RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 GNG13Q9P2W3 67 aa2.83□□□□□ -1.96
CCL20-201ENST00000358813 TRBV30A0A0K0K1B3 111 aa2.82□□□□□ -1.96
CCL20-201ENST00000358813 KANTRA0A1W2PQU2 76 aa2.82□□□□□ -1.96
CCL20-201ENST00000358813 HMSDA8MTL9 139 aa2.82□□□□□ -1.96
CCL20-201ENST00000358813 M0R2T5 61 aa2.82□□□□□ -1.96
CCL20-201ENST00000358813 ARPC5O15511 151 aa2.82□□□□□ -1.96
CCL20-201ENST00000358813 Q5BKY6 102 aa2.82□□□□□ -1.96
CCL20-201ENST00000358813 TCTE3Q8IZS6 198 aa2.82□□□□□ -1.96
CCL20-201ENST00000358813 C2orf88Q9BSF0 95 aa2.82□□□□□ -1.96
CCL20-201ENST00000358813 NHP2Q9NX24 153 aaKnown RBP2.82□□□□□ -1.96
CCL20-201ENST00000358813 TOMM7Q9P0U1 55 aa2.82□□□□□ -1.96
CCL20-201ENST00000358813 BCE1O60756 84 aa2.81□□□□□ -1.96
CCL20-201ENST00000358813 LGALS3P17931 250 aaKnown RBP2.81□□□□□ -1.96
CCL20-201ENST00000358813 IFI27P40305 119 aaPredicted RBP2.81□□□□□ -1.96
CCL20-201ENST00000358813 SPAG11AQ6PDA7 123 aa2.81□□□□□ -1.96
CCL20-201ENST00000358813 UNQ6190/PRO20217Q6UXQ8 127 aa2.81□□□□□ -1.96
CCL20-201ENST00000358813 FP248Q71RG6 208 aaPredicted RBP2.81□□□□□ -1.96
CCL20-201ENST00000358813 FAM19A2Q8N3H0 131 aa2.81□□□□□ -1.96
CCL20-201ENST00000358813 C9orf62Q8N4C0 152 aa2.81□□□□□ -1.96
CCL20-201ENST00000358813 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
CCL20-201ENST00000358813 ZNF727A8MUV8 499 aa2.8□□□□□ -1.96
CCL20-201ENST00000358813 P0C880 135 aa2.8□□□□□ -1.96
CCL20-201ENST00000358813 Q6ZUT4 128 aa2.8□□□□□ -1.96
CCL20-201ENST00000358813 TMEM126AQ9H061 195 aa2.8□□□□□ -1.96
CCL20-201ENST00000358813 C6orf48Q9UBA6 75 aa2.8□□□□□ -1.96
CCL20-201ENST00000358813 C22orf24Q9Y442 160 aa2.8□□□□□ -1.96
CCL20-201ENST00000358813 TRBV6-5A0A0K0K1A5 114 aa2.79□□□□□ -1.96
CCL20-201ENST00000358813 TRBV27A0A0K0K1C4 114 aa2.79□□□□□ -1.96
CCL20-201ENST00000358813 FOXA3P55318 350 aaPredicted RBP2.79□□□□□ -1.96
CCL20-201ENST00000358813 PRR15Q8IV56 129 aa2.79□□□□□ -1.96
CCL20-201ENST00000358813 A0A1B0GUT8 65 aa2.78□□□□□ -1.96
CCL20-201ENST00000358813 J3KT08 172 aa2.78□□□□□ -1.96
CCL20-201ENST00000358813 J3QQQ9 107 aa2.78□□□□□ -1.96
CCL20-201ENST00000358813 RPS28P62857 69 aaKnown RBP2.78□□□□□ -1.96
CCL20-201ENST00000358813 C2orf82Q6UX34 121 aa2.78□□□□□ -1.96
CCL20-201ENST00000358813 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
CCL20-201ENST00000358813 TIMM21Q9BVV7 248 aa2.78□□□□□ -1.96
CCL20-201ENST00000358813 CNFNQ9BYD5 112 aa2.78□□□□□ -1.96
CCL20-201ENST00000358813 CKS2P33552 79 aa2.77□□□□□ -1.97
CCL20-201ENST00000358813 SEC11AP67812 179 aa2.77□□□□□ -1.97
CCL20-201ENST00000358813 ASB16-AS1Q495Z4 193 aa2.77□□□□□ -1.97
CCL20-201ENST00000358813 Q6ZQT0 140 aa2.77□□□□□ -1.97
CCL20-201ENST00000358813 TMEM191AQ9H0A3 160 aa2.77□□□□□ -1.97
CCL20-201ENST00000358813 HIGD1CA8MV81 97 aa2.76□□□□□ -1.97
CCL20-201ENST00000358813 F8VRH5 84 aa2.76□□□□□ -1.97
CCL20-201ENST00000358813 S100A8P05109 93 aa2.76□□□□□ -1.97
CCL20-201ENST00000358813 ZNF345Q14585 488 aa2.76□□□□□ -1.97
CCL20-201ENST00000358813 TMEM141Q96I45 108 aa2.76□□□□□ -1.97
CCL20-201ENST00000358813 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
CCL20-201ENST00000358813 A0A1B0GX51 115 aa2.75□□□□□ -1.97
CCL20-201ENST00000358813 F8W036 122 aa2.75□□□□□ -1.97
CCL20-201ENST00000358813 POLR2KP53803 58 aaKnown RBP2.75□□□□□ -1.97
CCL20-201ENST00000358813 RPL39P62891 51 aaKnown RBP2.75□□□□□ -1.97
CCL20-201ENST00000358813 PRLHP81277 87 aa2.75□□□□□ -1.97
CCL20-201ENST00000358813 MRPS36P82909 103 aaKnown RBP2.75□□□□□ -1.97
CCL20-201ENST00000358813 HRCT1Q6UXD1 115 aa2.75□□□□□ -1.97
CCL20-201ENST00000358813 SOSTDC1Q6X4U4 206 aa2.75□□□□□ -1.97
CCL20-201ENST00000358813 C20orf78Q9BR46 151 aa2.75□□□□□ -1.97
CCL20-201ENST00000358813 NAT8BQ9UHF3 227 aa2.75□□□□□ -1.97
CCL20-201ENST00000358813 SPINK1P00995 79 aa2.74□□□□□ -1.97
CCL20-201ENST00000358813 NDUFA6P56556 154 aa2.74□□□□□ -1.97
CCL20-201ENST00000358813 ALKAL2Q6UX46 152 aa2.74□□□□□ -1.97
CCL20-201ENST00000358813 Q8IZM0 81 aa2.74□□□□□ -1.97
CCL20-201ENST00000358813 HIST1H2BKO60814 126 aa2.73□□□□□ -1.97
CCL20-201ENST00000358813 HIST1H2BJP06899 126 aa2.73□□□□□ -1.97
CCL20-201ENST00000358813 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
CCL20-201ENST00000358813 SMIM2Q9BVW6 85 aa2.73□□□□□ -1.97
CCL20-201ENST00000358813 D6R8Y8 96 aa2.72□□□□□ -1.97
CCL20-201ENST00000358813 TIMM17BO60830 172 aa2.72□□□□□ -1.97
CCL20-201ENST00000358813 SMIM7Q9BQ49 75 aa2.72□□□□□ -1.97
CCL20-201ENST00000358813 A0A0G2JQZ4 141 aa2.71□□□□□ -1.98
CCL20-201ENST00000358813 H3BRM9 83 aa2.71□□□□□ -1.98
CCL20-201ENST00000358813 BAALC-AS2P0C853 105 aa2.71□□□□□ -1.98
CCL20-201ENST00000358813 FABP2P12104 132 aa2.71□□□□□ -1.98
CCL20-201ENST00000358813 CLLU1Q5K131 121 aa2.71□□□□□ -1.98
CCL20-201ENST00000358813 C9orf153Q5TBE3 101 aa2.71□□□□□ -1.98
CCL20-201ENST00000358813 ETDCA0A1B0GVM5 59 aa2.7□□□□□ -1.98
CCL20-201ENST00000358813 COX7B2Q8TF08 81 aa2.7□□□□□ -1.98
CCL20-201ENST00000358813 LIMD2Q9BT23 127 aa2.7□□□□□ -1.98
CCL20-201ENST00000358813 CST9LQ9H4G1 147 aa2.7□□□□□ -1.98
CCL20-201ENST00000358813 K7ERJ3 54 aa2.69□□□□□ -1.98
CCL20-201ENST00000358813 IGKV4-1P06312 121 aa2.69□□□□□ -1.98
CCL20-201ENST00000358813 PEA15Q15121 130 aa2.69□□□□□ -1.98
CCL20-201ENST00000358813 ADIRFQ15847 76 aa2.69□□□□□ -1.98
CCL20-201ENST00000358813 MRPL54Q6P161 138 aaKnown RBP2.69□□□□□ -1.98
CCL20-201ENST00000358813 C7orf65Q6ZTY9 151 aa2.69□□□□□ -1.98
CCL20-201ENST00000358813 PRELID3AQ96N28 172 aa2.69□□□□□ -1.98
CCL20-201ENST00000358813 C14orf132Q9NPU4 83 aa2.69□□□□□ -1.98
CCL20-201ENST00000358813 TRBV7-6A0A0J9YX20 115 aa2.68□□□□□ -1.98
CCL20-201ENST00000358813 RPS29P62273 56 aaKnown RBP2.68□□□□□ -1.98
CCL20-201ENST00000358813 PCOTHQ58A44 107 aa2.68□□□□□ -1.98
CCL20-201ENST00000358813 SPRR4Q96PI1 79 aa2.68□□□□□ -1.98
CCL20-201ENST00000358813 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
CCL20-201ENST00000358813 CDKN2A-AS1Q9UH64 79 aa2.68□□□□□ -1.98
CCL20-201ENST00000358813 C9orf92A6NGG3 77 aa2.67□□□□□ -1.98
CCL20-201ENST00000358813 DPM2O94777 84 aa2.67□□□□□ -1.98
CCL20-201ENST00000358813 MT1HP80294 61 aa2.67□□□□□ -1.98
CCL20-201ENST00000358813 SFTA2Q6UW10 78 aa2.67□□□□□ -1.98
CCL20-201ENST00000358813 KRTAP13-1Q8IUC0 172 aa2.67□□□□□ -1.98
CCL20-201ENST00000358813 NXT2Q9NPJ8 142 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms