RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 KRTAP7-1Q8IUC3 87 aa8.34□□□□□ -1.07
SQSTM1-201ENST00000360718 Q8N377 158 aa8.34□□□□□ -1.07
SQSTM1-201ENST00000360718 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
SQSTM1-201ENST00000360718 IGLV5-52A0A0A0MRZ9 124 aa8.33□□□□□ -1.08
SQSTM1-201ENST00000360718 DNAH11Q96DT5 4516 aa8.33□□□□□ -1.08
SQSTM1-201ENST00000360718 NDUFC1O43677 76 aa8.33□□□□□ -1.08
SQSTM1-201ENST00000360718 Q6ZRX8 168 aa8.33□□□□□ -1.08
SQSTM1-201ENST00000360718 ETDCA0A1B0GVM5 59 aa8.32□□□□□ -1.08
SQSTM1-201ENST00000360718 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
SQSTM1-201ENST00000360718 MRPL55Q7Z7F7 128 aaKnown RBP8.32□□□□□ -1.08
SQSTM1-201ENST00000360718 IGLV1-50A0A075B6I6 118 aa8.32□□□□□ -1.08
SQSTM1-201ENST00000360718 BPY2O14599 106 aa8.31□□□□□ -1.08
SQSTM1-201ENST00000360718 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
SQSTM1-201ENST00000360718 SPRR1AP35321 89 aa8.3□□□□□ -1.08
SQSTM1-201ENST00000360718 RPL37AP8A6NKH3 93 aa8.29□□□□□ -1.08
SQSTM1-201ENST00000360718 PANO1I0J062 215 aa8.29□□□□□ -1.08
SQSTM1-201ENST00000360718 ERC2-IT1O76042 136 aa8.29□□□□□ -1.08
SQSTM1-201ENST00000360718 RYR2Q92736 4967 aa8.29□□□□□ -1.08
SQSTM1-201ENST00000360718 A0A1W2PNN7 141 aa8.29□□□□□ -1.08
SQSTM1-201ENST00000360718 KRTAP4-16G5E9R7 235 aaPredicted RBP8.29□□□□□ -1.08
SQSTM1-201ENST00000360718 ATP5EP56381 51 aaPredicted RBP8.29□□□□□ -1.08
SQSTM1-201ENST00000360718 PKD1P98161 4303 aa8.29□□□□□ -1.08
SQSTM1-201ENST00000360718 IGKV4-1P06312 121 aa8.28□□□□□ -1.08
SQSTM1-201ENST00000360718 KRTAP10-2P60368 255 aa8.28□□□□□ -1.08
SQSTM1-201ENST00000360718 HRCT1Q6UXD1 115 aa8.28□□□□□ -1.08
SQSTM1-201ENST00000360718 SNURFQ9Y675 71 aa8.28□□□□□ -1.08
SQSTM1-201ENST00000360718 Q9BRP9 147 aa8.27□□□□□ -1.09
SQSTM1-201ENST00000360718 DNAH5Q8TE73 4624 aa8.26□□□□□ -1.09
SQSTM1-201ENST00000360718 SPACA4Q8TDM5 124 aa8.26□□□□□ -1.09
SQSTM1-201ENST00000360718 C1orf137Q5JT78 98 aa8.26□□□□□ -1.09
SQSTM1-201ENST00000360718 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
SQSTM1-201ENST00000360718 SMIM26A0A096LP01 95 aa8.25□□□□□ -1.09
SQSTM1-201ENST00000360718 F8WEM9 126 aa8.25□□□□□ -1.09
SQSTM1-201ENST00000360718 Q8N9L7 120 aa8.25□□□□□ -1.09
SQSTM1-201ENST00000360718 UBE2BP63146 152 aa8.24□□□□□ -1.09
SQSTM1-201ENST00000360718 TMEM254Q8TBM7 123 aa8.24□□□□□ -1.09
SQSTM1-201ENST00000360718 LINC00336Q6ZUF6 198 aa8.23□□□□□ -1.09
SQSTM1-201ENST00000360718 Q8NBF4 154 aa8.23□□□□□ -1.09
SQSTM1-201ENST00000360718 A0A1W2PNM2 257 aa8.23□□□□□ -1.09
SQSTM1-201ENST00000360718 REG3GQ6UW15 175 aa8.23□□□□□ -1.09
SQSTM1-201ENST00000360718 PHF5AQ7RTV0 110 aaKnown RBP8.22□□□□□ -1.09
SQSTM1-201ENST00000360718 ST20-AS1Q8NBB2 130 aa8.22□□□□□ -1.09
SQSTM1-201ENST00000360718 OCR1Q9BZK8 76 aa8.22□□□□□ -1.09
SQSTM1-201ENST00000360718 SPRR4Q96PI1 79 aa8.21□□□□□ -1.1
SQSTM1-201ENST00000360718 PKHD1P08F94 4074 aa8.2□□□□□ -1.1
SQSTM1-201ENST00000360718 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
SQSTM1-201ENST00000360718 PRO0628Q9UI54 55 aa8.19□□□□□ -1.1
SQSTM1-201ENST00000360718 DNAH8Q96JB1 4490 aa8.19□□□□□ -1.1
SQSTM1-201ENST00000360718 PLAC8Q9NZF1 115 aa8.18□□□□□ -1.1
SQSTM1-201ENST00000360718 RYR3Q15413 4870 aa8.17□□□□□ -1.1
SQSTM1-201ENST00000360718 A0A0U1RQV1 116 aa8.17□□□□□ -1.1
SQSTM1-201ENST00000360718 FAM30AQ9NZY2 134 aa8.17□□□□□ -1.1
SQSTM1-201ENST00000360718 KRTAP10-1P60331 282 aa8.15□□□□□ -1.1
SQSTM1-201ENST00000360718 FP248Q71RG6 208 aaPredicted RBP8.15□□□□□ -1.1
SQSTM1-201ENST00000360718 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
SQSTM1-201ENST00000360718 A0A1B0GVY2 172 aa8.13□□□□□ -1.11
SQSTM1-201ENST00000360718 DSCR10P59022 87 aa8.12□□□□□ -1.11
SQSTM1-201ENST00000360718 UBE2AP49459 152 aa8.11□□□□□ -1.11
SQSTM1-201ENST00000360718 SEC61GP60059 68 aa8.11□□□□□ -1.11
SQSTM1-201ENST00000360718 PRLHP81277 87 aa8.11□□□□□ -1.11
SQSTM1-201ENST00000360718 H0Y9J4 135 aa8.1□□□□□ -1.11
SQSTM1-201ENST00000360718 Q6ZSA8 131 aa8.1□□□□□ -1.11
SQSTM1-201ENST00000360718 HIGD2AQ9BW72 106 aa8.1□□□□□ -1.11
SQSTM1-201ENST00000360718 CIRBP-AS1Q8TBR5 109 aa8.1□□□□□ -1.11
SQSTM1-201ENST00000360718 IGLV8-61A0A075B6I0 122 aa8.09□□□□□ -1.11
SQSTM1-201ENST00000360718 LRP1BQ9NZR2 4599 aa8.09□□□□□ -1.11
SQSTM1-201ENST00000360718 K7EQZ3 153 aa8.09□□□□□ -1.11
SQSTM1-201ENST00000360718 IGFL1Q6UW32 110 aa8.09□□□□□ -1.11
SQSTM1-201ENST00000360718 PSORS1C2Q9UIG4 136 aa8.08□□□□□ -1.12
SQSTM1-201ENST00000360718 SRRM2Q9UQ35 2752 aaKnown RBP8.08□□□□□ -1.12
SQSTM1-201ENST00000360718 DYNC1H1Q14204 4646 aaKnown RBP8.07□□□□□ -1.12
SQSTM1-201ENST00000360718 HCG22E2RYF7 251 aa8.07□□□□□ -1.12
SQSTM1-201ENST00000360718 V9GYY9 64 aa8.04□□□□□ -1.12
SQSTM1-201ENST00000360718 A0A087WSZ3 146 aa8.03□□□□□ -1.12
SQSTM1-201ENST00000360718 KRTAP13-1Q8IUC0 172 aa8.03□□□□□ -1.12
SQSTM1-201ENST00000360718 SPRR1BP22528 89 aa8.02□□□□□ -1.13
SQSTM1-201ENST00000360718 A0A0G2JQZ4 141 aa8.01□□□□□ -1.13
SQSTM1-201ENST00000360718 ZCCHC13Q8WW36 166 aaKnown RBP8□□□□□ -1.13
SQSTM1-201ENST00000360718 ZNF861PO60384 105 aa7.99□□□□□ -1.13
SQSTM1-201ENST00000360718 IGLV7-43P04211 117 aa7.99□□□□□ -1.13
SQSTM1-201ENST00000360718 DEFB116Q30KQ4 102 aa7.99□□□□□ -1.13
SQSTM1-201ENST00000360718 APOBP04114 4563 aaKnown RBP7.98□□□□□ -1.13
SQSTM1-201ENST00000360718 NDUFB1O75438 58 aa7.98□□□□□ -1.13
SQSTM1-201ENST00000360718 FAM229BQ4G0N7 80 aa7.98□□□□□ -1.13
SQSTM1-201ENST00000360718 MP68P56378 58 aa7.98□□□□□ -1.13
SQSTM1-201ENST00000360718 ZNF706Q9Y5V0 76 aaPredicted RBP7.98□□□□□ -1.13
SQSTM1-201ENST00000360718 C1orf195Q5TG92 126 aa7.97□□□□□ -1.13
SQSTM1-201ENST00000360718 BRK1Q8WUW1 75 aa7.97□□□□□ -1.13
SQSTM1-201ENST00000360718 WFDC13Q8IUB5 93 aa7.96□□□□□ -1.13
SQSTM1-201ENST00000360718 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
SQSTM1-201ENST00000360718 hDV103S1A0JD37 113 aa7.95□□□□□ -1.14
SQSTM1-201ENST00000360718 VPS13BQ7Z7G8 4022 aa7.94□□□□□ -1.14
SQSTM1-201ENST00000360718 PRR15Q8IV56 129 aa7.94□□□□□ -1.14
SQSTM1-201ENST00000360718 CASC2Q6XLA1 102 aa7.93□□□□□ -1.14
SQSTM1-201ENST00000360718 A8MWP4 228 aa7.92□□□□□ -1.14
SQSTM1-201ENST00000360718 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
SQSTM1-201ENST00000360718 RPL37AP61513 92 aaKnown RBP7.92□□□□□ -1.14
SQSTM1-201ENST00000360718 H3BPC8 53 aa7.92□□□□□ -1.14
SQSTM1-201ENST00000360718 CYP4F30PQ9H0H9 118 aa7.92□□□□□ -1.14
SQSTM1-201ENST00000360718 Q1T7F1 81 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms