RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ABCA13Q86UQ4 5058 aa7.45□□□□□ -1.22
USF1-201ENST00000368019 SPRR1AP35321 89 aa7.45□□□□□ -1.22
USF1-201ENST00000368019 FUSP35637 526 aaKnown RBP eCLIP7.45□□□□□ -1.22
USF1-201ENST00000368019 TNP2Q05952 138 aa7.45□□□□□ -1.22
USF1-201ENST00000368019 SYCNQ0VAF6 134 aa7.45□□□□□ -1.22
USF1-201ENST00000368019 FP248Q71RG6 208 aaPredicted RBP7.45□□□□□ -1.22
USF1-201ENST00000368019 SCXQ7RTU7 201 aa7.45□□□□□ -1.22
USF1-201ENST00000368019 WFDC10BQ8IUB3 73 aa7.45□□□□□ -1.22
USF1-201ENST00000368019 UBE2DNLQ8IWF7 75 aa7.44□□□□□ -1.22
USF1-201ENST00000368019 NKAPP1Q8N9T2 125 aa7.44□□□□□ -1.22
USF1-201ENST00000368019 Q8N377 158 aa7.43□□□□□ -1.22
USF1-201ENST00000368019 KRTAP4-16G5E9R7 235 aaPredicted RBP7.42□□□□□ -1.22
USF1-201ENST00000368019 C1orf134Q5TEV5 83 aa7.42□□□□□ -1.22
USF1-201ENST00000368019 Q6ZRP5 223 aa7.42□□□□□ -1.22
USF1-201ENST00000368019 Q6ZRX8 168 aa7.42□□□□□ -1.22
USF1-201ENST00000368019 SPRR4Q96PI1 79 aa7.42□□□□□ -1.22
USF1-201ENST00000368019 Q8NBF4 154 aa7.41□□□□□ -1.22
USF1-201ENST00000368019 C7orf33Q8WU49 177 aa7.41□□□□□ -1.22
USF1-201ENST00000368019 LRP1BQ9NZR2 4599 aa7.4□□□□□ -1.22
USF1-201ENST00000368019 DNAH10OSP0CZ25 163 aa7.4□□□□□ -1.22
USF1-201ENST00000368019 CDK2AP2O75956 126 aa7.38□□□□□ -1.23
USF1-201ENST00000368019 ESRGQ1W209 222 aa7.38□□□□□ -1.23
USF1-201ENST00000368019 IGLV1-50A0A075B6I6 118 aa7.37□□□□□ -1.23
USF1-201ENST00000368019 NBDYA0A0U1RRE5 68 aa7.37□□□□□ -1.23
USF1-201ENST00000368019 A0A1W2PNM2 257 aa7.37□□□□□ -1.23
USF1-201ENST00000368019 APOBP04114 4563 aaKnown RBP7.36□□□□□ -1.23
USF1-201ENST00000368019 IGKV2D-24A0A075B6R9 120 aa7.36□□□□□ -1.23
USF1-201ENST00000368019 C1orf137Q5JT78 98 aa7.36□□□□□ -1.23
USF1-201ENST00000368019 SERTAD4-AS1Q5TG53 156 aa7.36□□□□□ -1.23
USF1-201ENST00000368019 ZCCHC13Q8WW36 166 aaKnown RBP7.36□□□□□ -1.23
USF1-201ENST00000368019 ETDCA0A1B0GVM5 59 aa7.35□□□□□ -1.23
USF1-201ENST00000368019 C16orf90A8MZG2 172 aa7.35□□□□□ -1.23
USF1-201ENST00000368019 LINC00588Q9Y4M8 146 aa7.35□□□□□ -1.23
USF1-201ENST00000368019 Q8N9L7 120 aa7.34□□□□□ -1.23
USF1-201ENST00000368019 Q9BRP9 147 aa7.34□□□□□ -1.23
USF1-201ENST00000368019 SMIM29Q86T20 159 aa7.33□□□□□ -1.24
USF1-201ENST00000368019 CYP4F30PQ9H0H9 118 aa7.33□□□□□ -1.24
USF1-201ENST00000368019 IGLV8-61A0A075B6I0 122 aa7.32□□□□□ -1.24
USF1-201ENST00000368019 hDV103S1A0JD37 113 aa7.32□□□□□ -1.24
USF1-201ENST00000368019 DSCR10P59022 87 aa7.32□□□□□ -1.24
USF1-201ENST00000368019 RPL37AP8A6NKH3 93 aa7.31□□□□□ -1.24
USF1-201ENST00000368019 Q8N1X5 172 aa7.31□□□□□ -1.24
USF1-201ENST00000368019 DEFB105AQ8NG35 78 aa7.31□□□□□ -1.24
USF1-201ENST00000368019 HIGD2AQ9BW72 106 aa7.31□□□□□ -1.24
USF1-201ENST00000368019 KRTAP1-5Q9BYS1 174 aa7.31□□□□□ -1.24
USF1-201ENST00000368019 DNAH5Q8TE73 4624 aa7.31□□□□□ -1.24
USF1-201ENST00000368019 NDUFB1O75438 58 aa7.3□□□□□ -1.24
USF1-201ENST00000368019 LINC00474Q9P2X8 69 aa7.3□□□□□ -1.24
USF1-201ENST00000368019 MRPL55Q7Z7F7 128 aaKnown RBP7.29□□□□□ -1.24
USF1-201ENST00000368019 HCG22E2RYF7 251 aa7.28□□□□□ -1.24
USF1-201ENST00000368019 H3BPC8 53 aa7.28□□□□□ -1.24
USF1-201ENST00000368019 KRTAP10-2P60368 255 aa7.28□□□□□ -1.24
USF1-201ENST00000368019 Q1T7F1 81 aa7.28□□□□□ -1.24
USF1-201ENST00000368019 REG3GQ6UW15 175 aa7.27□□□□□ -1.25
USF1-201ENST00000368019 FAM30AQ9NZY2 134 aa7.27□□□□□ -1.25
USF1-201ENST00000368019 FAM229BQ4G0N7 80 aa7.26□□□□□ -1.25
USF1-201ENST00000368019 Q6ZRN7 208 aaPredicted RBP7.25□□□□□ -1.25
USF1-201ENST00000368019 KRTAP7-1Q8IUC3 87 aa7.25□□□□□ -1.25
USF1-201ENST00000368019 HERC1Q15751 4861 aa7.24□□□□□ -1.25
USF1-201ENST00000368019 K7EQZ3 153 aa7.24□□□□□ -1.25
USF1-201ENST00000368019 UBE2BP63146 152 aa7.24□□□□□ -1.25
USF1-201ENST00000368019 ST20-AS1Q8NBB2 130 aa7.24□□□□□ -1.25
USF1-201ENST00000368019 V9GYY9 64 aa7.24□□□□□ -1.25
USF1-201ENST00000368019 SPANXA2-OT1Q8N9U9 137 aa7.23□□□□□ -1.25
USF1-201ENST00000368019 DMBT1Q9UGM3 2413 aaPredicted RBP7.22□□□□□ -1.25
USF1-201ENST00000368019 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.22□□□□□ -1.25
USF1-201ENST00000368019 PSCAO43653 123 aa7.22□□□□□ -1.25
USF1-201ENST00000368019 SPRR1BP22528 89 aa7.22□□□□□ -1.25
USF1-201ENST00000368019 FAT1Q14517 4588 aa7.22□□□□□ -1.25
USF1-201ENST00000368019 FAM168BA1KXE4 195 aa7.21□□□□□ -1.26
USF1-201ENST00000368019 MP68P56378 58 aa7.21□□□□□ -1.26
USF1-201ENST00000368019 IGFL1Q6UW32 110 aa7.21□□□□□ -1.26
USF1-201ENST00000368019 BRK1Q8WUW1 75 aa7.21□□□□□ -1.26
USF1-201ENST00000368019 H0Y9J4 135 aa7.2□□□□□ -1.26
USF1-201ENST00000368019 C1orf64Q8NEQ6 169 aa7.2□□□□□ -1.26
USF1-201ENST00000368019 PKIGQ9Y2B9 76 aa7.2□□□□□ -1.26
USF1-201ENST00000368019 SRRM2Q9UQ35 2752 aaKnown RBP7.2□□□□□ -1.26
USF1-201ENST00000368019 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
USF1-201ENST00000368019 PRR15Q8IV56 129 aa7.19□□□□□ -1.26
USF1-201ENST00000368019 MPLKIPQ8TAP9 179 aa7.19□□□□□ -1.26
USF1-201ENST00000368019 TRAV22A0A0B4J277 110 aa7.18□□□□□ -1.26
USF1-201ENST00000368019 CNBPP62633 177 aaKnown RBP7.18□□□□□ -1.26
USF1-201ENST00000368019 FLG2Q5D862 2391 aaPredicted RBP7.17□□□□□ -1.26
USF1-201ENST00000368019 VPS13BQ7Z7G8 4022 aa7.17□□□□□ -1.26
USF1-201ENST00000368019 C1orf195Q5TG92 126 aa7.16□□□□□ -1.26
USF1-201ENST00000368019 MYCBP2O75592 4640 aa7.14□□□□□ -1.27
USF1-201ENST00000368019 A0A087WTM6 91 aa7.14□□□□□ -1.27
USF1-201ENST00000368019 KRTAP10-1P60331 282 aa7.14□□□□□ -1.27
USF1-201ENST00000368019 C14orf177Q52M58 125 aa7.14□□□□□ -1.27
USF1-201ENST00000368019 A0A087WSZ3 146 aa7.13□□□□□ -1.27
USF1-201ENST00000368019 A8MWP4 228 aa7.13□□□□□ -1.27
USF1-201ENST00000368019 Q5VSD8 79 aa7.12□□□□□ -1.27
USF1-201ENST00000368019 UBE2AP49459 152 aa7.11□□□□□ -1.27
USF1-201ENST00000368019 CASC2Q6XLA1 102 aa7.11□□□□□ -1.27
USF1-201ENST00000368019 A0A096LNI7 61 aa7.1□□□□□ -1.27
USF1-201ENST00000368019 H0Y9P7 68 aa7.1□□□□□ -1.27
USF1-201ENST00000368019 WFDC13Q8IUB5 93 aa7.1□□□□□ -1.27
USF1-201ENST00000368019 LINC00472Q9H8W2 130 aa7.1□□□□□ -1.27
USF1-201ENST00000368019 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
USF1-201ENST00000368019 RPL37AP61513 92 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms