RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 TMEM254Q8TBM7 123 aa8.86□□□□□ -0.99
CSNK1E-201ENST00000359867 RYR2Q92736 4967 aa8.86□□□□□ -0.99
CSNK1E-201ENST00000359867 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.85□□□□□ -0.99
CSNK1E-201ENST00000359867 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.85□□□□□ -0.99
CSNK1E-201ENST00000359867 TNP2Q05952 138 aa8.84□□□□□ -0.99
CSNK1E-201ENST00000359867 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
CSNK1E-201ENST00000359867 FUSP35637 526 aaKnown RBP eCLIP8.84□□□□□ -0.99
CSNK1E-201ENST00000359867 CD164Q04900 197 aa8.84□□□□□ -0.99
CSNK1E-201ENST00000359867 NREPQ16612 68 aa8.84□□□□□ -0.99
CSNK1E-201ENST00000359867 A0A087WTM6 91 aa8.84□□□□□ -1
CSNK1E-201ENST00000359867 PRYO14603 147 aa8.83□□□□□ -1
CSNK1E-201ENST00000359867 Q8N9L7 120 aa8.83□□□□□ -1
CSNK1E-201ENST00000359867 FAT2Q9NYQ8 4349 aa8.82□□□□□ -1
CSNK1E-201ENST00000359867 IGLV1-50A0A075B6I6 118 aa8.82□□□□□ -1
CSNK1E-201ENST00000359867 FAM168BA1KXE4 195 aa8.82□□□□□ -1
CSNK1E-201ENST00000359867 C16orf90A8MZG2 172 aa8.82□□□□□ -1
CSNK1E-201ENST00000359867 A8MU10 97 aa8.82□□□□□ -1
CSNK1E-201ENST00000359867 KRTAP7-1Q8IUC3 87 aa8.82□□□□□ -1
CSNK1E-201ENST00000359867 MRPL55Q7Z7F7 128 aaKnown RBP8.81□□□□□ -1
CSNK1E-201ENST00000359867 PDE6GP18545 87 aa8.8□□□□□ -1
CSNK1E-201ENST00000359867 CXCL6P80162 114 aa8.8□□□□□ -1
CSNK1E-201ENST00000359867 SPRR1AP35321 89 aa8.79□□□□□ -1
CSNK1E-201ENST00000359867 PSPHP1O15172 72 aa8.79□□□□□ -1
CSNK1E-201ENST00000359867 RYR3Q15413 4870 aa8.78□□□□□ -1
CSNK1E-201ENST00000359867 A0A096LNI7 61 aa8.78□□□□□ -1
CSNK1E-201ENST00000359867 DEFB105AQ8NG35 78 aa8.78□□□□□ -1
CSNK1E-201ENST00000359867 RPL37AP8A6NKH3 93 aa8.77□□□□□ -1.01
CSNK1E-201ENST00000359867 KRTAP4-16G5E9R7 235 aaPredicted RBP8.77□□□□□ -1.01
CSNK1E-201ENST00000359867 BPY2O14599 106 aa8.77□□□□□ -1.01
CSNK1E-201ENST00000359867 HECTD4Q9Y4D8 3996 aa8.77□□□□□ -1.01
CSNK1E-201ENST00000359867 C9orf163Q8N9P6 203 aa8.77□□□□□ -1.01
CSNK1E-201ENST00000359867 HIGD2AQ9BW72 106 aa8.76□□□□□ -1.01
CSNK1E-201ENST00000359867 DHRS4-AS1Q9P1J3 65 aa8.76□□□□□ -1.01
CSNK1E-201ENST00000359867 DNAH11Q96DT5 4516 aa8.76□□□□□ -1.01
CSNK1E-201ENST00000359867 Q6ZRX8 168 aa8.75□□□□□ -1.01
CSNK1E-201ENST00000359867 ETDCA0A1B0GVM5 59 aa8.75□□□□□ -1.01
CSNK1E-201ENST00000359867 PKD1P98161 4303 aa8.74□□□□□ -1.01
CSNK1E-201ENST00000359867 hDV103S1A0JD37 113 aa8.74□□□□□ -1.01
CSNK1E-201ENST00000359867 IGKV2-24A0A0C4DH68 120 aa8.73□□□□□ -1.01
CSNK1E-201ENST00000359867 KRTAP10-2P60368 255 aa8.73□□□□□ -1.01
CSNK1E-201ENST00000359867 A0A1W2PNN7 141 aa8.72□□□□□ -1.01
CSNK1E-201ENST00000359867 Q1T7F1 81 aa8.72□□□□□ -1.01
CSNK1E-201ENST00000359867 REG3GQ6UW15 175 aa8.72□□□□□ -1.01
CSNK1E-201ENST00000359867 RBM12B-AS1Q9P1G2 102 aa8.71□□□□□ -1.01
CSNK1E-201ENST00000359867 IGLV5-52A0A0A0MRZ9 124 aa8.7□□□□□ -1.02
CSNK1E-201ENST00000359867 ERC2-IT1O76042 136 aa8.7□□□□□ -1.02
CSNK1E-201ENST00000359867 OCR1Q9BZK8 76 aa8.7□□□□□ -1.02
CSNK1E-201ENST00000359867 IGKV4-1P06312 121 aa8.7□□□□□ -1.02
CSNK1E-201ENST00000359867 Q9BRP9 147 aa8.7□□□□□ -1.02
CSNK1E-201ENST00000359867 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
CSNK1E-201ENST00000359867 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
CSNK1E-201ENST00000359867 DNAH5Q8TE73 4624 aa8.69□□□□□ -1.02
CSNK1E-201ENST00000359867 PKHD1P08F94 4074 aa8.68□□□□□ -1.02
CSNK1E-201ENST00000359867 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
CSNK1E-201ENST00000359867 Q8N377 158 aa8.67□□□□□ -1.02
CSNK1E-201ENST00000359867 IGLV5-48A0A075B6I7 105 aa8.66□□□□□ -1.02
CSNK1E-201ENST00000359867 A8MUN3 132 aa8.65□□□□□ -1.02
CSNK1E-201ENST00000359867 PANO1I0J062 215 aa8.65□□□□□ -1.02
CSNK1E-201ENST00000359867 UBE2BP63146 152 aa8.65□□□□□ -1.02
CSNK1E-201ENST00000359867 ST20-AS1Q8NBB2 130 aa8.65□□□□□ -1.03
CSNK1E-201ENST00000359867 A0A1B0GVY2 172 aa8.64□□□□□ -1.03
CSNK1E-201ENST00000359867 C4orf48Q5BLP8 95 aa8.64□□□□□ -1.03
CSNK1E-201ENST00000359867 PHF5AQ7RTV0 110 aaKnown RBP8.63□□□□□ -1.03
CSNK1E-201ENST00000359867 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.63□□□□□ -1.03
CSNK1E-201ENST00000359867 PRR4Q16378 134 aa8.62□□□□□ -1.03
CSNK1E-201ENST00000359867 KTN1-AS1Q86SY8 53 aa8.62□□□□□ -1.03
CSNK1E-201ENST00000359867 H0Y9J4 135 aa8.61□□□□□ -1.03
CSNK1E-201ENST00000359867 SPACA4Q8TDM5 124 aa8.61□□□□□ -1.03
CSNK1E-201ENST00000359867 FAM30AQ9NZY2 134 aa8.61□□□□□ -1.03
CSNK1E-201ENST00000359867 A0A1W2PNM2 257 aa8.61□□□□□ -1.03
CSNK1E-201ENST00000359867 KRTAP10-1P60331 282 aa8.6□□□□□ -1.03
CSNK1E-201ENST00000359867 SMIM29Q86T20 159 aa8.6□□□□□ -1.03
CSNK1E-201ENST00000359867 A0A0G2JQZ4 141 aa8.59□□□□□ -1.03
CSNK1E-201ENST00000359867 C1orf137Q5JT78 98 aa8.58□□□□□ -1.04
CSNK1E-201ENST00000359867 Q5VV11 94 aa8.58□□□□□ -1.04
CSNK1E-201ENST00000359867 KRTAP11-1Q8IUC1 163 aa8.58□□□□□ -1.04
CSNK1E-201ENST00000359867 PRLHP81277 87 aa8.57□□□□□ -1.04
CSNK1E-201ENST00000359867 LRP1BQ9NZR2 4599 aa8.56□□□□□ -1.04
CSNK1E-201ENST00000359867 A0A1B0GW54 56 aa8.56□□□□□ -1.04
CSNK1E-201ENST00000359867 SPTSSBQ8NFR3 76 aa8.56□□□□□ -1.04
CSNK1E-201ENST00000359867 DNAH8Q96JB1 4490 aa8.55□□□□□ -1.04
CSNK1E-201ENST00000359867 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
CSNK1E-201ENST00000359867 UBE2AP49459 152 aa8.53□□□□□ -1.04
CSNK1E-201ENST00000359867 Q8NBF4 154 aa8.52□□□□□ -1.05
CSNK1E-201ENST00000359867 K7EQZ3 153 aa8.51□□□□□ -1.05
CSNK1E-201ENST00000359867 DEFB116Q30KQ4 102 aa8.51□□□□□ -1.05
CSNK1E-201ENST00000359867 PLAC8Q9NZF1 115 aa8.51□□□□□ -1.05
CSNK1E-201ENST00000359867 Q6ZSA8 131 aa8.51□□□□□ -1.05
CSNK1E-201ENST00000359867 CHKB-CPT1BH3BT56 60 aa8.5□□□□□ -1.05
CSNK1E-201ENST00000359867 SPRR1BP22528 89 aa8.5□□□□□ -1.05
CSNK1E-201ENST00000359867 DSCR10P59022 87 aa8.5□□□□□ -1.05
CSNK1E-201ENST00000359867 KRTAP13-1Q8IUC0 172 aa8.5□□□□□ -1.05
CSNK1E-201ENST00000359867 ZCCHC13Q8WW36 166 aaKnown RBP8.5□□□□□ -1.05
CSNK1E-201ENST00000359867 CIRBP-AS1Q8TBR5 109 aa8.5□□□□□ -1.05
CSNK1E-201ENST00000359867 IGLV8-61A0A075B6I0 122 aa8.49□□□□□ -1.05
CSNK1E-201ENST00000359867 EPPK1P58107 5090 aaKnown RBP8.49□□□□□ -1.05
CSNK1E-201ENST00000359867 LCA10Q71F78 164 aa8.48□□□□□ -1.05
CSNK1E-201ENST00000359867 HCG22E2RYF7 251 aa8.48□□□□□ -1.05
CSNK1E-201ENST00000359867 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
CSNK1E-201ENST00000359867 A6NN06 94 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms