RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
BRAT1-201ENST00000340611 COX7BP24311 80 aa9.76□□□□□ -0.85
BRAT1-201ENST00000340611 PRR15LQ9BU68 103 aa9.75□□□□□ -0.85
BRAT1-201ENST00000340611 ST20-AS1Q8NBB2 130 aa9.72□□□□□ -0.85
BRAT1-201ENST00000340611 UBE2AP49459 152 aa9.72□□□□□ -0.85
BRAT1-201ENST00000340611 ELOF1P60002 83 aaKnown RBP9.71□□□□□ -0.86
BRAT1-201ENST00000340611 CAMK2N2Q96S95 79 aa9.71□□□□□ -0.86
BRAT1-201ENST00000340611 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.7□□□□□ -0.86
BRAT1-201ENST00000340611 A6NED7 52 aa9.7□□□□□ -0.86
BRAT1-201ENST00000340611 LY6G6CO95867 125 aa9.7□□□□□ -0.86
BRAT1-201ENST00000340611 LCA10Q71F78 164 aa9.69□□□□□ -0.86
BRAT1-201ENST00000340611 WWC2-AS2Q96NR7 200 aa9.69□□□□□ -0.86
BRAT1-201ENST00000340611 NBDYA0A0U1RRE5 68 aa9.69□□□□□ -0.86
BRAT1-201ENST00000340611 DEFB105AQ8NG35 78 aa9.69□□□□□ -0.86
BRAT1-201ENST00000340611 HYDINQ4G0P3 5121 aa9.68□□□□□ -0.86
BRAT1-201ENST00000340611 DNAH2Q9P225 4427 aa9.68□□□□□ -0.86
BRAT1-201ENST00000340611 H3BS24 57 aa9.68□□□□□ -0.86
BRAT1-201ENST00000340611 DEFB116Q30KQ4 102 aa9.68□□□□□ -0.86
BRAT1-201ENST00000340611 H3BQ85 93 aa9.67□□□□□ -0.86
BRAT1-201ENST00000340611 VPREB1P12018 145 aa9.67□□□□□ -0.86
BRAT1-201ENST00000340611 GVQW2A0A096LPI5 108 aaPredicted RBP9.66□□□□□ -0.86
BRAT1-201ENST00000340611 C8orf87E5RJ46 101 aa9.65□□□□□ -0.87
BRAT1-201ENST00000340611 NDUFS5O43920 106 aa9.63□□□□□ -0.87
BRAT1-201ENST00000340611 LINC00528Q8N1L1 170 aa9.63□□□□□ -0.87
BRAT1-201ENST00000340611 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
BRAT1-201ENST00000340611 ETDCA0A1B0GVM5 59 aa9.63□□□□□ -0.87
BRAT1-201ENST00000340611 Q8N9P0 234 aaPredicted RBP9.63□□□□□ -0.87
BRAT1-201ENST00000340611 A6NN06 94 aa9.62□□□□□ -0.87
BRAT1-201ENST00000340611 ATP11AUNQ6ZP68 121 aa9.62□□□□□ -0.87
BRAT1-201ENST00000340611 CYP4F30PQ9H0H9 118 aa9.6□□□□□ -0.87
BRAT1-201ENST00000340611 Q6ZRN7 208 aaPredicted RBP9.59□□□□□ -0.87
BRAT1-201ENST00000340611 LINC00476Q8WZB0 136 aa9.58□□□□□ -0.88
BRAT1-201ENST00000340611 K7EQZ3 153 aa9.57□□□□□ -0.88
BRAT1-201ENST00000340611 LCE6AA0A183 80 aa9.57□□□□□ -0.88
BRAT1-201ENST00000340611 C7orf65Q6ZTY9 151 aa9.57□□□□□ -0.88
BRAT1-201ENST00000340611 LINC00208Q96KT6 92 aa9.57□□□□□ -0.88
BRAT1-201ENST00000340611 PHF5AQ7RTV0 110 aaKnown RBP9.56□□□□□ -0.88
BRAT1-201ENST00000340611 LIMD2Q9BT23 127 aa9.56□□□□□ -0.88
BRAT1-201ENST00000340611 Q6ZR54 194 aa9.55□□□□□ -0.88
BRAT1-201ENST00000340611 WFDC13Q8IUB5 93 aa9.55□□□□□ -0.88
BRAT1-201ENST00000340611 FAM168BA1KXE4 195 aa9.54□□□□□ -0.88
BRAT1-201ENST00000340611 Q8N377 158 aa9.54□□□□□ -0.88
BRAT1-201ENST00000340611 PRAC1Q96KF2 57 aa9.54□□□□□ -0.88
BRAT1-201ENST00000340611 HECTD4Q9Y4D8 3996 aa9.53□□□□□ -0.88
BRAT1-201ENST00000340611 IGKV2-24A0A0C4DH68 120 aa9.52□□□□□ -0.88
BRAT1-201ENST00000340611 FRAS1Q86XX4 4008 aa9.52□□□□□ -0.89
BRAT1-201ENST00000340611 MOBPQ13875 183 aa9.52□□□□□ -0.89
BRAT1-201ENST00000340611 SERTAD4-AS1Q5TG53 156 aa9.52□□□□□ -0.89
BRAT1-201ENST00000340611 CHTF8P0CG12 524 aa9.5□□□□□ -0.89
BRAT1-201ENST00000340611 DSCR10P59022 87 aa9.5□□□□□ -0.89
BRAT1-201ENST00000340611 NKAPP1Q8N9T2 125 aa9.5□□□□□ -0.89
BRAT1-201ENST00000340611 RPL37AP8A6NKH3 93 aa9.5□□□□□ -0.89
BRAT1-201ENST00000340611 SACSQ9NZJ4 4579 aa9.49□□□□□ -0.89
BRAT1-201ENST00000340611 MP68P56378 58 aa9.49□□□□□ -0.89
BRAT1-201ENST00000340611 C7orf33Q8WU49 177 aa9.49□□□□□ -0.89
BRAT1-201ENST00000340611 A0A1W2PNM2 257 aa9.49□□□□□ -0.89
BRAT1-201ENST00000340611 NDUFB1O75438 58 aa9.49□□□□□ -0.89
BRAT1-201ENST00000340611 ALMS1Q8TCU4 4167 aa9.49□□□□□ -0.89
BRAT1-201ENST00000340611 C1orf134Q5TEV5 83 aa9.49□□□□□ -0.89
BRAT1-201ENST00000340611 KMT2CQ8NEZ4 4911 aaKnown RBP9.48□□□□□ -0.89
BRAT1-201ENST00000340611 A0A096LNI7 61 aa9.48□□□□□ -0.89
BRAT1-201ENST00000340611 A0A087WTM6 91 aa9.47□□□□□ -0.89
BRAT1-201ENST00000340611 TNP2Q05952 138 aa9.47□□□□□ -0.89
BRAT1-201ENST00000340611 Q75L30 129 aa9.47□□□□□ -0.89
BRAT1-201ENST00000340611 DNAH6Q9C0G6 4158 aa9.46□□□□□ -0.89
BRAT1-201ENST00000340611 KRTAP7-1Q8IUC3 87 aa9.46□□□□□ -0.89
BRAT1-201ENST00000340611 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.9
BRAT1-201ENST00000340611 IGLV5-48A0A075B6I7 105 aa9.46□□□□□ -0.9
BRAT1-201ENST00000340611 KCNQ1DNQ9H478 68 aa9.46□□□□□ -0.9
BRAT1-201ENST00000340611 CDC42SE1Q9NRR8 79 aa9.46□□□□□ -0.9
BRAT1-201ENST00000340611 A0A0G2JQZ4 141 aa9.45□□□□□ -0.9
BRAT1-201ENST00000340611 A0A1W2PNN7 141 aa9.45□□□□□ -0.9
BRAT1-201ENST00000340611 C1orf137Q5JT78 98 aa9.45□□□□□ -0.9
BRAT1-201ENST00000340611 SPAG11AQ6PDA7 123 aa9.45□□□□□ -0.9
BRAT1-201ENST00000340611 PANO1I0J062 215 aa9.45□□□□□ -0.9
BRAT1-201ENST00000340611 Q9BRP9 147 aa9.44□□□□□ -0.9
BRAT1-201ENST00000340611 ADM2Q7Z4H4 148 aa9.44□□□□□ -0.9
BRAT1-201ENST00000340611 CNBPP62633 177 aaKnown RBP9.43□□□□□ -0.9
BRAT1-201ENST00000340611 RTL8CO15255 209 aa9.42□□□□□ -0.9
BRAT1-201ENST00000340611 LINC00313P59037 77 aa9.42□□□□□ -0.9
BRAT1-201ENST00000340611 SRRM2Q9UQ35 2752 aaKnown RBP9.42□□□□□ -0.9
BRAT1-201ENST00000340611 TLX1NBP0CAT3 122 aa9.42□□□□□ -0.9
BRAT1-201ENST00000340611 LOC101927531A0A1B0GV80 90 aa9.41□□□□□ -0.9
BRAT1-201ENST00000340611 C14orf177Q52M58 125 aa9.41□□□□□ -0.9
BRAT1-201ENST00000340611 Q6ZRX8 168 aa9.41□□□□□ -0.9
BRAT1-201ENST00000340611 SPINK7P58062 85 aa9.41□□□□□ -0.9
BRAT1-201ENST00000340611 COA5Q86WW8 74 aa9.41□□□□□ -0.9
BRAT1-201ENST00000340611 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.9
BRAT1-201ENST00000340611 C9orf163Q8N9P6 203 aa9.4□□□□□ -0.9
BRAT1-201ENST00000340611 Q8NBF4 154 aa9.4□□□□□ -0.9
BRAT1-201ENST00000340611 H0Y9P7 68 aa9.39□□□□□ -0.91
BRAT1-201ENST00000340611 DNAH11Q96DT5 4516 aa9.39□□□□□ -0.91
BRAT1-201ENST00000340611 RPL37AP61513 92 aaKnown RBP9.38□□□□□ -0.91
BRAT1-201ENST00000340611 DHRS4-AS1Q9P1J3 65 aa9.38□□□□□ -0.91
BRAT1-201ENST00000340611 KRTAP10-2P60368 255 aa9.38□□□□□ -0.91
BRAT1-201ENST00000340611 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
BRAT1-201ENST00000340611 PKD1P98161 4303 aa9.36□□□□□ -0.91
BRAT1-201ENST00000340611 DNAH5Q8TE73 4624 aa9.36□□□□□ -0.91
BRAT1-201ENST00000340611 KRTAP4-16G5E9R7 235 aaPredicted RBP9.35□□□□□ -0.91
BRAT1-201ENST00000340611 IGLV1-50A0A075B6I6 118 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms