000373386 CAMK2N2Q96S95 79 aa5.27□□□□□ -1.57
GARNL3-201ENST00000373386 H0Y9P7 68 aa5.26□□□□□ -1.57
GARNL3-201ENST00000373386 PLA2G2DQ9UNK4 145 aa5.26□□□□□ -1.57
GARNL3-201ENST00000373386 STAB1Q9NY15 2570 aa5.26□□□□□ -1.57
GARNL3-201ENST00000373386 TLX1NBP0CAT3 122 aa5.26□□□□□ -1.57
GARNL3-201ENST00000373386 LINC00528Q8N1L1 170 aa5.26□□□□□ -1.57
GARNL3-201ENST00000373386 C15orf56Q8N910 161 aa5.26□□□□□ -1.57
GARNL3-201ENST00000373386 REG3GQ6UW15 175 aa5.25□□□□□ -1.57
GARNL3-201ENST00000373386 KCNQ1DNQ9H478 68 aa5.25□□□□□ -1.57
GARNL3-201ENST00000373386 PKD1L1Q8TDX9 2849 aa5.25□□□□□ -1.57
GARNL3-201ENST00000373386 ST20-AS1Q8NBB2 130 aa5.24□□□□□ -1.57
GARNL3-201ENST00000373386 DNAH10OSP0CZ25 163 aa5.24□□□□□ -1.57
GARNL3-201ENST00000373386 WFDC10BQ8IUB3 73 aa5.24□□□□□ -1.57
GARNL3-201ENST00000373386 COL6A5A8TX70 2615 aa5.24□□□□□ -1.57
GARNL3-201ENST00000373386 KRTAP10-11P60412 298 aa5.23□□□□□ -1.57
GARNL3-201ENST00000373386 DNAH3Q8TD57 4116 aa5.23□□□□□ -1.57
GARNL3-201ENST00000373386 H3BPC8 53 aa5.23□□□□□ -1.57
GARNL3-201ENST00000373386 ANK2Q01484 3957 aa5.23□□□□□ -1.57
GARNL3-201ENST00000373386 IGLV5-37A0A075B6J1 123 aa5.23□□□□□ -1.57
GARNL3-201ENST00000373386 KRTAP24-1Q3LI83 254 aa5.22□□□□□ -1.57
GARNL3-201ENST00000373386 CHTF8P0CG12 524 aa5.21□□□□□ -1.58
GARNL3-201ENST00000373386 P0C880 135 aa5.2□□□□□ -1.58
GARNL3-201ENST00000373386 DEFB131BA0A096LNP1 70 aa5.19□□□□□ -1.58
GARNL3-201ENST00000373386 IGLV5-48A0A075B6I7 105 aa5.18□□□□□ -1.58
GARNL3-201ENST00000373386 DHRS4-AS1Q9P1J3 65 aa5.18□□□□□ -1.58
GARNL3-201ENST00000373386 SPRR1AP35321 89 aa5.17□□□□□ -1.58
GARNL3-201ENST00000373386 Q8N377 158 aa5.17□□□□□ -1.58
GARNL3-201ENST00000373386 DNHD1Q96M86 4753 aa5.17□□□□□ -1.58
GARNL3-201ENST00000373386 KRTAP4-16G5E9R7 235 aaPredicted RBP5.16□□□□□ -1.58
GARNL3-201ENST00000373386 LUZP6Q538Z0 58 aa5.16□□□□□ -1.58
GARNL3-201ENST00000373386 DEFB105AQ8NG35 78 aa5.16□□□□□ -1.58
GARNL3-201ENST00000373386 C7orf33Q8WU49 177 aa5.16□□□□□ -1.58
GARNL3-201ENST00000373386 DNAH1Q9P2D7 4330 aa5.16□□□□□ -1.58
GARNL3-201ENST00000373386 IGKV2D-24A0A075B6R9 120 aa5.16□□□□□ -1.58
GARNL3-201ENST00000373386 A8MWP4 228 aa5.15□□□□□ -1.58
GARNL3-201ENST00000373386 IGLV7-46A0A075B6I9 117 aa5.14□□□□□ -1.59
GARNL3-201ENST00000373386 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
GARNL3-201ENST00000373386 Q6ZRX8 168 aa5.14□□□□□ -1.59
GARNL3-201ENST00000373386 NBEAL2Q6ZNJ1 2754 aa5.14□□□□□ -1.59
GARNL3-201ENST00000373386 IGLV1-50A0A075B6I6 118 aa5.14□□□□□ -1.59
GARNL3-201ENST00000373386 LINC00483Q53H64 154 aa5.14□□□□□ -1.59
GARNL3-201ENST00000373386 C8orf17Q9NRJ1 99 aa5.14□□□□□ -1.59
GARNL3-201ENST00000373386 SPATA8Q6RVD6 105 aa5.14□□□□□ -1.59
GARNL3-201ENST00000373386 C9orf163Q8N9P6 203 aa5.14□□□□□ -1.59
GARNL3-201ENST00000373386 K7ERS5 55 aa5.13□□□□□ -1.59
GARNL3-201ENST00000373386 C1orf137Q5JT78 98 aa5.12□□□□□ -1.59
GARNL3-201ENST00000373386 Q8NBF4 154 aa5.12□□□□□ -1.59
GARNL3-201ENST00000373386 C20orf166-AS1Q96NR2 134 aa5.11□□□□□ -1.59
GARNL3-201ENST00000373386 SPRR4Q96PI1 79 aa5.11□□□□□ -1.59
GARNL3-201ENST00000373386 NBEAL1Q6ZS30 2694 aa5.11□□□□□ -1.59
GARNL3-201ENST00000373386 NOTCH1P46531 2555 aa5.1□□□□□ -1.59
GARNL3-201ENST00000373386 RPL37AP8A6NKH3 93 aa5.1□□□□□ -1.59
GARNL3-201ENST00000373386 FAM168BA1KXE4 195 aa5.08□□□□□ -1.6
GARNL3-201ENST00000373386 DSCR10P59022 87 aa5.08□□□□□ -1.6
GARNL3-201ENST00000373386 KRTAP7-1Q8IUC3 87 aa5.08□□□□□ -1.6
GARNL3-201ENST00000373386 A0A087WSZ3 146 aa5.07□□□□□ -1.6
GARNL3-201ENST00000373386 MGAM2Q2M2H8 2515 aa5.07□□□□□ -1.6
GARNL3-201ENST00000373386 IGLV8-61A0A075B6I0 122 aa5.07□□□□□ -1.6
GARNL3-201ENST00000373386 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
GARNL3-201ENST00000373386 ZNF861PO60384 105 aa5.07□□□□□ -1.6
GARNL3-201ENST00000373386 K7EQZ3 153 aa5.06□□□□□ -1.6
GARNL3-201ENST00000373386 UQCR11O14957 56 aa5.06□□□□□ -1.6
GARNL3-201ENST00000373386 C14orf177Q52M58 125 aa5.05□□□□□ -1.6
GARNL3-201ENST00000373386 K7EIL1 84 aa5.04□□□□□ -1.6
GARNL3-201ENST00000373386 CASC10Q5T4H9 136 aa5.04□□□□□ -1.6
GARNL3-201ENST00000373386 DYNC2H1Q8NCM8 4307 aaKnown RBP5.04□□□□□ -1.6
GARNL3-201ENST00000373386 HUWE1Q7Z6Z7 4374 aaKnown RBP5.03□□□□□ -1.6
GARNL3-201ENST00000373386 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.03□□□□□ -1.6
GARNL3-201ENST00000373386 DMAC1Q96GE9 116 aa5.02□□□□□ -1.61
GARNL3-201ENST00000373386 SPRR1BP22528 89 aa5.02□□□□□ -1.61
GARNL3-201ENST00000373386 TENM3Q9P273 2699 aa5.02□□□□□ -1.61
GARNL3-201ENST00000373386 IGFL1Q6UW32 110 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms