RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 A0A0G2JQZ4 141 aa6.53□□□□□ -1.36
SYNE1-203ENST00000354674 A0A1W2PNN7 141 aa6.53□□□□□ -1.36
SYNE1-203ENST00000354674 UBE2AP49459 152 aa6.53□□□□□ -1.36
SYNE1-203ENST00000354674 TGP01266 2768 aa6.53□□□□□ -1.36
SYNE1-203ENST00000354674 TENM2Q9NT68 2774 aa6.53□□□□□ -1.36
SYNE1-203ENST00000354674 WFDC13Q8IUB5 93 aa6.53□□□□□ -1.36
SYNE1-203ENST00000354674 DNAH6Q9C0G6 4158 aa6.53□□□□□ -1.36
SYNE1-203ENST00000354674 IGKV2D-24A0A075B6R9 120 aa6.52□□□□□ -1.37
SYNE1-203ENST00000354674 NBDYA0A0U1RRE5 68 aa6.52□□□□□ -1.37
SYNE1-203ENST00000354674 ERC2-IT1O76042 136 aa6.52□□□□□ -1.37
SYNE1-203ENST00000354674 C15orf56Q8N910 161 aa6.52□□□□□ -1.37
SYNE1-203ENST00000354674 COX7BP24311 80 aa6.51□□□□□ -1.37
SYNE1-203ENST00000354674 ALMS1Q8TCU4 4167 aa6.51□□□□□ -1.37
SYNE1-203ENST00000354674 ADM2Q7Z4H4 148 aa6.51□□□□□ -1.37
SYNE1-203ENST00000354674 LINC00208Q96KT6 92 aa6.51□□□□□ -1.37
SYNE1-203ENST00000354674 DNAH10Q8IVF4 4471 aa6.5□□□□□ -1.37
SYNE1-203ENST00000354674 GVQW2A0A096LPI5 108 aaPredicted RBP6.5□□□□□ -1.37
SYNE1-203ENST00000354674 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
SYNE1-203ENST00000354674 PDE6GP18545 87 aa6.49□□□□□ -1.37
SYNE1-203ENST00000354674 K7EQZ3 153 aa6.49□□□□□ -1.37
SYNE1-203ENST00000354674 Q6ZR54 194 aa6.48□□□□□ -1.37
SYNE1-203ENST00000354674 Q8N9P0 234 aaPredicted RBP6.48□□□□□ -1.37
SYNE1-203ENST00000354674 Q6ZRN7 208 aaPredicted RBP6.48□□□□□ -1.37
SYNE1-203ENST00000354674 KMT2AQ03164 3969 aa6.48□□□□□ -1.37
SYNE1-203ENST00000354674 SPAG11AQ6PDA7 123 aa6.47□□□□□ -1.37
SYNE1-203ENST00000354674 LINC00476Q8WZB0 136 aa6.47□□□□□ -1.37
SYNE1-203ENST00000354674 A6NN06 94 aa6.47□□□□□ -1.37
SYNE1-203ENST00000354674 COX17Q14061 63 aa6.47□□□□□ -1.37
SYNE1-203ENST00000354674 ETDCA0A1B0GVM5 59 aa6.46□□□□□ -1.38
SYNE1-203ENST00000354674 DNAH2Q9P225 4427 aa6.45□□□□□ -1.38
SYNE1-203ENST00000354674 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
SYNE1-203ENST00000354674 MOBPQ13875 183 aa6.45□□□□□ -1.38
SYNE1-203ENST00000354674 ATP11AUNQ6ZP68 121 aa6.45□□□□□ -1.38
SYNE1-203ENST00000354674 C6orf48Q9UBA6 75 aa6.45□□□□□ -1.38
SYNE1-203ENST00000354674 NDUFS5O43920 106 aa6.44□□□□□ -1.38
SYNE1-203ENST00000354674 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
SYNE1-203ENST00000354674 CAMK2N2Q96S95 79 aa6.43□□□□□ -1.38
SYNE1-203ENST00000354674 LY6G6CO95867 125 aa6.43□□□□□ -1.38
SYNE1-203ENST00000354674 IGLV6-57P01721 117 aa6.43□□□□□ -1.38
SYNE1-203ENST00000354674 RPL37AP61513 92 aaKnown RBP6.42□□□□□ -1.38
SYNE1-203ENST00000354674 LINC00313P59037 77 aa6.41□□□□□ -1.38
SYNE1-203ENST00000354674 SPINK7P58062 85 aa6.41□□□□□ -1.38
SYNE1-203ENST00000354674 ZCCHC13Q8WW36 166 aaKnown RBP6.41□□□□□ -1.38
SYNE1-203ENST00000354674 PCOTHQ58A44 107 aa6.41□□□□□ -1.38
SYNE1-203ENST00000354674 CNBPP62633 177 aaKnown RBP6.4□□□□□ -1.38
SYNE1-203ENST00000354674 C14orf177Q52M58 125 aa6.4□□□□□ -1.38
SYNE1-203ENST00000354674 HYDINQ4G0P3 5121 aa6.4□□□□□ -1.38
SYNE1-203ENST00000354674 DNAH17Q9UFH2 4485 aa6.4□□□□□ -1.39
SYNE1-203ENST00000354674 FRAS1Q86XX4 4008 aa6.4□□□□□ -1.39
SYNE1-203ENST00000354674 TLX1NBP0CAT3 122 aa6.4□□□□□ -1.39
SYNE1-203ENST00000354674 NKAPP1Q8N9T2 125 aa6.4□□□□□ -1.39
SYNE1-203ENST00000354674 DSCR10P59022 87 aa6.39□□□□□ -1.39
SYNE1-203ENST00000354674 SACSQ9NZJ4 4579 aa6.39□□□□□ -1.39
SYNE1-203ENST00000354674 MP68P56378 58 aa6.39□□□□□ -1.39
SYNE1-203ENST00000354674 PHF5AQ7RTV0 110 aaKnown RBP6.39□□□□□ -1.39
SYNE1-203ENST00000354674 LIMD2Q9BT23 127 aa6.39□□□□□ -1.39
SYNE1-203ENST00000354674 A0A1W2PNM2 257 aa6.38□□□□□ -1.39
SYNE1-203ENST00000354674 C1orf134Q5TEV5 83 aa6.38□□□□□ -1.39
SYNE1-203ENST00000354674 ELOF1P60002 83 aaKnown RBP6.37□□□□□ -1.39
SYNE1-203ENST00000354674 CYP4F30PQ9H0H9 118 aa6.37□□□□□ -1.39
SYNE1-203ENST00000354674 RPL37AP8A6NKH3 93 aa6.37□□□□□ -1.39
SYNE1-203ENST00000354674 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
SYNE1-203ENST00000354674 PRR26Q8N8Z3 221 aa6.36□□□□□ -1.39
SYNE1-203ENST00000354674 A0A087WTM6 91 aa6.36□□□□□ -1.39
SYNE1-203ENST00000354674 C1orf137Q5JT78 98 aa6.35□□□□□ -1.39
SYNE1-203ENST00000354674 COA5Q86WW8 74 aa6.35□□□□□ -1.39
SYNE1-203ENST00000354674 Q8N377 158 aa6.35□□□□□ -1.39
SYNE1-203ENST00000354674 H0Y9P7 68 aa6.34□□□□□ -1.39
SYNE1-203ENST00000354674 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
SYNE1-203ENST00000354674 LCE6AA0A183 80 aa6.34□□□□□ -1.39
SYNE1-203ENST00000354674 HECTD4Q9Y4D8 3996 aa6.34□□□□□ -1.39
SYNE1-203ENST00000354674 LOC101927531A0A1B0GV80 90 aa6.33□□□□□ -1.4
SYNE1-203ENST00000354674 C7orf33Q8WU49 177 aa6.33□□□□□ -1.4
SYNE1-203ENST00000354674 RTL8CO15255 209 aa6.33□□□□□ -1.4
SYNE1-203ENST00000354674 C9orf163Q8N9P6 203 aa6.33□□□□□ -1.4
SYNE1-203ENST00000354674 FAT2Q9NYQ8 4349 aa6.33□□□□□ -1.4
SYNE1-203ENST00000354674 Q75L30 129 aa6.32□□□□□ -1.4
SYNE1-203ENST00000354674 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
SYNE1-203ENST00000354674 PLA2G2DQ9UNK4 145 aa6.32□□□□□ -1.4
SYNE1-203ENST00000354674 DNAH11Q96DT5 4516 aa6.32□□□□□ -1.4
SYNE1-203ENST00000354674 NDUFB1O75438 58 aa6.32□□□□□ -1.4
SYNE1-203ENST00000354674 VPREB1P12018 145 aa6.31□□□□□ -1.4
SYNE1-203ENST00000354674 LINC01554Q52M75 96 aa6.31□□□□□ -1.4
SYNE1-203ENST00000354674 TNP2Q05952 138 aa6.3□□□□□ -1.4
SYNE1-203ENST00000354674 IGLV5-37A0A075B6J1 123 aa6.29□□□□□ -1.4
SYNE1-203ENST00000354674 KRTAP7-1Q8IUC3 87 aa6.29□□□□□ -1.4
SYNE1-203ENST00000354674 RYR2Q92736 4967 aa6.29□□□□□ -1.4
SYNE1-203ENST00000354674 PKD1P98161 4303 aa6.28□□□□□ -1.4
SYNE1-203ENST00000354674 A0A096LNI7 61 aa6.28□□□□□ -1.4
SYNE1-203ENST00000354674 A0A087WSZ3 146 aa6.27□□□□□ -1.41
SYNE1-203ENST00000354674 KMT2CQ8NEZ4 4911 aaKnown RBP6.26□□□□□ -1.41
SYNE1-203ENST00000354674 FAM168BA1KXE4 195 aa6.26□□□□□ -1.41
SYNE1-203ENST00000354674 H3BQ85 93 aa6.26□□□□□ -1.41
SYNE1-203ENST00000354674 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
SYNE1-203ENST00000354674 Q8NBF4 154 aa6.25□□□□□ -1.41
SYNE1-203ENST00000354674 CASC2Q6XLA1 102 aa6.24□□□□□ -1.41
SYNE1-203ENST00000354674 IGLV5-52A0A0A0MRZ9 124 aa6.24□□□□□ -1.41
SYNE1-203ENST00000354674 SPACA4Q8TDM5 124 aa6.23□□□□□ -1.41
SYNE1-203ENST00000354674 KRTAP10-2P60368 255 aa6.23□□□□□ -1.41
SYNE1-203ENST00000354674 DNAH8Q96JB1 4490 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms