RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 C7orf33Q8WU49 177 aa11.73□□□□□ -0.53
PKP3-201ENST00000331563 DNAH3Q8TD57 4116 aa11.72□□□□□ -0.53
PKP3-201ENST00000331563 MP68P56378 58 aa11.72□□□□□ -0.53
PKP3-201ENST00000331563 WFDC10BQ8IUB3 73 aa11.72□□□□□ -0.53
PKP3-201ENST00000331563 WFDC13Q8IUB5 93 aa11.72□□□□□ -0.53
PKP3-201ENST00000331563 DHRS4-AS1Q9P1J3 65 aa11.72□□□□□ -0.53
PKP3-201ENST00000331563 SERTAD4-AS1Q5TG53 156 aa11.71□□□□□ -0.53
PKP3-201ENST00000331563 C15orf56Q8N910 161 aa11.71□□□□□ -0.54
PKP3-201ENST00000331563 A6NED7 52 aa11.7□□□□□ -0.54
PKP3-201ENST00000331563 COL7A1Q02388 2944 aa11.7□□□□□ -0.54
PKP3-201ENST00000331563 C7orf65Q6ZTY9 151 aa11.69□□□□□ -0.54
PKP3-201ENST00000331563 LINC00208Q96KT6 92 aa11.69□□□□□ -0.54
PKP3-201ENST00000331563 Q6ZRX8 168 aa11.68□□□□□ -0.54
PKP3-201ENST00000331563 Q75L30 129 aa11.68□□□□□ -0.54
PKP3-201ENST00000331563 Q9BRP9 147 aa11.68□□□□□ -0.54
PKP3-201ENST00000331563 STAB2Q8WWQ8 2551 aa11.67□□□□□ -0.54
PKP3-201ENST00000331563 IGKV2D-24A0A075B6R9 120 aa11.66□□□□□ -0.54
PKP3-201ENST00000331563 SPRR4Q96PI1 79 aa11.66□□□□□ -0.54
PKP3-201ENST00000331563 C8orf87E5RJ46 101 aa11.65□□□□□ -0.54
PKP3-201ENST00000331563 TNP2Q05952 138 aa11.64□□□□□ -0.55
PKP3-201ENST00000331563 A0A0G2JQZ4 141 aa11.64□□□□□ -0.55
PKP3-201ENST00000331563 A0A1W2PNN7 141 aa11.64□□□□□ -0.55
PKP3-201ENST00000331563 CDC42SE1Q9NRR8 79 aa11.63□□□□□ -0.55
PKP3-201ENST00000331563 KRTAP26-1Q6PEX3 210 aa11.63□□□□□ -0.55
PKP3-201ENST00000331563 LYSTQ99698 3801 aa11.63□□□□□ -0.55
PKP3-201ENST00000331563 TENM2Q9NT68 2774 aa11.62□□□□□ -0.55
PKP3-201ENST00000331563 LOC101927531A0A1B0GV80 90 aa11.62□□□□□ -0.55
PKP3-201ENST00000331563 SPANXA2-OT1Q8N9U9 137 aa11.62□□□□□ -0.55
PKP3-201ENST00000331563 FAM168BA1KXE4 195 aa11.59□□□□□ -0.55
PKP3-201ENST00000331563 HUWE1Q7Z6Z7 4374 aaKnown RBP11.59□□□□□ -0.55
PKP3-201ENST00000331563 LINC00476Q8WZB0 136 aa11.58□□□□□ -0.56
PKP3-201ENST00000331563 MDFIQ99750 246 aa11.58□□□□□ -0.56
PKP3-201ENST00000331563 H0Y9P7 68 aa11.57□□□□□ -0.56
PKP3-201ENST00000331563 RPL37AP61513 92 aaKnown RBP11.55□□□□□ -0.56
PKP3-201ENST00000331563 MOBPQ13875 183 aa11.55□□□□□ -0.56
PKP3-201ENST00000331563 IGLV1-50A0A075B6I6 118 aa11.55□□□□□ -0.56
PKP3-201ENST00000331563 A0A087WSZ3 146 aa11.54□□□□□ -0.56
PKP3-201ENST00000331563 KRTAP4-16G5E9R7 235 aaPredicted RBP11.54□□□□□ -0.56
PKP3-201ENST00000331563 DEFB131BA0A096LNP1 70 aa11.53□□□□□ -0.56
PKP3-201ENST00000331563 K7EIL1 84 aa11.53□□□□□ -0.56
PKP3-201ENST00000331563 H3BS24 57 aa11.5□□□□□ -0.57
PKP3-201ENST00000331563 IGFL1Q6UW32 110 aa11.5□□□□□ -0.57
PKP3-201ENST00000331563 CASC2Q6XLA1 102 aa11.5□□□□□ -0.57
PKP3-201ENST00000331563 SPRR1AP35321 89 aa11.49□□□□□ -0.57
PKP3-201ENST00000331563 COA5Q86WW8 74 aa11.47□□□□□ -0.57
PKP3-201ENST00000331563 CSMD3Q7Z407 3707 aa11.46□□□□□ -0.57
PKP3-201ENST00000331563 H3BPC8 53 aa11.46□□□□□ -0.58
PKP3-201ENST00000331563 DNHD1Q96M86 4753 aa11.45□□□□□ -0.58
PKP3-201ENST00000331563 PLA2G2DQ9UNK4 145 aa11.44□□□□□ -0.58
PKP3-201ENST00000331563 REG3GQ6UW15 175 aa11.42□□□□□ -0.58
PKP3-201ENST00000331563 KRTAP29-1A8MX34 341 aaPredicted RBP11.42□□□□□ -0.58
PKP3-201ENST00000331563 C9orf163Q8N9P6 203 aa11.42□□□□□ -0.58
PKP3-201ENST00000331563 DNAH9Q9NYC9 4486 aa11.41□□□□□ -0.58
PKP3-201ENST00000331563 TLX1NBP0CAT3 122 aa11.41□□□□□ -0.58
PKP3-201ENST00000331563 LINC01556Q5JQF7 62 aa11.4□□□□□ -0.58
PKP3-201ENST00000331563 KRTAP7-1Q8IUC3 87 aa11.4□□□□□ -0.58
PKP3-201ENST00000331563 LINC01558Q9Y6Z2 57 aa11.4□□□□□ -0.59
PKP3-201ENST00000331563 IGLV5-37A0A075B6J1 123 aa11.39□□□□□ -0.59
PKP3-201ENST00000331563 PRLHP81277 87 aa11.39□□□□□ -0.59
PKP3-201ENST00000331563 LINC00313P59037 77 aa11.38□□□□□ -0.59
PKP3-201ENST00000331563 DNAH7Q8WXX0 4024 aa11.38□□□□□ -0.59
PKP3-201ENST00000331563 H3BNG1 76 aa11.38□□□□□ -0.59
PKP3-201ENST00000331563 DNAH10Q8IVF4 4471 aa11.38□□□□□ -0.59
PKP3-201ENST00000331563 CNBPP62633 177 aaKnown RBP11.37□□□□□ -0.59
PKP3-201ENST00000331563 PCOTHQ58A44 107 aa11.37□□□□□ -0.59
PKP3-201ENST00000331563 SPAG11AQ6PDA7 123 aa11.37□□□□□ -0.59
PKP3-201ENST00000331563 PLAC8Q9NZF1 115 aa11.36□□□□□ -0.59
PKP3-201ENST00000331563 SPINK7P58062 85 aa11.36□□□□□ -0.59
PKP3-201ENST00000331563 H0Y9J4 135 aa11.35□□□□□ -0.59
PKP3-201ENST00000331563 IGLV7-46A0A075B6I9 117 aa11.35□□□□□ -0.59
PKP3-201ENST00000331563 CASC10Q5T4H9 136 aa11.34□□□□□ -0.59
PKP3-201ENST00000331563 MEGF8Q7Z7M0 2845 aa11.34□□□□□ -0.59
PKP3-201ENST00000331563 PRAC1Q96KF2 57 aa11.34□□□□□ -0.59
PKP3-201ENST00000331563 PRKDCP78527 4128 aaKnown RBP11.33□□□□□ -0.6
PKP3-201ENST00000331563 A8MWP4 228 aa11.32□□□□□ -0.6
PKP3-201ENST00000331563 LINC01554Q52M75 96 aa11.31□□□□□ -0.6
PKP3-201ENST00000331563 A0A096LNI7 61 aa11.29□□□□□ -0.6
PKP3-201ENST00000331563 IGKV2-24A0A0C4DH68 120 aa11.27□□□□□ -0.61
PKP3-201ENST00000331563 TGP01266 2768 aa11.26□□□□□ -0.61
PKP3-201ENST00000331563 IGLV8-61A0A075B6I0 122 aa11.26□□□□□ -0.61
PKP3-201ENST00000331563 SRRM2Q9UQ35 2752 aaKnown RBP11.26□□□□□ -0.61
PKP3-201ENST00000331563 DNAH1Q9P2D7 4330 aa11.25□□□□□ -0.61
PKP3-201ENST00000331563 PLECQ15149 4684 aaKnown RBP11.25□□□□□ -0.61
PKP3-201ENST00000331563 DNAH10OSP0CZ25 163 aa11.23□□□□□ -0.61
PKP3-201ENST00000331563 LINC00472Q9H8W2 130 aa11.23□□□□□ -0.61
PKP3-201ENST00000331563 ADM2Q7Z4H4 148 aa11.22□□□□□ -0.61
PKP3-201ENST00000331563 MMP24-AS1A0A0U1RRL7 71 aa11.2□□□□□ -0.62
PKP3-201ENST00000331563 PLA2G1BP04054 148 aaKnown RBP11.2□□□□□ -0.62
PKP3-201ENST00000331563 PRR26Q8N8Z3 221 aa11.17□□□□□ -0.62
PKP3-201ENST00000331563 STARD9Q9P2P6 4700 aa11.17□□□□□ -0.62
PKP3-201ENST00000331563 KRTAP1-5Q9BYS1 174 aa11.17□□□□□ -0.62
PKP3-201ENST00000331563 TP53AIP1Q9HCN2 124 aa11.12□□□□□ -0.63
PKP3-201ENST00000331563 HRES1P13985 223 aa11.11□□□□□ -0.63
PKP3-201ENST00000331563 UBE2DNLQ8IWF7 75 aa11.1□□□□□ -0.63
PKP3-201ENST00000331563 ASB16-AS1Q495Z4 193 aa11.08□□□□□ -0.63
PKP3-201ENST00000331563 FBN3Q75N90 2809 aa11.08□□□□□ -0.64
PKP3-201ENST00000331563 KMT2AQ03164 3969 aa11.07□□□□□ -0.64
PKP3-201ENST00000331563 APLNQ9ULZ1 77 aa11.06□□□□□ -0.64
PKP3-201ENST00000331563 DYNC2H1Q8NCM8 4307 aaKnown RBP11.04□□□□□ -0.64
PKP3-201ENST00000331563 IGHV6-1A0A0B4J1U7 121 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms