RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 LINC01547P58512 204 aaPredicted RBP11.65□□□□□ -0.54
VEGFA-206ENST00000372077 A0A1W2PNN7 141 aa11.64□□□□□ -0.55
VEGFA-206ENST00000372077 PKD1P98161 4303 aa11.64□□□□□ -0.55
VEGFA-206ENST00000372077 SPACA4Q8TDM5 124 aa11.64□□□□□ -0.55
VEGFA-206ENST00000372077 SNURFQ9Y675 71 aa11.64□□□□□ -0.55
VEGFA-206ENST00000372077 NKAPP1Q8N9T2 125 aa11.63□□□□□ -0.55
VEGFA-206ENST00000372077 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.63□□□□□ -0.55
VEGFA-206ENST00000372077 DNAH5Q8TE73 4624 aa11.62□□□□□ -0.55
VEGFA-206ENST00000372077 A0A1B0GVY2 172 aa11.62□□□□□ -0.55
VEGFA-206ENST00000372077 H7BZZ5 65 aa11.62□□□□□ -0.55
VEGFA-206ENST00000372077 C7orf33Q8WU49 177 aa11.61□□□□□ -0.55
VEGFA-206ENST00000372077 A0A0G2JQZ4 141 aa11.6□□□□□ -0.55
VEGFA-206ENST00000372077 ELOF1P60002 83 aaKnown RBP11.58□□□□□ -0.56
VEGFA-206ENST00000372077 MRPL55Q7Z7F7 128 aaKnown RBP11.58□□□□□ -0.56
VEGFA-206ENST00000372077 KRTAP10-1P60331 282 aa11.56□□□□□ -0.56
VEGFA-206ENST00000372077 ATP5EP2Q5VTU8 51 aa11.56□□□□□ -0.56
VEGFA-206ENST00000372077 ST20-AS1Q8NBB2 130 aa11.55□□□□□ -0.56
VEGFA-206ENST00000372077 BPY2O14599 106 aa11.55□□□□□ -0.56
VEGFA-206ENST00000372077 DNAH8Q96JB1 4490 aa11.55□□□□□ -0.56
VEGFA-206ENST00000372077 IGLV1-50A0A075B6I6 118 aa11.55□□□□□ -0.56
VEGFA-206ENST00000372077 PLAC8Q9NZF1 115 aa11.54□□□□□ -0.56
VEGFA-206ENST00000372077 Q6ZSA8 131 aa11.54□□□□□ -0.56
VEGFA-206ENST00000372077 KCNQ1DNQ9H478 68 aa11.53□□□□□ -0.56
VEGFA-206ENST00000372077 FAM30AQ9NZY2 134 aa11.53□□□□□ -0.56
VEGFA-206ENST00000372077 PHF5AQ7RTV0 110 aaKnown RBP11.52□□□□□ -0.56
VEGFA-206ENST00000372077 LINC00528Q8N1L1 170 aa11.52□□□□□ -0.56
VEGFA-206ENST00000372077 LOC110117498A0A087WWA1 95 aa11.52□□□□□ -0.57
VEGFA-206ENST00000372077 TRBV7-6A0A0J9YX20 115 aa11.52□□□□□ -0.57
VEGFA-206ENST00000372077 RYR3Q15413 4870 aa11.51□□□□□ -0.57
VEGFA-206ENST00000372077 F8WEM9 126 aa11.49□□□□□ -0.57
VEGFA-206ENST00000372077 PRYO14603 147 aa11.49□□□□□ -0.57
VEGFA-206ENST00000372077 TRBV7-4A0A0J9YYF1 115 aa11.48□□□□□ -0.57
VEGFA-206ENST00000372077 MPLKIPQ8TAP9 179 aa11.47□□□□□ -0.57
VEGFA-206ENST00000372077 TRAV7A0A075B6U4 112 aa11.47□□□□□ -0.57
VEGFA-206ENST00000372077 SPRR1AP35321 89 aa11.47□□□□□ -0.57
VEGFA-206ENST00000372077 PMAIP1Q13794 54 aa11.47□□□□□ -0.57
VEGFA-206ENST00000372077 ERC2-IT1O76042 136 aa11.46□□□□□ -0.57
VEGFA-206ENST00000372077 KRTAP11-1Q8IUC1 163 aa11.46□□□□□ -0.57
VEGFA-206ENST00000372077 KLKP1Q107X0 134 aa11.46□□□□□ -0.58
VEGFA-206ENST00000372077 Q8N377 158 aa11.45□□□□□ -0.58
VEGFA-206ENST00000372077 CIRBP-AS1Q8TBR5 109 aa11.45□□□□□ -0.58
VEGFA-206ENST00000372077 UBE2BP63146 152 aa11.45□□□□□ -0.58
VEGFA-206ENST00000372077 DEFB116Q30KQ4 102 aa11.45□□□□□ -0.58
VEGFA-206ENST00000372077 KRTAP4-16G5E9R7 235 aaPredicted RBP11.44□□□□□ -0.58
VEGFA-206ENST00000372077 Q9BRP9 147 aa11.44□□□□□ -0.58
VEGFA-206ENST00000372077 NREPQ16612 68 aa11.43□□□□□ -0.58
VEGFA-206ENST00000372077 REG3GQ6UW15 175 aa11.43□□□□□ -0.58
VEGFA-206ENST00000372077 LRP1BQ9NZR2 4599 aa11.41□□□□□ -0.58
VEGFA-206ENST00000372077 DYNC1H1Q14204 4646 aaKnown RBP11.41□□□□□ -0.58
VEGFA-206ENST00000372077 ETDCA0A1B0GVM5 59 aa11.41□□□□□ -0.58
VEGFA-206ENST00000372077 PKHD1P08F94 4074 aa11.4□□□□□ -0.58
VEGFA-206ENST00000372077 FAM229BQ4G0N7 80 aa11.39□□□□□ -0.59
VEGFA-206ENST00000372077 PRLHP81277 87 aa11.38□□□□□ -0.59
VEGFA-206ENST00000372077 CXCL6P80162 114 aa11.37□□□□□ -0.59
VEGFA-206ENST00000372077 Q6ZRX8 168 aa11.36□□□□□ -0.59
VEGFA-206ENST00000372077 PDE6GP18545 87 aa11.35□□□□□ -0.59
VEGFA-206ENST00000372077 PSORS1C2Q9UIG4 136 aa11.34□□□□□ -0.59
VEGFA-206ENST00000372077 A0A1W2PNM2 257 aa11.33□□□□□ -0.6
VEGFA-206ENST00000372077 BCE1O60756 84 aa11.33□□□□□ -0.6
VEGFA-206ENST00000372077 HIGD2AQ9BW72 106 aa11.33□□□□□ -0.6
VEGFA-206ENST00000372077 IGKV4-1P06312 121 aa11.32□□□□□ -0.6
VEGFA-206ENST00000372077 C1orf137Q5JT78 98 aa11.32□□□□□ -0.6
VEGFA-206ENST00000372077 NDUFC1O43677 76 aa11.31□□□□□ -0.6
VEGFA-206ENST00000372077 ATP5EP56381 51 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-206ENST00000372077 H0Y9J4 135 aa11.31□□□□□ -0.6
VEGFA-206ENST00000372077 PRR15Q8IV56 129 aa11.3□□□□□ -0.6
VEGFA-206ENST00000372077 DHRS4-AS1Q9P1J3 65 aa11.3□□□□□ -0.6
VEGFA-206ENST00000372077 KRTAP13-1Q8IUC0 172 aa11.29□□□□□ -0.6
VEGFA-206ENST00000372077 TMEM254Q8TBM7 123 aa11.29□□□□□ -0.6
VEGFA-206ENST00000372077 CD164Q04900 197 aa11.28□□□□□ -0.6
VEGFA-206ENST00000372077 SMIM29Q86T20 159 aa11.28□□□□□ -0.6
VEGFA-206ENST00000372077 UBE2AP49459 152 aa11.26□□□□□ -0.61
VEGFA-206ENST00000372077 APOBP04114 4563 aaKnown RBP11.26□□□□□ -0.61
VEGFA-206ENST00000372077 PRR4Q16378 134 aa11.23□□□□□ -0.61
VEGFA-206ENST00000372077 K7EQZ3 153 aa11.22□□□□□ -0.61
VEGFA-206ENST00000372077 IGLV7-43P04211 117 aa11.22□□□□□ -0.61
VEGFA-206ENST00000372077 RPL37AP61513 92 aaKnown RBP11.22□□□□□ -0.61
VEGFA-206ENST00000372077 H3BQ85 93 aa11.21□□□□□ -0.61
VEGFA-206ENST00000372077 ZNF861PO60384 105 aa11.2□□□□□ -0.62
VEGFA-206ENST00000372077 IGLV5-48A0A075B6I7 105 aa11.19□□□□□ -0.62
VEGFA-206ENST00000372077 OCR1Q9BZK8 76 aa11.19□□□□□ -0.62
VEGFA-206ENST00000372077 WFDC13Q8IUB5 93 aa11.18□□□□□ -0.62
VEGFA-206ENST00000372077 CDK2AP2O75956 126 aa11.17□□□□□ -0.62
VEGFA-206ENST00000372077 SMR3BP02814 79 aaPredicted RBP11.16□□□□□ -0.62
VEGFA-206ENST00000372077 A0A087WSZ3 146 aa11.16□□□□□ -0.62
VEGFA-206ENST00000372077 Q8NBF4 154 aa11.15□□□□□ -0.62
VEGFA-206ENST00000372077 DSCR10P59022 87 aa11.14□□□□□ -0.63
VEGFA-206ENST00000372077 IGFL1Q6UW32 110 aa11.13□□□□□ -0.63
VEGFA-206ENST00000372077 VPS13BQ7Z7G8 4022 aa11.1□□□□□ -0.63
VEGFA-206ENST00000372077 SPRR1BP22528 89 aa11.1□□□□□ -0.63
VEGFA-206ENST00000372077 EPPK1P58107 5090 aaKnown RBP11.09□□□□□ -0.63
VEGFA-206ENST00000372077 KRTAP10-4P60372 401 aaPredicted RBP11.08□□□□□ -0.63
VEGFA-206ENST00000372077 SPRR4Q96PI1 79 aa11.08□□□□□ -0.63
VEGFA-206ENST00000372077 PSPHP1O15172 72 aa11.08□□□□□ -0.64
VEGFA-206ENST00000372077 ZNF706Q9Y5V0 76 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-206ENST00000372077 LINC00483Q53H64 154 aa11.04□□□□□ -0.64
VEGFA-206ENST00000372077 FAT1Q14517 4588 aa11.04□□□□□ -0.64
VEGFA-206ENST00000372077 HSPG2P98160 4391 aa11.04□□□□□ -0.64
VEGFA-206ENST00000372077 C4orf48Q5BLP8 95 aa11.04□□□□□ -0.64
VEGFA-206ENST00000372077 RBM12B-AS1Q9P1G2 102 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms