RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 UBE2AP49459 152 aa11.63□□□□□ -0.55
USP49-202ENST00000373010 PKIGQ9Y2B9 76 aa11.63□□□□□ -0.55
USP49-202ENST00000373010 TMEM258P61165 79 aa11.62□□□□□ -0.55
USP49-202ENST00000373010 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.62□□□□□ -0.55
USP49-202ENST00000373010 H0Y9J4 135 aa11.61□□□□□ -0.55
USP49-202ENST00000373010 A0A087WTM6 91 aa11.6□□□□□ -0.55
USP49-202ENST00000373010 IGLV8-61A0A075B6I0 122 aa11.6□□□□□ -0.55
USP49-202ENST00000373010 SNURFQ9Y675 71 aa11.59□□□□□ -0.55
USP49-202ENST00000373010 DSCR10P59022 87 aa11.58□□□□□ -0.56
USP49-202ENST00000373010 SPACA4Q8TDM5 124 aa11.58□□□□□ -0.56
USP49-202ENST00000373010 DNHD1Q96M86 4753 aa11.57□□□□□ -0.56
USP49-202ENST00000373010 SPRR1BP22528 89 aa11.56□□□□□ -0.56
USP49-202ENST00000373010 A0A087WSZ3 146 aa11.55□□□□□ -0.56
USP49-202ENST00000373010 KLKP1Q107X0 134 aa11.54□□□□□ -0.56
USP49-202ENST00000373010 K7EQZ3 153 aa11.54□□□□□ -0.56
USP49-202ENST00000373010 DEFB116Q30KQ4 102 aa11.54□□□□□ -0.56
USP49-202ENST00000373010 Q6ZR54 194 aa11.54□□□□□ -0.56
USP49-202ENST00000373010 KRTAP13-1Q8IUC0 172 aa11.54□□□□□ -0.56
USP49-202ENST00000373010 OCR1Q9BZK8 76 aa11.53□□□□□ -0.56
USP49-202ENST00000373010 H7BZZ5 65 aa11.52□□□□□ -0.57
USP49-202ENST00000373010 RTL8CO15255 209 aa11.52□□□□□ -0.57
USP49-202ENST00000373010 KMT2AQ03164 3969 aa11.52□□□□□ -0.57
USP49-202ENST00000373010 J3KT08 172 aa11.51□□□□□ -0.57
USP49-202ENST00000373010 HECTD4Q9Y4D8 3996 aa11.5□□□□□ -0.57
USP49-202ENST00000373010 DNAH2Q9P225 4427 aa11.49□□□□□ -0.57
USP49-202ENST00000373010 TMEM254Q8TBM7 123 aa11.47□□□□□ -0.57
USP49-202ENST00000373010 FAM30AQ9NZY2 134 aa11.47□□□□□ -0.57
USP49-202ENST00000373010 TGP01266 2768 aa11.46□□□□□ -0.58
USP49-202ENST00000373010 RPS28P62857 69 aaKnown RBP11.46□□□□□ -0.58
USP49-202ENST00000373010 DNAH17Q9UFH2 4485 aa11.45□□□□□ -0.58
USP49-202ENST00000373010 FBN3Q75N90 2809 aa11.44□□□□□ -0.58
USP49-202ENST00000373010 FAM236DA0A1B0GTK5 79 aa11.44□□□□□ -0.58
USP49-202ENST00000373010 FAM236CP0DP71 79 aa11.44□□□□□ -0.58
USP49-202ENST00000373010 OXTP01178 125 aa11.43□□□□□ -0.58
USP49-202ENST00000373010 RPL37AP61513 92 aaKnown RBP11.43□□□□□ -0.58
USP49-202ENST00000373010 C1orf134Q5TEV5 83 aa11.43□□□□□ -0.58
USP49-202ENST00000373010 LY6G6CO95867 125 aa11.41□□□□□ -0.58
USP49-202ENST00000373010 PSORS1C2Q9UIG4 136 aa11.41□□□□□ -0.58
USP49-202ENST00000373010 IGLV5-52A0A0A0MRZ9 124 aa11.4□□□□□ -0.58
USP49-202ENST00000373010 HCG22E2RYF7 251 aa11.4□□□□□ -0.58
USP49-202ENST00000373010 IGLV9-49A0A0B4J1Y8 123 aa11.39□□□□□ -0.59
USP49-202ENST00000373010 A0A0U1RQV1 116 aa11.39□□□□□ -0.59
USP49-202ENST00000373010 PLAC8Q9NZF1 115 aa11.39□□□□□ -0.59
USP49-202ENST00000373010 NDUFC1O43677 76 aa11.37□□□□□ -0.59
USP49-202ENST00000373010 WFDC13Q8IUB5 93 aa11.37□□□□□ -0.59
USP49-202ENST00000373010 LINC00472Q9H8W2 130 aa11.35□□□□□ -0.59
USP49-202ENST00000373010 DNAH8Q96JB1 4490 aa11.34□□□□□ -0.59
USP49-202ENST00000373010 LINC00483Q53H64 154 aa11.34□□□□□ -0.59
USP49-202ENST00000373010 ANAPC11Q9NYG5 84 aa11.32□□□□□ -0.6
USP49-202ENST00000373010 LCE6AA0A183 80 aa11.31□□□□□ -0.6
USP49-202ENST00000373010 ZNF861PO60384 105 aa11.29□□□□□ -0.6
USP49-202ENST00000373010 HRCT1Q6UXD1 115 aa11.29□□□□□ -0.6
USP49-202ENST00000373010 ZNF706Q9Y5V0 76 aaPredicted RBP11.29□□□□□ -0.6
USP49-202ENST00000373010 PRR15Q8IV56 129 aa11.29□□□□□ -0.6
USP49-202ENST00000373010 A8MWP4 228 aa11.28□□□□□ -0.6
USP49-202ENST00000373010 WWC2-AS2Q96NR7 200 aa11.28□□□□□ -0.6
USP49-202ENST00000373010 SERP1Q9Y6X1 66 aa11.28□□□□□ -0.6
USP49-202ENST00000373010 FRAS1Q86XX4 4008 aa11.28□□□□□ -0.6
USP49-202ENST00000373010 KRTAP29-1A8MX34 341 aaPredicted RBP11.27□□□□□ -0.6
USP49-202ENST00000373010 MOBPQ13875 183 aa11.26□□□□□ -0.61
USP49-202ENST00000373010 KRTAP10-2P60368 255 aa11.25□□□□□ -0.61
USP49-202ENST00000373010 CASC2Q6XLA1 102 aa11.24□□□□□ -0.61
USP49-202ENST00000373010 C5orf47Q569G3 176 aa11.23□□□□□ -0.61
USP49-202ENST00000373010 Q96NJ1 140 aa11.23□□□□□ -0.61
USP49-202ENST00000373010 DNAH6Q9C0G6 4158 aa11.22□□□□□ -0.61
USP49-202ENST00000373010 ATP5EP56381 51 aaPredicted RBP11.21□□□□□ -0.61
USP49-202ENST00000373010 ZCCHC13Q8WW36 166 aaKnown RBP11.21□□□□□ -0.61
USP49-202ENST00000373010 IGLV7-43P04211 117 aa11.2□□□□□ -0.62
USP49-202ENST00000373010 DNAH5Q8TE73 4624 aa11.19□□□□□ -0.62
USP49-202ENST00000373010 CIRBP-AS1Q8TBR5 109 aa11.18□□□□□ -0.62
USP49-202ENST00000373010 DNAH11Q96DT5 4516 aa11.18□□□□□ -0.62
USP49-202ENST00000373010 MMP24-AS1A0A0U1RRL7 71 aa11.17□□□□□ -0.62
USP49-202ENST00000373010 Q5XG85 94 aa11.16□□□□□ -0.62
USP49-202ENST00000373010 NDUFB1O75438 58 aa11.15□□□□□ -0.62
USP49-202ENST00000373010 ALMS1Q8TCU4 4167 aa11.13□□□□□ -0.63
USP49-202ENST00000373010 HYDINQ4G0P3 5121 aa11.13□□□□□ -0.63
USP49-202ENST00000373010 MP68P56378 58 aa11.12□□□□□ -0.63
USP49-202ENST00000373010 C4orf26Q17RF5 130 aa11.12□□□□□ -0.63
USP49-202ENST00000373010 hDV103S1A0JD37 113 aa11.1□□□□□ -0.63
USP49-202ENST00000373010 LINC00208Q96KT6 92 aa11.1□□□□□ -0.63
USP49-202ENST00000373010 KRTAP10-1P60331 282 aa11.1□□□□□ -0.63
USP49-202ENST00000373010 H0Y9P7 68 aa11.09□□□□□ -0.63
USP49-202ENST00000373010 PKD1P98161 4303 aa11.08□□□□□ -0.64
USP49-202ENST00000373010 IGHV6-1A0A0B4J1U7 121 aa11.07□□□□□ -0.64
USP49-202ENST00000373010 C8orf17Q9NRJ1 99 aa11.06□□□□□ -0.64
USP49-202ENST00000373010 SMIM26A0A096LP01 95 aa11.06□□□□□ -0.64
USP49-202ENST00000373010 FAM229BQ4G0N7 80 aa11.06□□□□□ -0.64
USP49-202ENST00000373010 FP248Q71RG6 208 aaPredicted RBP11.06□□□□□ -0.64
USP49-202ENST00000373010 TRAV22A0A0B4J277 110 aa11.05□□□□□ -0.64
USP49-202ENST00000373010 A0A1B0GVX0 72 aa11.05□□□□□ -0.64
USP49-202ENST00000373010 Q6ZSA8 131 aa11.05□□□□□ -0.64
USP49-202ENST00000373010 PRR4Q16378 134 aa11.04□□□□□ -0.64
USP49-202ENST00000373010 ASB16-AS1Q495Z4 193 aa11.04□□□□□ -0.64
USP49-202ENST00000373010 FAT2Q9NYQ8 4349 aa11.03□□□□□ -0.64
USP49-202ENST00000373010 CDK2AP2O75956 126 aa11.03□□□□□ -0.64
USP49-202ENST00000373010 KRTAP21-3Q3LHN1 58 aa11.01□□□□□ -0.65
USP49-202ENST00000373010 A0A087X002 238 aa11□□□□□ -0.65
USP49-202ENST00000373010 SPINK6Q6UWN8 80 aa11□□□□□ -0.65
USP49-202ENST00000373010 NOTCH2NLQ7Z3S9 236 aa11□□□□□ -0.65
USP49-202ENST00000373010 LRP1BQ9NZR2 4599 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms