RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 Q9BRP9 147 aa5.35□□□□□ -1.55
HPS4-201ENST00000336873 LOC110117498A0A087WWA1 95 aa5.35□□□□□ -1.55
HPS4-201ENST00000336873 CXCL6P80162 114 aa5.35□□□□□ -1.55
HPS4-201ENST00000336873 OBSCN-AS1Q96MR7 158 aa5.35□□□□□ -1.55
HPS4-201ENST00000336873 ANAPC11Q9NYG5 84 aa5.35□□□□□ -1.55
HPS4-201ENST00000336873 Q6ZRX8 168 aa5.34□□□□□ -1.55
HPS4-201ENST00000336873 LY6G6CO95867 125 aa5.34□□□□□ -1.55
HPS4-201ENST00000336873 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
HPS4-201ENST00000336873 K7EQZ3 153 aa5.33□□□□□ -1.56
HPS4-201ENST00000336873 BCE1O60756 84 aa5.33□□□□□ -1.56
HPS4-201ENST00000336873 LINC00476Q8WZB0 136 aa5.33□□□□□ -1.56
HPS4-201ENST00000336873 KLKP1Q107X0 134 aa5.33□□□□□ -1.56
HPS4-201ENST00000336873 RETNLBQ9BQ08 111 aa5.33□□□□□ -1.56
HPS4-201ENST00000336873 MP68P56378 58 aa5.32□□□□□ -1.56
HPS4-201ENST00000336873 PCOTHQ58A44 107 aa5.32□□□□□ -1.56
HPS4-201ENST00000336873 GVQW2A0A096LPI5 108 aaPredicted RBP5.31□□□□□ -1.56
HPS4-201ENST00000336873 IGKV4-1P06312 121 aa5.31□□□□□ -1.56
HPS4-201ENST00000336873 B9D2Q9BPU9 175 aa5.31□□□□□ -1.56
HPS4-201ENST00000336873 DNAH3Q8TD57 4116 aa5.31□□□□□ -1.56
HPS4-201ENST00000336873 A8MUN3 132 aa5.31□□□□□ -1.56
HPS4-201ENST00000336873 FAM229BQ4G0N7 80 aa5.31□□□□□ -1.56
HPS4-201ENST00000336873 PRR15Q8IV56 129 aa5.31□□□□□ -1.56
HPS4-201ENST00000336873 MDFIQ99750 246 aa5.31□□□□□ -1.56
HPS4-201ENST00000336873 PRR15LQ9BU68 103 aa5.31□□□□□ -1.56
HPS4-201ENST00000336873 TRBV7-4A0A0J9YYF1 115 aa5.3□□□□□ -1.56
HPS4-201ENST00000336873 A0A1W2PNM2 257 aa5.3□□□□□ -1.56
HPS4-201ENST00000336873 FRAS1Q86XX4 4008 aa5.3□□□□□ -1.56
HPS4-201ENST00000336873 IGLV1-50A0A075B6I6 118 aa5.3□□□□□ -1.56
HPS4-201ENST00000336873 NDUFB1O75438 58 aa5.3□□□□□ -1.56
HPS4-201ENST00000336873 EPM2AB3EWF7 344 aa5.29□□□□□ -1.56
HPS4-201ENST00000336873 KTN1-AS1Q86SY8 53 aa5.29□□□□□ -1.56
HPS4-201ENST00000336873 IGHV6-1A0A0B4J1U7 121 aa5.29□□□□□ -1.56
HPS4-201ENST00000336873 KCNQ1DNQ9H478 68 aa5.28□□□□□ -1.56
HPS4-201ENST00000336873 H3BNG1 76 aa5.28□□□□□ -1.56
HPS4-201ENST00000336873 Q8NBF4 154 aa5.28□□□□□ -1.56
HPS4-201ENST00000336873 CIRBP-AS1Q8TBR5 109 aa5.28□□□□□ -1.56
HPS4-201ENST00000336873 KRTAP1-5Q9BYS1 174 aa5.28□□□□□ -1.56
HPS4-201ENST00000336873 HCG22E2RYF7 251 aa5.26□□□□□ -1.57
HPS4-201ENST00000336873 C14orf177Q52M58 125 aa5.26□□□□□ -1.57
HPS4-201ENST00000336873 IGFL1Q6UW32 110 aa5.26□□□□□ -1.57
HPS4-201ENST00000336873 CASC2Q6XLA1 102 aa5.25□□□□□ -1.57
HPS4-201ENST00000336873 NUPR2A6NF83 97 aa5.25□□□□□ -1.57
HPS4-201ENST00000336873 DMBT1Q9UGM3 2413 aaPredicted RBP5.25□□□□□ -1.57
HPS4-201ENST00000336873 TRAV22A0A0B4J277 110 aa5.25□□□□□ -1.57
HPS4-201ENST00000336873 KRTAP26-1Q6PEX3 210 aa5.25□□□□□ -1.57
HPS4-201ENST00000336873 MOBPQ13875 183 aa5.24□□□□□ -1.57
HPS4-201ENST00000336873 C16orf90A8MZG2 172 aa5.22□□□□□ -1.57
HPS4-201ENST00000336873 C1orf64Q8NEQ6 169 aa5.22□□□□□ -1.57
HPS4-201ENST00000336873 H0Y9P7 68 aa5.21□□□□□ -1.57
HPS4-201ENST00000336873 FBN3Q75N90 2809 aa5.21□□□□□ -1.57
HPS4-201ENST00000336873 NBDYA0A0U1RRE5 68 aa5.2□□□□□ -1.58
HPS4-201ENST00000336873 IGLV5-52A0A0A0MRZ9 124 aa5.2□□□□□ -1.58
HPS4-201ENST00000336873 A0A1B0GW54 56 aa5.19□□□□□ -1.58
HPS4-201ENST00000336873 PANO1I0J062 215 aa5.18□□□□□ -1.58
HPS4-201ENST00000336873 DSCR10P59022 87 aa5.18□□□□□ -1.58
HPS4-201ENST00000336873 LCA10Q71F78 164 aa5.17□□□□□ -1.58
HPS4-201ENST00000336873 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.17□□□□□ -1.58
HPS4-201ENST00000336873 hDV103S1A0JD37 113 aa5.17□□□□□ -1.58
HPS4-201ENST00000336873 C7orf65Q6ZTY9 151 aa5.17□□□□□ -1.58
HPS4-201ENST00000336873 KRTAP7-1Q8IUC3 87 aa5.17□□□□□ -1.58
HPS4-201ENST00000336873 LIMD2Q9BT23 127 aa5.17□□□□□ -1.58
HPS4-201ENST00000336873 KRTAP11-1Q8IUC1 163 aa5.16□□□□□ -1.58
HPS4-201ENST00000336873 IGLV5-48A0A075B6I7 105 aa5.16□□□□□ -1.58
HPS4-201ENST00000336873 ATP11AUNQ6ZP68 121 aa5.16□□□□□ -1.58
HPS4-201ENST00000336873 C8orf87E5RJ46 101 aa5.15□□□□□ -1.58
HPS4-201ENST00000336873 RTL8CO15255 209 aa5.15□□□□□ -1.58
HPS4-201ENST00000336873 OCR1Q9BZK8 76 aa5.15□□□□□ -1.58
HPS4-201ENST00000336873 Q1T7F1 81 aa5.14□□□□□ -1.59
HPS4-201ENST00000336873 C9orf163Q8N9P6 203 aa5.14□□□□□ -1.59
HPS4-201ENST00000336873 C1orf134Q5TEV5 83 aa5.13□□□□□ -1.59
HPS4-201ENST00000336873 APLNQ9ULZ1 77 aa5.13□□□□□ -1.59
HPS4-201ENST00000336873 A8MU10 97 aa5.13□□□□□ -1.59
HPS4-201ENST00000336873 TLX1NBP0CAT3 122 aa5.13□□□□□ -1.59
HPS4-201ENST00000336873 SPAG11AQ6PDA7 123 aa5.13□□□□□ -1.59
HPS4-201ENST00000336873 FLG2Q5D862 2391 aaPredicted RBP5.13□□□□□ -1.59
HPS4-201ENST00000336873 SPACA4Q8TDM5 124 aa5.12□□□□□ -1.59
HPS4-201ENST00000336873 SPINK1P00995 79 aa5.12□□□□□ -1.59
HPS4-201ENST00000336873 PSORS1C2Q9UIG4 136 aa5.12□□□□□ -1.59
HPS4-201ENST00000336873 HUWE1Q7Z6Z7 4374 aaKnown RBP5.12□□□□□ -1.59
HPS4-201ENST00000336873 HECTD4Q9Y4D8 3996 aa5.12□□□□□ -1.59
HPS4-201ENST00000336873 PLA2G2DQ9UNK4 145 aa5.1□□□□□ -1.59
HPS4-201ENST00000336873 PRAC1Q96KF2 57 aa5.1□□□□□ -1.59
HPS4-201ENST00000336873 A0A087WTM6 91 aa5.09□□□□□ -1.59
HPS4-201ENST00000336873 ZNF706Q9Y5V0 76 aaPredicted RBP5.09□□□□□ -1.59
HPS4-201ENST00000336873 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
HPS4-201ENST00000336873 IGKV2-30P06310 120 aa5.08□□□□□ -1.6
HPS4-201ENST00000336873 SPRR1AP35321 89 aa5.08□□□□□ -1.6
HPS4-201ENST00000336873 KRTAP4-16G5E9R7 235 aaPredicted RBP5.08□□□□□ -1.6
HPS4-201ENST00000336873 A8MWP4 228 aa5.08□□□□□ -1.6
HPS4-201ENST00000336873 SMR3BP02814 79 aaPredicted RBP5.08□□□□□ -1.6
HPS4-201ENST00000336873 KMT2AQ03164 3969 aa5.07□□□□□ -1.6
HPS4-201ENST00000336873 CYP4F30PQ9H0H9 118 aa5.07□□□□□ -1.6
HPS4-201ENST00000336873 IGLV8-61A0A075B6I0 122 aa5.07□□□□□ -1.6
HPS4-201ENST00000336873 TNP2Q05952 138 aa5.07□□□□□ -1.6
HPS4-201ENST00000336873 Q5VV11 94 aa5.07□□□□□ -1.6
HPS4-201ENST00000336873 SPRR4Q96PI1 79 aa5.07□□□□□ -1.6
HPS4-201ENST00000336873 IGLV5-37A0A075B6J1 123 aa5.06□□□□□ -1.6
HPS4-201ENST00000336873 CNBPP62633 177 aaKnown RBP5.06□□□□□ -1.6
HPS4-201ENST00000336873 LINC01554Q52M75 96 aa5.05□□□□□ -1.6
HPS4-201ENST00000336873 WWC2-AS2Q96NR7 200 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms