RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 Q8N9P0 234 aaPredicted RBP6.06□□□□□ -1.44
SMG6-202ENST00000354901 CASC10Q5T4H9 136 aa6.05□□□□□ -1.44
SMG6-202ENST00000354901 SPAG11AQ6PDA7 123 aa6.05□□□□□ -1.44
SMG6-202ENST00000354901 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
SMG6-202ENST00000354901 A0A1W2PNM2 257 aa6.05□□□□□ -1.44
SMG6-202ENST00000354901 FAM168BA1KXE4 195 aa6.05□□□□□ -1.44
SMG6-202ENST00000354901 PCOTHQ58A44 107 aa6.05□□□□□ -1.44
SMG6-202ENST00000354901 LINC00528Q8N1L1 170 aa6.05□□□□□ -1.44
SMG6-202ENST00000354901 ANK2Q01484 3957 aa6.04□□□□□ -1.44
SMG6-202ENST00000354901 H3BNG1 76 aa6.04□□□□□ -1.44
SMG6-202ENST00000354901 NDUFB1O75438 58 aa6.04□□□□□ -1.44
SMG6-202ENST00000354901 LINC01556Q5JQF7 62 aa6.04□□□□□ -1.44
SMG6-202ENST00000354901 C7orf33Q8WU49 177 aa6.04□□□□□ -1.44
SMG6-202ENST00000354901 DSCR10P59022 87 aa6.03□□□□□ -1.44
SMG6-202ENST00000354901 Q8N377 158 aa6.03□□□□□ -1.44
SMG6-202ENST00000354901 ZCCHC13Q8WW36 166 aaKnown RBP6.03□□□□□ -1.44
SMG6-202ENST00000354901 H0Y9P7 68 aa6.02□□□□□ -1.44
SMG6-202ENST00000354901 PHF5AQ7RTV0 110 aaKnown RBP6.02□□□□□ -1.45
SMG6-202ENST00000354901 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
SMG6-202ENST00000354901 PRR26Q8N8Z3 221 aa6.01□□□□□ -1.45
SMG6-202ENST00000354901 STAB2Q8WWQ8 2551 aa6.01□□□□□ -1.45
SMG6-202ENST00000354901 A6NN06 94 aa6□□□□□ -1.45
SMG6-202ENST00000354901 COA5Q86WW8 74 aa6□□□□□ -1.45
SMG6-202ENST00000354901 MOBPQ13875 183 aa5.99□□□□□ -1.45
SMG6-202ENST00000354901 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
SMG6-202ENST00000354901 LINC00313P59037 77 aa5.98□□□□□ -1.45
SMG6-202ENST00000354901 CASC2Q6XLA1 102 aa5.98□□□□□ -1.45
SMG6-202ENST00000354901 ADM2Q7Z4H4 148 aa5.98□□□□□ -1.45
SMG6-202ENST00000354901 Q8NBF4 154 aa5.98□□□□□ -1.45
SMG6-202ENST00000354901 A0A087WSZ3 146 aa5.97□□□□□ -1.45
SMG6-202ENST00000354901 DNAH10OSP0CZ25 163 aa5.97□□□□□ -1.45
SMG6-202ENST00000354901 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
SMG6-202ENST00000354901 TENM2Q9NT68 2774 aa5.97□□□□□ -1.45
SMG6-202ENST00000354901 A0A096LNI7 61 aa5.97□□□□□ -1.45
SMG6-202ENST00000354901 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
SMG6-202ENST00000354901 SPINK7P58062 85 aa5.97□□□□□ -1.45
SMG6-202ENST00000354901 KCNQ1DNQ9H478 68 aa5.97□□□□□ -1.45
SMG6-202ENST00000354901 IGKV2-24A0A0C4DH68 120 aa5.96□□□□□ -1.45
SMG6-202ENST00000354901 Q9BRP9 147 aa5.96□□□□□ -1.46
SMG6-202ENST00000354901 LCE6AA0A183 80 aa5.95□□□□□ -1.46
SMG6-202ENST00000354901 ZNF706Q9Y5V0 76 aaPredicted RBP5.95□□□□□ -1.46
SMG6-202ENST00000354901 Q6ZRX8 168 aa5.94□□□□□ -1.46
SMG6-202ENST00000354901 Q75L30 129 aa5.94□□□□□ -1.46
SMG6-202ENST00000354901 KRTAP7-1Q8IUC3 87 aa5.94□□□□□ -1.46
SMG6-202ENST00000354901 RETNLBQ9BQ08 111 aa5.93□□□□□ -1.46
SMG6-202ENST00000354901 IGLV1-50A0A075B6I6 118 aa5.93□□□□□ -1.46
SMG6-202ENST00000354901 H0Y9J4 135 aa5.93□□□□□ -1.46
SMG6-202ENST00000354901 CSMD3Q7Z407 3707 aa5.93□□□□□ -1.46
SMG6-202ENST00000354901 SRRM2Q9UQ35 2752 aaKnown RBP5.93□□□□□ -1.46
SMG6-202ENST00000354901 IGLV5-48A0A075B6I7 105 aa5.92□□□□□ -1.46
SMG6-202ENST00000354901 LINC00476Q8WZB0 136 aa5.92□□□□□ -1.46
SMG6-202ENST00000354901 DHRS4-AS1Q9P1J3 65 aa5.92□□□□□ -1.46
SMG6-202ENST00000354901 PRLHP81277 87 aa5.91□□□□□ -1.46
SMG6-202ENST00000354901 K7EIL1 84 aa5.9□□□□□ -1.46
SMG6-202ENST00000354901 TLX1NBP0CAT3 122 aa5.9□□□□□ -1.47
SMG6-202ENST00000354901 KRTAP4-16G5E9R7 235 aaPredicted RBP5.89□□□□□ -1.47
SMG6-202ENST00000354901 KRTAP1-5Q9BYS1 174 aa5.89□□□□□ -1.47
SMG6-202ENST00000354901 DNAH3Q8TD57 4116 aa5.88□□□□□ -1.47
SMG6-202ENST00000354901 REG3GQ6UW15 175 aa5.88□□□□□ -1.47
SMG6-202ENST00000354901 CHTF8P0CG12 524 aa5.87□□□□□ -1.47
SMG6-202ENST00000354901 UBE2DNLQ8IWF7 75 aa5.87□□□□□ -1.47
SMG6-202ENST00000354901 CMYA5Q8N3K9 4069 aa5.87□□□□□ -1.47
SMG6-202ENST00000354901 COL7A1Q02388 2944 aa5.86□□□□□ -1.47
SMG6-202ENST00000354901 SPRR1AP35321 89 aa5.86□□□□□ -1.47
SMG6-202ENST00000354901 PLA2G2DQ9UNK4 145 aa5.86□□□□□ -1.47
SMG6-202ENST00000354901 IGFL1Q6UW32 110 aa5.86□□□□□ -1.47
SMG6-202ENST00000354901 SPANXA2-OT1Q8N9U9 137 aa5.85□□□□□ -1.47
SMG6-202ENST00000354901 LYSTQ99698 3801 aa5.85□□□□□ -1.47
SMG6-202ENST00000354901 IGLV5-37A0A075B6J1 123 aa5.84□□□□□ -1.47
SMG6-202ENST00000354901 TNP2Q05952 138 aa5.84□□□□□ -1.47
SMG6-202ENST00000354901 SPRR4Q96PI1 79 aa5.84□□□□□ -1.47
SMG6-202ENST00000354901 DNAH10Q8IVF4 4471 aa5.82□□□□□ -1.48
SMG6-202ENST00000354901 CNBPP62633 177 aaKnown RBP5.82□□□□□ -1.48
SMG6-202ENST00000354901 KRTAP11-1Q8IUC1 163 aa5.81□□□□□ -1.48
SMG6-202ENST00000354901 HUWE1Q7Z6Z7 4374 aaKnown RBP5.8□□□□□ -1.48
SMG6-202ENST00000354901 C9orf163Q8N9P6 203 aa5.8□□□□□ -1.48
SMG6-202ENST00000354901 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
SMG6-202ENST00000354901 CSAG1Q6PB30 78 aa5.8□□□□□ -1.48
SMG6-202ENST00000354901 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
SMG6-202ENST00000354901 KRTAP29-1A8MX34 341 aaPredicted RBP5.78□□□□□ -1.48
SMG6-202ENST00000354901 HRES1P13985 223 aa5.78□□□□□ -1.48
SMG6-202ENST00000354901 A0A1B0GW54 56 aa5.77□□□□□ -1.49
SMG6-202ENST00000354901 C1orf134Q5TEV5 83 aa5.77□□□□□ -1.49
SMG6-202ENST00000354901 KRTAP21-3Q3LHN1 58 aa5.76□□□□□ -1.49
SMG6-202ENST00000354901 H3BPC8 53 aa5.76□□□□□ -1.49
SMG6-202ENST00000354901 PANO1I0J062 215 aa5.75□□□□□ -1.49
SMG6-202ENST00000354901 IGLV8-61A0A075B6I0 122 aa5.75□□□□□ -1.49
SMG6-202ENST00000354901 NUPR2A6NF83 97 aa5.75□□□□□ -1.49
SMG6-202ENST00000354901 A8MWP4 228 aa5.75□□□□□ -1.49
SMG6-202ENST00000354901 APLNQ9ULZ1 77 aa5.75□□□□□ -1.49
SMG6-202ENST00000354901 IGHV6-1A0A0B4J1U7 121 aa5.74□□□□□ -1.49
SMG6-202ENST00000354901 FLG2Q5D862 2391 aaPredicted RBP5.73□□□□□ -1.49
SMG6-202ENST00000354901 DNAH9Q9NYC9 4486 aa5.72□□□□□ -1.49
SMG6-202ENST00000354901 DNAH1Q9P2D7 4330 aa5.71□□□□□ -1.49
SMG6-202ENST00000354901 IGLV9-49A0A0B4J1Y8 123 aa5.71□□□□□ -1.49
SMG6-202ENST00000354901 A0A0A0MQY5 61 aa5.71□□□□□ -1.5
SMG6-202ENST00000354901 C14orf177Q52M58 125 aa5.71□□□□□ -1.5
SMG6-202ENST00000354901 MMP24-AS1A0A0U1RRL7 71 aa5.71□□□□□ -1.5
SMG6-202ENST00000354901 PLA2G1BP04054 148 aaKnown RBP5.71□□□□□ -1.5
SMG6-202ENST00000354901 DNAH7Q8WXX0 4024 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms