RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 STAB1Q9NY15 2570 aa5.09□□□□□ -1.59
VMA21-201ENST00000330374 FBN1P35555 2871 aaKnown RBP5.09□□□□□ -1.59
VMA21-201ENST00000330374 CASC10Q5T4H9 136 aa5.09□□□□□ -1.6
VMA21-201ENST00000330374 Q6ZRX8 168 aa5.09□□□□□ -1.6
VMA21-201ENST00000330374 IGLV5-48A0A075B6I7 105 aa5.08□□□□□ -1.6
VMA21-201ENST00000330374 DSCR10P59022 87 aa5.08□□□□□ -1.6
VMA21-201ENST00000330374 Q8NBF4 154 aa5.08□□□□□ -1.6
VMA21-201ENST00000330374 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.08□□□□□ -1.6
VMA21-201ENST00000330374 hDV103S1A0JD37 113 aa5.08□□□□□ -1.6
VMA21-201ENST00000330374 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
VMA21-201ENST00000330374 CSMD3Q7Z407 3707 aa5.07□□□□□ -1.6
VMA21-201ENST00000330374 RPL37AP61513 92 aaKnown RBP5.07□□□□□ -1.6
VMA21-201ENST00000330374 NBEAL1Q6ZS30 2694 aa5.07□□□□□ -1.6
VMA21-201ENST00000330374 PSCAO43653 123 aa5.06□□□□□ -1.6
VMA21-201ENST00000330374 DEFB131BA0A096LNP1 70 aa5.06□□□□□ -1.6
VMA21-201ENST00000330374 IGKV2-24A0A0C4DH68 120 aa5.05□□□□□ -1.6
VMA21-201ENST00000330374 HCG22E2RYF7 251 aa5.05□□□□□ -1.6
VMA21-201ENST00000330374 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
VMA21-201ENST00000330374 IGLV1-50A0A075B6I6 118 aa5.05□□□□□ -1.6
VMA21-201ENST00000330374 PRLHP81277 87 aa5.05□□□□□ -1.6
VMA21-201ENST00000330374 LINC00208Q96KT6 92 aa5.05□□□□□ -1.6
VMA21-201ENST00000330374 IGKV2D-30A0A075B6S6 120 aa5.04□□□□□ -1.6
VMA21-201ENST00000330374 A0A087WSZ3 146 aa5.04□□□□□ -1.6
VMA21-201ENST00000330374 A0A096LNI7 61 aa5.04□□□□□ -1.6
VMA21-201ENST00000330374 A8MUN3 132 aa5.04□□□□□ -1.6
VMA21-201ENST00000330374 TRAV22A0A0B4J277 110 aa5.03□□□□□ -1.6
VMA21-201ENST00000330374 A8MU10 97 aa5.03□□□□□ -1.6
VMA21-201ENST00000330374 LINC01556Q5JQF7 62 aa5.03□□□□□ -1.6
VMA21-201ENST00000330374 KRTAP7-1Q8IUC3 87 aa5.03□□□□□ -1.6
VMA21-201ENST00000330374 ANK2Q01484 3957 aa5.03□□□□□ -1.6
VMA21-201ENST00000330374 IGLV8-61A0A075B6I0 122 aa5.02□□□□□ -1.61
VMA21-201ENST00000330374 CHTF8P0CG12 524 aa5.02□□□□□ -1.61
VMA21-201ENST00000330374 KRTAP4-16G5E9R7 235 aaPredicted RBP5.02□□□□□ -1.61
VMA21-201ENST00000330374 IGFL1Q6UW32 110 aa5.01□□□□□ -1.61
VMA21-201ENST00000330374 ZCCHC13Q8WW36 166 aaKnown RBP5.01□□□□□ -1.61
VMA21-201ENST00000330374 SPRR4Q96PI1 79 aa5.01□□□□□ -1.61
VMA21-201ENST00000330374 KRTAP10-11P60412 298 aa5□□□□□ -1.61
VMA21-201ENST00000330374 Q1T7F1 81 aa4.99□□□□□ -1.61
VMA21-201ENST00000330374 COL7A1Q02388 2944 aa4.99□□□□□ -1.61
VMA21-201ENST00000330374 LCE6AA0A183 80 aa4.99□□□□□ -1.61
VMA21-201ENST00000330374 SPRR1AP35321 89 aa4.98□□□□□ -1.61
VMA21-201ENST00000330374 B9D2Q9BPU9 175 aa4.98□□□□□ -1.61
VMA21-201ENST00000330374 H0Y9P7 68 aa4.98□□□□□ -1.61
VMA21-201ENST00000330374 H3BNG1 76 aa4.98□□□□□ -1.61
VMA21-201ENST00000330374 KMT2BQ9UMN6 2715 aaPredicted RBP4.98□□□□□ -1.61
VMA21-201ENST00000330374 LINC00588Q9Y4M8 146 aa4.98□□□□□ -1.61
VMA21-201ENST00000330374 CHKB-CPT1BH3BT56 60 aa4.97□□□□□ -1.61
VMA21-201ENST00000330374 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
VMA21-201ENST00000330374 SPTSSBQ8NFR3 76 aa4.97□□□□□ -1.61
VMA21-201ENST00000330374 CASC2Q6XLA1 102 aa4.97□□□□□ -1.61
VMA21-201ENST00000330374 A0A1B0GW54 56 aa4.96□□□□□ -1.62
VMA21-201ENST00000330374 H0Y9J4 135 aa4.96□□□□□ -1.62
VMA21-201ENST00000330374 PRR15Q8IV56 129 aa4.96□□□□□ -1.62
VMA21-201ENST00000330374 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
VMA21-201ENST00000330374 TENM2Q9NT68 2774 aa4.96□□□□□ -1.62
VMA21-201ENST00000330374 TLX1NBP0CAT3 122 aa4.96□□□□□ -1.62
VMA21-201ENST00000330374 NDUFB1O75438 58 aa4.96□□□□□ -1.62
VMA21-201ENST00000330374 DNAH10OSP0CZ25 163 aa4.96□□□□□ -1.62
VMA21-201ENST00000330374 PCOTHQ58A44 107 aa4.95□□□□□ -1.62
VMA21-201ENST00000330374 CYP4F30PQ9H0H9 118 aa4.94□□□□□ -1.62
VMA21-201ENST00000330374 J3QKU1 62 aa4.94□□□□□ -1.62
VMA21-201ENST00000330374 STAB2Q8WWQ8 2551 aa4.94□□□□□ -1.62
VMA21-201ENST00000330374 DNAH10Q8IVF4 4471 aa4.94□□□□□ -1.62
VMA21-201ENST00000330374 Q5VV11 94 aa4.93□□□□□ -1.62
VMA21-201ENST00000330374 MGAM2Q2M2H8 2515 aa4.93□□□□□ -1.62
VMA21-201ENST00000330374 PHF5AQ7RTV0 110 aaKnown RBP4.93□□□□□ -1.62
VMA21-201ENST00000330374 RBM12B-AS1Q9P1G2 102 aa4.92□□□□□ -1.62
VMA21-201ENST00000330374 KRTAP16-1A8MUX0 517 aa4.92□□□□□ -1.62
VMA21-201ENST00000330374 CNBPP62633 177 aaKnown RBP4.92□□□□□ -1.62
VMA21-201ENST00000330374 LYSTQ99698 3801 aa4.91□□□□□ -1.62
VMA21-201ENST00000330374 KRTAP11-1Q8IUC1 163 aa4.91□□□□□ -1.62
VMA21-201ENST00000330374 Q8N9P0 234 aaPredicted RBP4.91□□□□□ -1.62
VMA21-201ENST00000330374 KRTAP29-1A8MX34 341 aaPredicted RBP4.9□□□□□ -1.63
VMA21-201ENST00000330374 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
VMA21-201ENST00000330374 C16orf90A8MZG2 172 aa4.88□□□□□ -1.63
VMA21-201ENST00000330374 COA5Q86WW8 74 aa4.88□□□□□ -1.63
VMA21-201ENST00000330374 SPAG11AQ6PDA7 123 aa4.88□□□□□ -1.63
VMA21-201ENST00000330374 A8MWP4 228 aa4.88□□□□□ -1.63
VMA21-201ENST00000330374 IGHV6-1A0A0B4J1U7 121 aa4.88□□□□□ -1.63
VMA21-201ENST00000330374 KRTAP1-5Q9BYS1 174 aa4.87□□□□□ -1.63
VMA21-201ENST00000330374 LCE2BO14633 110 aa4.87□□□□□ -1.63
VMA21-201ENST00000330374 LIMD2Q9BT23 127 aa4.87□□□□□ -1.63
VMA21-201ENST00000330374 LINC00472Q9H8W2 130 aa4.86□□□□□ -1.63
VMA21-201ENST00000330374 UBE2DNLQ8IWF7 75 aa4.85□□□□□ -1.63
VMA21-201ENST00000330374 LCA10Q71F78 164 aa4.85□□□□□ -1.63
VMA21-201ENST00000330374 LCE2CQ5TA81 110 aa4.85□□□□□ -1.63
VMA21-201ENST00000330374 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
VMA21-201ENST00000330374 MMP24-AS1A0A0U1RRL7 71 aa4.84□□□□□ -1.63
VMA21-201ENST00000330374 C9orf163Q8N9P6 203 aa4.84□□□□□ -1.63
VMA21-201ENST00000330374 H3BPC8 53 aa4.82□□□□□ -1.64
VMA21-201ENST00000330374 DNAH1Q9P2D7 4330 aa4.82□□□□□ -1.64
VMA21-201ENST00000330374 KRTAP24-1Q3LI83 254 aa4.82□□□□□ -1.64
VMA21-201ENST00000330374 ANAPC11Q9NYG5 84 aa4.82□□□□□ -1.64
VMA21-201ENST00000330374 C8orf87E5RJ46 101 aa4.81□□□□□ -1.64
VMA21-201ENST00000330374 PANO1I0J062 215 aa4.81□□□□□ -1.64
VMA21-201ENST00000330374 CMYA5Q8N3K9 4069 aa4.81□□□□□ -1.64
VMA21-201ENST00000330374 SPINK6Q6UWN8 80 aa4.8□□□□□ -1.64
VMA21-201ENST00000330374 DNAH9Q9NYC9 4486 aa4.8□□□□□ -1.64
VMA21-201ENST00000330374 LOC101927531A0A1B0GV80 90 aa4.79□□□□□ -1.64
VMA21-201ENST00000330374 K7EIL1 84 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms